RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 PYGLP06737 847 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 RARGP13631 454 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 IGFBP6P24592 240 aaPredicted RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 PON1P27169 355 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 GALCP54803 685 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 PPP3CAQ08209 521 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 AGGF1Q8N302 714 aaeCLIP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 B4GALNT2Q8NHY0 566 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 RFFLQ8WZ73 363 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 ALG3Q92685 438 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 ARHGEF2Q92974 986 aaKnown RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 ANKRD36BP1Q96IX9 119 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 TMEM237Q96Q45 408 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 NUDCD1Q96RS6 583 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 MKNK1Q9BUB5 465 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 METTL14Q9HCE5 456 aaKnown RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 KLHL14Q9P2G3 628 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 MRPL42Q9Y6G3 142 aaKnown RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 TRIP11Q15643 1979 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 A0A1B0GVG6 124 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 CA3P07451 260 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 KCNE1P15382 129 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 BMP8BP34820 402 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 MPP2Q14168 576 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 TSNAXIP1Q2TAA8 658 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 SPRED2Q7Z698 418 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 USP37Q86T82 979 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 VPS36Q86VN1 386 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 FIBCD1Q8N539 461 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 ANKRD42Q8N9B4 389 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 PHC3Q8NDX5 983 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 BEST2Q8NFU1 509 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 GDAP1Q8TB36 358 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 LNX1Q8TBB1 728 aaPredicted RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 TMC2Q8TDI7 906 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 DNAJC9Q8WXX5 260 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 CGRRF1Q99675 332 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 ROPN1BQ9BZX4 212 aaPredicted RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 MYLK2Q9H1R3 596 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 NRDE2Q9H7Z3 1164 aa13.28□□□□□ -0.28
VANGL1-201ENST00000310260 ROPN1Q9HAT0 212 aaPredicted RBP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.28□□□□□ -0.28
VANGL1-201ENST00000310260 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.27□□□□□ -0.28
VANGL1-201ENST00000310260 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.27□□□□□ -0.28
VANGL1-201ENST00000310260 ITGB3P05106 788 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 ALDH7A1P49419 539 aaKnown RBP13.27□□□□□ -0.28
VANGL1-201ENST00000310260 CLCNKBP51801 687 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 SURF1Q15526 300 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 FOXB2Q5VYV0 432 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 TTC27Q6P3X3 843 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 LRRC43Q8N309 656 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 SLC35G2Q8TBE7 412 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 TMEM174Q8WUU8 243 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 ZNF689Q96CS4 500 aaPredicted RBP13.27□□□□□ -0.28
VANGL1-201ENST00000310260 TRIM4Q9C037 500 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 SIX2Q9NPC8 291 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 SLC38A7Q9NVC3 462 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 PCYOX1Q9UHG3 505 aa13.27□□□□□ -0.28
VANGL1-201ENST00000310260 CHD9Q3L8U1 2897 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 CITO14578 2027 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 PPEF2O14830 753 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 ALDH2P05091 517 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.29
VANGL1-201ENST00000310260 CHRNA3P32297 505 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 LMNB2Q03252 620 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 TRPC3Q13507 836 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 XKR4Q5GH76 650 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 ARMC3Q5W041 872 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 SV2AQ7L0J3 742 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 WDR49Q8IV35 697 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 PRELID2Q8N945 189 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 UCMAQ8WVF2 138 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 SLC35C1Q96A29 364 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 DDX23Q9BUQ8 820 aaKnown RBP13.27□□□□□ -0.29
VANGL1-201ENST00000310260 MRPL9Q9BYD2 267 aaKnown RBP13.27□□□□□ -0.29
VANGL1-201ENST00000310260 DLGAP2Q9P1A6 1054 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 CHD7Q9P2D1 2997 aa13.27□□□□□ -0.29
VANGL1-201ENST00000310260 UBQLN1Q9UMX0 589 aaKnown RBP13.27□□□□□ -0.29
VANGL1-201ENST00000310260 YBX2Q9Y2T7 364 aaKnown RBP13.27□□□□□ -0.29
VANGL1-201ENST00000310260 FOXO6A8MYZ6 492 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 I3L4J1 428 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 SMAPO00193 183 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 MAPK13O15264 365 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 LRRN2O75325 713 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 B3GAT3O94766 335 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 ARHGEF15O94989 841 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 CST3P01034 146 aaPredicted RBP13.26□□□□□ -0.29
VANGL1-201ENST00000310260 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
VANGL1-201ENST00000310260 BCAR1P56945 870 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 TUSC3Q13454 348 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 ZBTB6Q15916 424 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 EXOC3L4Q17RC7 722 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 CBWD6Q4V339 395 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 CBWD3Q5JTY5 395 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 CBWD5Q5RIA9 395 aa13.26□□□□□ -0.29
VANGL1-201ENST00000310260 TDRD10Q5VZ19 366 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms