RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 FGFR1P11362 822 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 STIP1P31948 543 aaKnown RBP10.94□□□□□ -0.66
COL3A1-202ENST00000317840 PPP2R5DQ14738 602 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 SLC30A9Q6PML9 568 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 MTMR14Q8NCE2 650 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 TTC16Q8NEE8 873 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 CHST13Q8NET6 341 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 ATP2A3Q93084 1043 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 HAPLN2Q9GZV7 340 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 MIS12Q9H081 205 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 WWP1Q9H0M0 922 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 COX16Q9P0S2 106 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 BTBD7Q9P203 1132 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 ANGPTL2Q9UKU9 493 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 TTLL13PA6NNM8 815 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 APOC4-APOC2K7ER74 178 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 PPP1R12AO14974 1030 aaPredicted RBP10.94□□□□□ -0.66
COL3A1-202ENST00000317840 APOC2P02655 101 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 ITGB3P05106 788 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 P4HA1P13674 534 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 SERPINB6P35237 376 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 SNAPC2Q13487 334 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 TTC39BQ5VTQ0 682 aaPredicted RBP10.94□□□□□ -0.66
COL3A1-202ENST00000317840 LRRC74BQ6ZQY2 392 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 WDR75Q8IWA0 830 aaKnown RBP10.94□□□□□ -0.66
COL3A1-202ENST00000317840 MTBPQ96DY7 904 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 SERAC1Q96JX3 654 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 CPXM1Q96SM3 734 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 SEPT10Q9P0V9 454 aa10.94□□□□□ -0.66
COL3A1-202ENST00000317840 SIGLEC16A6NMB1 481 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 E7ENQ6 273 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 OPHN1O60890 802 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 CXCL8P10145 99 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 NCF2P19878 526 aaPredicted RBP10.93□□□□□ -0.66
COL3A1-202ENST00000317840 HUNKP57058 714 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 C15orf59Q2T9L4 293 aaPredicted RBP10.93□□□□□ -0.66
COL3A1-202ENST00000317840 ACSBG2Q5FVE4 666 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 BANPQ8N9N5 519 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 PRR11Q96HE9 360 aaPredicted RBP10.93□□□□□ -0.66
COL3A1-202ENST00000317840 TRIM4Q9C037 500 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 NDE1Q9NXR1 346 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 TAS2R1Q9NYW7 299 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 WDR35Q9P2L0 1181 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 CPA4Q9UI42 421 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 CYB561D2O14569 222 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 ABL2P42684 1182 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 SLC34A1Q06495 639 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 BST1Q10588 318 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 RBBP5Q15291 538 aaKnown RBP10.93□□□□□ -0.66
COL3A1-202ENST00000317840 PPP4R1Q8TF05 950 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 ANKRD27Q96NW4 1050 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 RRAGCQ9HB90 399 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 PDGFCQ9NRA1 345 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 NOD1Q9Y239 953 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 WNK3Q9BYP7 1800 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 A6NJR5 290 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 PSMG1O95456 288 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 STX3Q13277 289 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 ATF7IP2Q5U623 682 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 ANO7Q6IWH7 933 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 EFCAB12Q6NXP0 572 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 NAT8LQ8N9F0 302 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 ZNF398Q8TD17 642 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 RXFP2Q8WXD0 754 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 MIPEPQ99797 713 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 PIH1D1Q9NWS0 290 aaKnown RBP10.93□□□□□ -0.66
COL3A1-202ENST00000317840 EURLQ9NYK6 297 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 PAK5Q9P286 719 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 LRCH1Q9Y2L9 728 aa10.93□□□□□ -0.66
COL3A1-202ENST00000317840 LOC100653049A0A140TA62 436 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 KRT34O76011 436 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 RGS20O76081 388 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 GNAT1P11488 350 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 SDC4P31431 198 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 SP2Q02086 613 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 PTPN11Q06124 597 aaPredicted RBP10.92□□□□□ -0.66
COL3A1-202ENST00000317840 RGS9BPQ6ZS82 235 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 POLNQ7Z5Q5 900 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 IGDCC3Q8IVU1 814 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 AGR3Q8TD06 166 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 SLC26A7Q8TE54 656 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 TMEM174Q8WUU8 243 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 CLPTM1LQ96KA5 538 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 DHX35Q9H5Z1 703 aaKnown RBP10.92□□□□□ -0.66
COL3A1-202ENST00000317840 ZNF395Q9H8N7 513 aaPredicted RBP10.92□□□□□ -0.66
COL3A1-202ENST00000317840 ZNF214Q9UL59 606 aaPredicted RBP10.92□□□□□ -0.66
COL3A1-202ENST00000317840 G3BP2Q9UN86 482 aaKnown RBP10.92□□□□□ -0.66
COL3A1-202ENST00000317840 ATAD5Q96QE3 1844 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 CCDC160A6NGH7 325 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 APOL1O14791 398 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 UBA1P22314 1058 aaKnown RBP10.92□□□□□ -0.66
COL3A1-202ENST00000317840 RBL1P28749 1068 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 SLC18A1P54219 525 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 SESN2P58004 480 aaPredicted RBP10.92□□□□□ -0.66
COL3A1-202ENST00000317840 NBPF20Q3BBV1 942 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 RINLQ6ZS11 566 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 UCMAQ8WVF2 138 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 ATXN7L3BQ96GX2 97 aa10.92□□□□□ -0.66
COL3A1-202ENST00000317840 DDX50Q9BQ39 737 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms