RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 PWWP2AQ96N64 755 aa17.71■□□□□ 0.43
DDX41-201ENST00000330503 RNF157Q96PX1 679 aa17.71■□□□□ 0.43
DDX41-201ENST00000330503 TBCBQ99426 244 aa17.71■□□□□ 0.43
DDX41-201ENST00000330503 NCAPGQ9BPX3 1015 aa17.71■□□□□ 0.43
DDX41-201ENST00000330503 PCDH18Q9HCL0 1135 aa17.71■□□□□ 0.43
DDX41-201ENST00000330503 KRT82Q9NSB4 513 aa17.71■□□□□ 0.43
DDX41-201ENST00000330503 APOC4-APOC2K7ER74 178 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 M0QZQ0 153 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 B4GALT3O60512 393 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 APOC2P02655 101 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 ITGB1P05556 798 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 NUDT17P0C025 328 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 FAM200BP0CF97 657 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 PRMT2P55345 433 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 SLC29A2Q14542 456 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 PDK2Q15119 407 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 P3H1Q32P28 736 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 HIBCHQ6NVY1 386 aaPredicted RBP17.71■□□□□ 0.42
DDX41-201ENST00000330503 NPNTQ6UXI9 565 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 SLC24A5Q71RS6 500 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 FAM35AQ86V20 835 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 DEFB106AQ8N104 65 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 ZMIZ2Q8NF64 920 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 HASPINQ8TF76 798 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 ATP6V1G3Q96LB4 118 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 UROC1Q96N76 676 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 MAGEB5Q9BZ81 275 aa17.71■□□□□ 0.42
DDX41-201ENST00000330503 CEP350Q5VT06 3117 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 MDM4O15151 490 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 AP1G2O75843 785 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 EOMESO95936 686 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 ODC1P11926 461 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 MATKP42679 507 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 ARHGEF6Q15052 776 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 CLLU1OSQ5K130 101 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 DCLRE1AQ6PJP8 1040 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 CCDC25Q86WR0 208 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 PQLC3Q8N755 202 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 BBOF1Q8ND07 529 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 SH3TC2Q8TF17 1288 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 RSPH1Q8WYR4 309 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 KCNK16Q96T55 309 aa17.7■□□□□ 0.42
DDX41-201ENST00000330503 MAK16Q9BXY0 300 aaKnown RBP17.7■□□□□ 0.42
DDX41-201ENST00000330503 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.7■□□□□ 0.421e-5■■■□□ 18
DDX41-201ENST00000330503 RIPK2O43353 540 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 KRT81Q14533 505 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 GPNMBQ14956 572 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 ANKRD20A8PQ5CZ79 823 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 ERMARDQ5T6L9 678 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 FAM171BQ6P995 826 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 ZNF280BQ86YH2 543 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 ACBD6Q9BR61 282 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 LRRC4Q9HBW1 653 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 BRCA2P51587 3418 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 HHLA1C9JL84 531 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 SGK1O00141 431 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 DNALI1O14645 258 aaPredicted RBP17.69■□□□□ 0.42
DDX41-201ENST00000330503 NRP1O14786 923 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 DAB1O75553 588 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 DDHD2O94830 711 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 MYZAPP0CAP1 466 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 PCSK1P29120 753 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 L1CAMP32004 1257 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 TKTL1P51854 596 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 GDF10P55107 478 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 EIF3BP55884 814 aaKnown RBP17.69■□□□□ 0.42
DDX41-201ENST00000330503 YWHAZP63104 245 aaKnown RBP17.69■□□□□ 0.42
DDX41-201ENST00000330503 GPS1Q13098 491 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 OTUD1Q5VV17 481 aaPredicted RBP17.69■□□□□ 0.42
DDX41-201ENST00000330503 DENND2CQ68D51 928 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 HFE2Q6ZVN8 426 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 GPRIN1Q7Z2K8 1008 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 MAP7D3Q8IWC1 876 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 UNC45BQ8IWX7 931 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 PCDH19Q8TAB3 1148 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 SPATA18Q8TC71 538 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 CCHCR1Q8TD31 782 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 NT5C3BQ969T7 300 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 PKMYT1Q99640 499 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 RHOBTB2Q9BYZ6 727 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 TSC2P49815 1807 aa17.69■□□□□ 0.42
DDX41-201ENST00000330503 YY1P25490 414 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 EIF3EP60228 445 aaKnown RBP17.68■□□□□ 0.42
DDX41-201ENST00000330503 PITX1P78337 314 aaPredicted RBP17.68■□□□□ 0.42
DDX41-201ENST00000330503 TFDP2Q14188 446 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 SLC25A52Q3SY17 297 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 RAB41Q5JT25 222 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 TRMT10CQ7L0Y3 403 aaKnown RBP17.68■□□□□ 0.42
DDX41-201ENST00000330503 STRADAQ7RTN6 431 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 BNIPLQ7Z465 357 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 LRRTM3Q86VH5 581 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 METTL23Q86XA0 190 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 CCDC185Q8N715 623 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 PLD5Q8N7P1 536 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 SUSD3Q96L08 255 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 UNC93B1Q9H1C4 597 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 CDC42EP4Q9H3Q1 356 aaKnown RBP17.68■□□□□ 0.42
DDX41-201ENST00000330503 PCDH9Q9HC56 1237 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 TMLHEQ9NVH6 421 aa17.68■□□□□ 0.42
DDX41-201ENST00000330503 DNAJC17Q9NVM6 304 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms