RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 TOR4AQ9NXH8 423 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 PRKAR2AP13861 404 aaKnown RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 CLEC4GQ6UXB4 293 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 PIK3C2GO75747 1445 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 INPP4BO15327 924 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 RPS6KA3P51812 740 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 ZNF605Q86T29 641 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 USP13Q92995 863 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-201ENST00000306085 EPB41L4BQ9H329 900 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 OSGEPL1Q9H4B0 414 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 PAK5Q9P286 719 aa13.8□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L15C9J2P7 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L13C9JLJ4 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L11C9JVI0 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L18D6R9N7 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L22D6RA61 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L17D6RBQ6 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L19D6RCP7 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L20D6RJB6 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 STX16-NPEPL1H3BU86 382 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 STX16O14662 325 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 PDGFRAP16234 1089 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 MAPK9P45984 424 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L24Q0WX57 530 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 USP17L6PQ6QN14 398 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 RIPOR1Q6ZS17 1223 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 DYRK1BQ9Y463 629 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 C4orf46Q504U0 113 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 MZT2AQ6P582 158 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 ERICH5Q6P6B1 374 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 GDPD5Q8WTR4 605 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 KLHL28Q9NXS3 571 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
TRIM56-201ENST00000306085 FANCAO15360 1455 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 NEDD4P46934 1319 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 UPP2O95045 317 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 TMEM63BQ5T3F8 832 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 KCNB2Q92953 911 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 FAM120BQ96EK7 910 aaKnown RBP13.79□□□□□ -0.2
TRIM56-201ENST00000306085 B3GALT6Q96L58 329 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 NEK5Q6P3R8 708 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 SPPL2AQ8TCT8 520 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 ZSWIM5Q9P217 1185 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 ZNF432O94892 652 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 NUMBP49757 651 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 EPS8Q12929 822 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 TGM3Q08188 693 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 ASNSP08243 561 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 SEC24CP53992 1094 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 DCAF4Q8WV16 495 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 TEX13BQ9BXU2 312 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 GPRC5DQ9NZD1 345 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 SNX12Q9UMY4 172 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 PLXNC1O60486 1568 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 CBFA2T3O75081 653 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 TNFAIP8O95379 198 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 MYBPC2Q14324 1141 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 DENND5BQ6ZUT9 1274 aa13.79□□□□□ -0.2
TRIM56-201ENST00000306085 ATP5F1P24539 256 aaPredicted RBP13.79□□□□□ -0.2
TRIM56-201ENST00000306085 CHORDC1Q9UHD1 332 aaPredicted RBP13.79□□□□□ -0.2
TRIM56-201ENST00000306085 PSMD14O00487 310 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 GSTM5P46439 218 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 SCTRP47872 440 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 SNX17Q15036 470 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 QPRTQ15274 297 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 PTGISQ16647 500 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 CCDC33Q8N5R6 958 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 RFT1Q96AA3 541 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 KATNAL1Q9BW62 490 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 RAVER2Q9HCJ3 691 aaKnown RBP13.78□□□□□ -0.2
TRIM56-201ENST00000306085 CHST12Q9NRB3 414 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.78□□□□□ -0.24e-8■■□□□ 14.4
TRIM56-201ENST00000306085 TBC1D24Q9ULP9 559 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 GH2P01242 217 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 ERCC2P18074 760 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 PTGER2P43116 358 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 CORO7P57737 925 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 MPP2Q14168 576 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 EEF1AKMT1Q8WVE0 214 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 BPIFA3Q9BQP9 254 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 ZNF579Q8NAF0 562 aaKnown RBP13.78□□□□□ -0.2
TRIM56-201ENST00000306085 SMYD1Q8NB12 490 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 PRCCQ92733 491 aaPredicted RBP13.78□□□□□ -0.2
TRIM56-201ENST00000306085 ABCB10Q9NRK6 738 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 ENOPH1Q9UHY7 261 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 NPHP3-ACAD11A0A0J9YXS1 232 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 CD2BP2O95400 341 aaKnown RBP13.78□□□□□ -0.2
TRIM56-201ENST00000306085 CCDC36Q8IYA8 594 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 RIBC1Q8N443 379 aaPredicted RBP13.78□□□□□ -0.2
TRIM56-201ENST00000306085 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 NR1D2Q14995 579 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 HAVCR1Q96D42 359 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 ZHX2Q9Y6X8 837 aa13.78□□□□□ -0.2
TRIM56-201ENST00000306085 RRN3P2A6NIE6 340 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms