RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 OTUB2Q96DC9 234 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 TOE1Q96GM8 510 aaKnown RBP12.62□□□□□ -0.39
SMIM4-201ENST00000307106 GABRG3Q99928 467 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 REEP2Q9BRK0 252 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 GPR174Q9BXC1 333 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 PCDHB6Q9Y5E3 794 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 SNX9Q9Y5X1 595 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 ATMQ13315 3056 aa12.62□□□□□ -0.39
SMIM4-201ENST00000307106 CAPN8A6NHC0 703 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 LAD1O00515 517 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 TNFSF14O43557 240 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 TLX3O43711 291 aaPredicted RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 TRAK2O60296 914 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 FAM13AO94988 1023 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 IL18RAPO95256 599 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 PSMC1P62191 440 aaKnown RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 NOP14P78316 857 aaKnown RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 TFAMQ00059 246 aaKnown RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 POU5F1Q01860 360 aaKnown RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 TAF10Q12962 218 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 SUZ12Q15022 739 aaKnown RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 PTPRNQ16849 979 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 DCAF12L1Q5VU92 463 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 SLFN12LQ6IEE8 588 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 DHRS13Q6UX07 377 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 CRELD2Q6UXH1 353 aaPredicted RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 KCTD17Q8N5Z5 321 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 TOP6BLQ8N6T0 577 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 SPHK2Q9NRA0 654 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 GDAP2Q9NXN4 497 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 WSB2Q9NYS7 404 aaPredicted RBP12.61□□□□□ -0.39
SMIM4-201ENST00000307106 SH3BP1Q9Y3L3 701 aa12.61□□□□□ -0.39
SMIM4-201ENST00000307106 MGAQ8IWI9 3026 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 TEX51A0A1B0GUA7 166 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 TRIM66O15016 1216 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 RRP8O43159 456 aaKnown RBP12.6□□□□□ -0.39
SMIM4-201ENST00000307106 PLCG1P19174 1290 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 PRPHP41219 470 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 TOB1P50616 345 aaPredicted RBP12.6□□□□□ -0.39
SMIM4-201ENST00000307106 GTF2BQ00403 316 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 CYP27A1Q02318 531 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 SEMG2Q02383 582 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 ST3GAL1Q11201 340 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 SCARA3Q6AZY7 606 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 GRAMD4Q6IC98 578 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 GPR155Q7Z3F1 870 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 TMEM25Q86YD3 366 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 BBS7Q8IWZ6 715 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 LRRC52Q8N7C0 313 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 C1orf127Q8N9H9 656 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 CADM4Q8NFZ8 388 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 SCFD1Q8WVM8 642 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 CDK5RAP3Q96JB5 506 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 SLITRK1Q96PX8 696 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 CRTAC1Q9NQ79 661 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 DNAJC17Q9NVM6 304 aaKnown RBP12.6□□□□□ -0.39
SMIM4-201ENST00000307106 STYXL1Q9Y6J8 313 aa12.6□□□□□ -0.39
SMIM4-201ENST00000307106 A0A1B0GVT2 93 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 F8VP50 259 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 KRT19P08727 400 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 LMO2P25791 158 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 ABCD1P33897 745 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 ZNF131P52739 623 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 WNT7BP56706 349 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 MYO1EQ12965 1108 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 MAPRE1Q15691 268 aaKnown RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 SOWAHAQ2M3V2 549 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 C6orf118Q5T5N4 469 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 TDRD10Q5VZ19 366 aaKnown RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 PCSK4Q6UW60 755 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 TMPRSS12Q86WS5 348 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 CSGALNACT2Q8N6G5 542 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 ENGASEQ8NFI3 743 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 CACTINQ8WUQ7 758 aaKnown RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 POMGNT1Q8WZA1 660 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 PCED1BQ96HM7 432 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 ZHX3Q9H4I2 956 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 CLMPQ9H6B4 373 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 EIF2B4Q9UI10 523 aaKnown RBP12.59□□□□□ -0.39
SMIM4-201ENST00000307106 CDH9Q9ULB4 789 aa12.59□□□□□ -0.39
SMIM4-201ENST00000307106 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 WASH3PC4AMC7 463 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 PRRT4C9JH25 899 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 GFRA2O00451 464 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 ARHGAP6O43182 974 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 COCHO43405 550 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 GRK6P43250 576 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
SMIM4-201ENST00000307106 TMEM119Q4V9L6 283 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 FBXO18Q8NFZ0 1043 aa12.58□□□□□ -0.4
SMIM4-201ENST00000307106 CXorf38Q8TB03 319 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms