RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 TRAF7Q6Q0C0 670 aa15.15■□□□□ 0.02
SHCBP1-201ENST00000303383 SPATA18Q8TC71 538 aa15.15■□□□□ 0.02
SHCBP1-201ENST00000303383 UBXN6Q9BZV1 441 aa15.15■□□□□ 0.02
SHCBP1-201ENST00000303383 RAB6CQ9H0N0 254 aa15.15■□□□□ 0.02
SHCBP1-201ENST00000303383 SAE1Q9UBE0 346 aaPredicted RBP15.15■□□□□ 0.02
SHCBP1-201ENST00000303383 MATKP42679 507 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 PMS2P54278 862 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 CAV1Q03135 178 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 MMRN1Q13201 1228 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 INTS6LQ5JSJ4 861 aaKnown RBP15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 PAQR9Q6ZVX9 377 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 ZNF280BQ86YH2 543 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 KCTD13Q8WZ19 329 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 P3H4Q92791 437 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 SUSD3Q96L08 255 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 SNRNP25Q9BV90 132 aaKnown RBP15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 FRMD8P1Q9BZ68 369 aaPredicted RBP15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 ULBP1Q9BZM6 244 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 TSPYL1Q9H0U9 437 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 ZDHHC18Q9NUE0 388 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 GOLGA6CA6NDK9 693 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 GOLGA6DP0CG33 693 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 BDNFP23560 247 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 NDUFV1P49821 464 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 ARSEP51690 589 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 SKIDA1Q1XH10 827 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 ERMARDQ5T6L9 678 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 DENND2CQ68D51 928 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 SPATA2LQ8IUW3 424 aaPredicted RBP15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 KCNK16Q96T55 309 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 TBC1D13Q9NVG8 400 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 GOLGA6AQ9NYA3 693 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 HTTP42858 3142 aa15.14■□□□□ 0.01
SHCBP1-201ENST00000303383 DCDC2CA8MYV0 355 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 SYF2O95926 243 aaKnown RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 ACTN2P35609 894 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 CDK7P50613 346 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 ITGA8P53708 1063 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 EIF3EP60228 445 aaKnown RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 GABPB1Q06547 395 aaPredicted RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 ZC3H12AQ5D1E8 599 aaKnown RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 IZUMO3Q5VZ72 239 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 TEKT4Q8WW24 435 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 LINC01599Q8WXQ3 324 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.012e-6■□□□□ 8.4
SHCBP1-201ENST00000303383 ART4Q93070 314 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 TMEM121Q9BTD3 319 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 DDX23Q9BUQ8 820 aaKnown RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 DRG1Q9Y295 367 aaKnown RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 C3orf70A6NLC5 250 aaPredicted RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 APOC4-APOC2K7ER74 178 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 M0QZQ0 153 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 AGPSO00116 658 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 APOC2P02655 101 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 CYP11A1P05108 521 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 ITGB1P05556 798 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 RABGGTBP53611 331 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 GYS2P54840 703 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 HDAC4P56524 1084 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 IFRD2Q12894 506 aaPredicted RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 NME3Q13232 169 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 DRICH1Q6PGQ1 229 aaPredicted RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 ZDHHC24Q6UX98 284 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 PPP1R12CQ9BZL4 782 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 POPDC2Q9HBU9 364 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 H7C0C1 242 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 DAB1O75553 588 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 DDHD2O94830 711 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 NOS2P35228 1153 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 ATP5OP48047 213 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 RPL34P49207 117 aaKnown RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 CCL23P55773 120 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 P3H1Q32P28 736 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 C1orf228Q6PIY5 440 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 C4orf50Q6ZRC1 276 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 ARCQ7LC44 396 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 CEP57Q86XR8 500 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 IQCKQ8N0W5 287 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 SMOQ99835 787 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 PAK6Q9NQU5 681 aaPredicted RBP15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 AP4E1Q9UPM8 1137 aa15.13■□□□□ 0.01
SHCBP1-201ENST00000303383 M0QYT0 321 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 APOL1O14791 398 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 NBNO60934 754 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 USP17L7P0C7H9 530 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 MYZAPP0CAP1 466 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 TYMPP19971 482 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 BCAR1P56945 870 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 GPS1Q13098 491 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 DPYSL3Q14195 570 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 DARS2Q6PI48 645 aaKnown RBP15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 STRADAQ7RTN6 431 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 FAM131BQ86XD5 332 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 HIPK3Q9H422 1215 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 FAM204AQ9H8W3 233 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 DMAP1Q9NPF5 467 aaPredicted RBP15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 CNGB3Q9NQW8 809 aa15.12■□□□□ 0.01
SHCBP1-201ENST00000303383 PCDHB8Q9UN66 801 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms