RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 PLD5Q8N7P1 536 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 NT5C3BQ969T7 300 aa12.52□□□□□ -0.4
NCL-201ENST00000322723 ACSF2Q96CM8 615 aaPredicted RBP12.52□□□□□ -0.4
NCL-201ENST00000322723 PARK7Q99497 189 aaKnown RBP12.52□□□□□ -0.4
NCL-201ENST00000322723 EIF2AQ9BY44 585 aaKnown RBP12.52□□□□□ -0.4
NCL-201ENST00000322723 E5RJQ4 531 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 CST8O60676 142 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 SLC6A3Q01959 620 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 PMF1Q6P1K2 205 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 SLC30A9Q6PML9 568 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 UNC45BQ8IWX7 931 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 RNF157Q96PX1 679 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 SLC5A4Q9NY91 659 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 SENP1Q9P0U3 644 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 THSD7BQ9C0I4 1608 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 CSDE1O75534 798 aaKnown RBP12.52□□□□□ -0.41
NCL-201ENST00000322723 SLCO1A2P46721 670 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 ORC1Q13415 861 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 XRCC4Q13426 336 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 SEPT7Q16181 437 aaKnown RBP12.52□□□□□ -0.41
NCL-201ENST00000322723 ZNF670Q9BS34 389 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 MTMR10Q9NXD2 777 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 FLRT1Q9NZU1 646 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.41
NCL-201ENST00000322723 PAPSS1O43252 624 aaPredicted RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 TOMM70O94826 608 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 ATF7P17544 494 aaPredicted RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 LRPAP1P30533 357 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 WDR4P57081 412 aaKnown RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 IGBP1P78318 339 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 SH3PXD2AQ5TCZ1 1133 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 OTUD1Q5VV17 481 aaPredicted RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 SLC26A9Q7LBE3 791 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 ZNF148Q9UQR1 794 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 TEX264Q9Y6I9 313 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 KIF3CO14782 793 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 CHADO15335 359 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 KRT19P08727 400 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 MUM1Q2TAK8 710 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 GOLGA7BQ2TAP0 167 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 ZNF513Q8N8E2 541 aaPredicted RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 DCAKDQ8WVC6 231 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 NLRP7Q8WX94 980 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 ADPGKQ9BRR6 497 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 PRDM16Q9HAZ2 1276 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 NOD2Q9HC29 1040 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 TDRD15B5MCY1 1934 aaKnown RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 TCRBV7S3A2A0A539 114 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 CCT8L1PA6NM43 557 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 CTCFP49711 727 aaPredicted RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 HDAC4P56524 1084 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 GAD2Q05329 585 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 CCDC15Q0P6D6 951 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 KAZNQ674X7 775 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
NCL-201ENST00000322723 SESTD1Q86VW0 696 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 ANKLE1Q8NAG6 615 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 C9orf72Q96LT7 481 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 PCDH18Q9HCL0 1135 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
NCL-201ENST00000322723 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.51□□□□□ -0.41
NCL-201ENST00000322723 GOLGA8SH3BPF8 625 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 CD19P15391 556 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 TAC1P20366 129 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 WARSP23381 471 aaKnown RBP12.5□□□□□ -0.41
NCL-201ENST00000322723 STIP1P31948 543 aaKnown RBP12.5□□□□□ -0.41
NCL-201ENST00000322723 NOTUMQ6P988 496 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 CENPUQ71F23 418 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 LONP2Q86WA8 852 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 GCOM2Q9BZD3 368 aaPredicted RBP12.5□□□□□ -0.41
NCL-201ENST00000322723 GRID1Q9ULK0 1009 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 SF3B1O75533 1304 aaKnown RBP eCLIP12.5□□□□□ -0.413e-10■■■■■ 30.3
NCL-201ENST00000322723 FGFR1P11362 822 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 SMTNL2Q2TAL5 461 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 TMEM40Q8WWA1 233 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 SNTG2Q9NY99 539 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 ANP32DO95626 131 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 IL1BP01584 269 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 PREPLQ4J6C6 727 aaPredicted RBP12.5□□□□□ -0.41
NCL-201ENST00000322723 BOLA3Q53S33 107 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 KCNT1Q5JUK3 1230 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
NCL-201ENST00000322723 UBA3Q8TBC4 463 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 HEXIM2Q96MH2 286 aaKnown RBP12.5□□□□□ -0.41
NCL-201ENST00000322723 OLFM3Q96PB7 478 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 FRMD8Q9BZ67 464 aaPredicted RBP12.5□□□□□ -0.41
NCL-201ENST00000322723 ZWILCHQ9H900 591 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 MLXIPLQ9NP71 852 aa12.5□□□□□ -0.41
NCL-201ENST00000322723 SPTLC1O15269 473 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 PFDN1O60925 122 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 FOXN2P32314 431 aa12.49□□□□□ -0.41
NCL-201ENST00000322723 SPDYAQ5MJ70 313 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms