RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 CCDC14Q49A88 953 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 DCAF6Q58WW2 860 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 MDH1BQ5I0G3 518 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 ZNF618Q5T7W0 954 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 TRNP1Q6NT89 227 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 RIBC1Q8N443 379 aaPredicted RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 AGAP3Q96P47 875 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 RNF157Q96PX1 679 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 BCO2Q9BYV7 579 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 KLC2Q9H0B6 622 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 RXFP1Q9HBX9 757 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 LGALS13Q9UHV8 139 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 COL11A1P12107 1806 aaPredicted RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 IQANK1A0A1B0GTG1 560 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 CCDC78A2IDD5 438 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 COPEO14579 308 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 CYP2C9P11712 490 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 AMPD1P23109 780 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 MGAT5Q09328 741 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 AP1B1Q10567 949 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 PPIL2Q13356 520 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 PRPF39Q86UA1 669 aaKnown RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 TTC30AQ86WT1 665 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 PYROXD2Q8N2H3 581 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 PLD5Q8N7P1 536 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 GBP7Q8N8V2 638 aaPredicted RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 NAT8LQ8N9F0 302 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 STAMBPL1Q96FJ0 436 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 TIMM13Q9Y5L4 95 aaPredicted RBP10.11□□□□□ -0.79
MSL3-202ENST00000337339 EVPLQ92817 2033 aa10.11□□□□□ -0.79
MSL3-202ENST00000337339 C2CD4BA6NLJ0 364 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CAPN9O14815 690 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 DNAJC8O75937 253 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 RECQL4O94761 1208 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 ABHD2P08910 425 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 BGNP21810 368 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 STIP1P31948 543 aaKnown RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 GNL1P36915 607 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 GRIA1P42261 906 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 ANKRD20A3Q5VUR7 823 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 TWF2Q6IBS0 349 aaKnown RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 CGB2Q6NT52 195 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 DRICH1Q6PGQ1 229 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 BEST2Q8NFU1 509 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 SLC2A14Q8TDB8 520 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 GCOM2Q9BZD3 368 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 CCDC134Q9H6E4 229 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 MANSC1Q9H8J5 431 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CYP3A43Q9HB55 503 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 IL1RAPL1Q9NZN1 696 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 ZFP69BQ9UJL9 534 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CLDN5O00501 218 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 UGT1A9O60656 530 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CYP2F1P24903 491 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 ATICP31939 592 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CDH5P33151 784 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 BOLA3Q53S33 107 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 TAF1BQ53T94 588 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 DENND5BQ6ZUT9 1274 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 OTOAQ7RTW8 1153 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CCDC91Q7Z6B0 441 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 NIPA2Q8N8Q9 360 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 ARMC2Q8NEN0 867 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CMASQ8NFW8 434 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 MCRS1Q96EZ8 462 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 MECRQ9BV79 373 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 RNF39Q9H2S5 420 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 UGT1A7Q9HAW7 530 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 UGT1A10Q9HAW8 530 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 UGT1A8Q9HAW9 530 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 SLC12A4Q9UP95 1085 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 USH1CQ9Y6N9 552 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 PAPSS1O43252 624 aaPredicted RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 MYL3P08590 195 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 SMPD1P17405 629 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CDC25CP30307 473 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 GJA5P36382 358 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 CPA2P48052 419 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 TMPRSS15P98073 1019 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 BEX3Q00994 111 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 RCN2Q14257 317 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 FAM47CQ5HY64 1035 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 HEATR6Q6AI08 1181 aaKnown RBP10.1□□□□□ -0.79
MSL3-202ENST00000337339 CES3Q6UWW8 571 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 VPS52Q8N1B4 723 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 PCDH19Q8TAB3 1148 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 PLCD4Q9BRC7 762 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 ACSS3Q9H6R3 686 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 PCMTD2Q9NV79 361 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 SENP1Q9P0U3 644 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 SLC24A2Q9UI40 661 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 ITGA11Q9UKX5 1188 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 MFHAS1Q9Y4C4 1052 aa10.1□□□□□ -0.79
MSL3-202ENST00000337339 DNAJC25-GNG10A0A024R161 153 aa10.09□□□□□ -0.79
MSL3-202ENST00000337339 TCEA3O75764 348 aa10.09□□□□□ -0.79
MSL3-202ENST00000337339 F7P08709 466 aaPredicted RBP10.09□□□□□ -0.79
MSL3-202ENST00000337339 SLC6A3Q01959 620 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms