RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 SALL1Q9NSC2 1324 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 RAP1GDS1P52306 607 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 DMC1Q14565 340 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 CNGA3Q16281 694 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 MEI1Q5TIA1 1274 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 SPOCD1Q6ZMY3 1216 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 ANO5Q75V66 913 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 NT5DC3Q86UY8 548 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 GPC2Q8N158 579 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 A1CFQ9NQ94 594 aaKnown RBP10.52□□□□□ -0.73
CHD3-201ENST00000330494 WBP4O75554 376 aaKnown RBP10.52□□□□□ -0.73
CHD3-201ENST00000330494 PTK6Q13882 451 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 FSCN1Q16658 493 aaKnown RBP10.52□□□□□ -0.73
CHD3-201ENST00000330494 CBWD6Q4V339 395 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 CBWD3Q5JTY5 395 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 CBWD5Q5RIA9 395 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 AADACL2Q6P093 401 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 CLEC4FQ8N1N0 589 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 VGLL2Q8N8G2 317 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 DTNBP1Q96EV8 351 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 OLFM3Q96PB7 478 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 GRID1Q9ULK0 1009 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 HEATR9A2RTY3 570 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 C2orf81A6NN90 581 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 SERPINI2O75830 405 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 SUPT7LO94864 414 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 TRIM16O95361 564 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 KRT75O95678 551 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 POU6F1Q14863 301 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 ZNF229Q9UJW7 825 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 DISP2A7MBM2 1401 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 USP17L7P0C7H9 530 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 OVOS1Q6IE37 1185 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 COLGALT1Q8NBJ5 622 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 CALML6Q8TD86 181 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 ZFYVE19Q96K21 471 aa10.52□□□□□ -0.73
CHD3-201ENST00000330494 B2RBV5 119 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 ANXA9O76027 345 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 PYGLP06737 847 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 PTPRAP18433 802 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 RARS2Q5T160 578 aaKnown RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 SLC44A2Q8IWA5 706 aaPredicted RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 ELOA2Q8IYF1 753 aaPredicted RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 SLC5A5Q92911 643 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 TEX12Q9BXU0 123 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 ATXN3LQ9H3M9 355 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 ZSCAN5CA6NGD5 496 aaPredicted RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 IRF6O14896 467 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 PGK1P00558 417 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 BDNFP23560 247 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 PSEN2P49810 448 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 SCNN1BP51168 640 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 AGBL2Q5U5Z8 902 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 NYAP1Q6ZVC0 841 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 CCDC60Q8IWA6 550 aaPredicted RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 TRIM48Q8IWZ4 208 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 TRPM4Q8TD43 1214 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 MTBPQ96DY7 904 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 CHCHD3Q9NX63 227 aaKnown RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 RHOCP08134 193 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 LHX1P48742 406 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 NFIL3Q16649 462 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 EML3Q32P44 896 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 STRA8Q7Z7C7 330 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 ARID3BQ8IVW6 561 aaPredicted RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 MMGT1Q8N4V1 131 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 SNRNP27Q8WVK2 155 aaKnown RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 RUBCNQ92622 972 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 ABHD8Q96I13 439 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 TRIM45Q9H8W5 580 aaPredicted RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 PPP2R3BQ9Y5P8 575 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 GOLGA8TH3BQL2 631 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 CKBP12277 381 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 KLRC2P26717 231 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 EPHB3P54753 998 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 OXCT1P55809 520 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 CXCL17Q6UXB2 119 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 TRPM8Q7Z2W7 1104 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 LRRN4Q8WUT4 740 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 SEMA4DQ92854 862 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 SYT15Q9BQS2 421 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 MT-CO1P00395 513 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 RAG1P15918 1043 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 TMED10P49755 219 aaKnown RBP10.51□□□□□ -0.73
CHD3-201ENST00000330494 BMPR2Q13873 1038 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 LINC00523Q86TU6 105 aa10.51□□□□□ -0.73
CHD3-201ENST00000330494 AMPD1P23109 780 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 SP100P23497 879 aaPredicted RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 FDFT1P37268 417 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 BST2Q10589 180 aaKnown RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 PWP1Q13610 501 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 SLC39A12Q504Y0 691 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 AARS2Q5JTZ9 985 aaKnown RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 ZNF606Q8WXB4 792 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 BLVRAP53004 296 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 GEMP55040 296 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 SLC2A14Q8TDB8 520 aa10.5□□□□□ -0.73
CHD3-201ENST00000330494 SRPK1Q96SB4 655 aaKnown RBP10.5□□□□□ -0.73
CHD3-201ENST00000330494 DUSP9Q99956 384 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms