RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 ELMO3Q96BJ8 720 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 TWNKQ96RR1 684 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 CYLDQ9NQC7 956 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 TLR8Q9NR97 1041 aaKnown RBP14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 SEMA4GQ9NTN9 838 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 SMPD4Q9NXE4 827 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 GMIPQ9P107 970 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 CHORDC1Q9UHD1 332 aaPredicted RBP14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 SCML2Q9UQR0 700 aa14.36□□□□□ -0.11
GTF3C6-201ENST00000329970 ABCA7Q8IZY2 2146 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 HHLA1C9JL84 531 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 AXIN1O15169 862 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 CETN3O15182 167 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 HOXC11O43248 304 aaPredicted RBP14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 EPN2O95208 641 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 CHRM1P11229 460 aaPredicted RBP14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 HOXC13P31276 330 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 MAP3K7CLP57077 242 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 ZNF658Q5TYW1 1059 aaPredicted RBP14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 PRR23CQ6ZRP0 262 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 ELOA2Q8IYF1 753 aaPredicted RBP14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 C12orf29Q8N999 325 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 FBXL13Q8NEE6 735 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 ENGASEQ8NFI3 743 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 NETO1Q8TDF5 533 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 WHAMMQ8TF30 809 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 CYFIP2Q96F07 1278 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 TIGD1Q96MW7 591 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 PNKPQ96T60 521 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 CCSER2Q9H7U1 834 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 FAM49BQ9NUQ9 324 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 CDV3Q9UKY7 258 aaKnown RBP14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 MMP17Q9ULZ9 603 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 PCDHGA5Q9Y5G8 931 aa14.35□□□□□ -0.11
GTF3C6-201ENST00000329970 SPTBN2O15020 2390 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 TNRC6BQ9UPQ9 1833 aaKnown RBP14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 NCOR2Q9Y618 2525 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 SLC16A3O15427 465 aaKnown RBP14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 TLR5O60602 858 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 CCDC192P0DO97 292 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 EPB41P11171 864 aaKnown RBP14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 ADH5P11766 374 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 MXI1P50539 228 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 ATXN1P54253 815 aaKnown RBP14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 GAD2Q05329 585 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 PNOCQ13519 176 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 PREPLQ4J6C6 727 aaPredicted RBP14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 HTR3DQ70Z44 454 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 C11orf74Q86VG3 221 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 RASSF3Q86WH2 238 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 ETFBKMTQ8IXQ9 262 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 KCNV2Q8TDN2 545 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 HHIPQ96QV1 700 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 RAB20Q9NX57 234 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 COQ4Q9Y3A0 265 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 SH3BP1Q9Y3L3 701 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 CEP192Q8TEP8 1941 aa14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 CNOT1A5YKK6 2376 aaKnown RBP14.34□□□□□ -0.11
GTF3C6-201ENST00000329970 SLC30A4O14863 429 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 GREM1O60565 184 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 APODP05090 189 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 GRIA2P42262 883 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 PRCPP42785 496 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 TNFRSF4P43489 277 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 PXNP49023 591 aaPredicted RBP14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 PSEN1P49768 467 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 KIF11P52732 1056 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 LIMK1P53667 647 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 FKBP3Q00688 224 aaKnown RBP14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 LRRC63Q05C16 580 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 ORC1Q13415 861 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 GPRIN1Q7Z2K8 1008 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 CCDC186Q7Z3E2 898 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 PHTF2Q8N3S3 785 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 CNOT6LQ96LI5 555 aaKnown RBP14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 KLF16Q9BXK1 252 aaPredicted RBP14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 DUSP16Q9BY84 665 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 UBXN6Q9BZV1 441 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 USP3Q9Y6I4 520 aa14.33□□□□□ -0.12
GTF3C6-201ENST00000329970 PI4KAP42356 2102 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 GOLGA6L4A6NEF3 574 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 KAT7O95251 611 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 SMC2O95347 1197 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 ZNF806P0C7X5 589 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 ADORA2BP29275 332 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 ATP5C1P36542 298 aaKnown RBP14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 PPP1R2P41236 205 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 KIR2DL1P43626 348 aaPredicted RBP14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 DGKEP52429 567 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 GOLGA8FQ08AF8 430 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 GOLGA8DPQ0D2H9 430 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 CRY1Q16526 586 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 PLK5Q496M5 336 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 PLA2G2CQ5R387 149 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 LY6G5CQ5SRR4 150 aa14.32□□□□□ -0.12
GTF3C6-201ENST00000329970 PPP1R26Q5T8A7 1209 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms