RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 MSH4O15457 936 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 CFBP00751 764 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 MTM1Q13496 603 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 DGKZQ13574 1117 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 SF3B4Q15427 424 aaKnown RBP eCLIP16.33■□□□□ 0.219e-8■■□□□ 12.6
CTDSP1-201ENST00000273062 HYIQ5T013 277 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 CES4AQ5XG92 561 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 FAM91A1Q658Y4 838 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 XKR5Q6UX68 686 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 FRMD5Q7Z6J6 570 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 HPS6Q86YV9 775 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 FAM151AQ8WW52 585 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 PLEKHA8Q96JA3 519 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 CFAP57Q96MR6 1250 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 PACSIN3Q9UKS6 424 aa16.33■□□□□ 0.21
CTDSP1-201ENST00000273062 FAM47E-STBD1D6RA91 191 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 J3QRK9 145 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 CLIC2O15247 247 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 PEX1O43933 1283 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 SPATA31C1P0DKV0 1188 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 SREBF1P36956 1147 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 RTKN2Q8IZC4 609 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 GSDMBQ8TAX9 411 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 FBXL8Q96CD0 374 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 CEP295NLQ96MC4 621 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 CCDC106Q9BWC9 280 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 HEMGNQ9BXL5 484 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 DCLK3Q9C098 648 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 XPNPEP1Q9NQW7 623 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.33■□□□□ 0.26e-6■□□□□ 9.7
CTDSP1-201ENST00000273062 SENP1Q9P0U3 644 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 PCDHB13Q9Y5F0 798 aa16.33■□□□□ 0.2
CTDSP1-201ENST00000273062 FSCN2O14926 492 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 TBC1D12O60347 775 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 EGFRP00533 1210 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 PHBP35232 272 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 KCNA1Q09470 495 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 USP41Q3LFD5 358 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 ITPKCQ96DU7 683 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 FAM111AQ96PZ2 611 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 GLT8D2Q9H1C3 349 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 WNT8AQ9H1J5 351 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 MYH11P35749 1972 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 KDM3AQ9Y4C1 1321 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 FAM58BPP0C7Q3 252 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 PPARGP37231 505 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 SLC12A3P55017 1021 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 KCNJ8Q15842 424 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 DDHD1Q8NEL9 900 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 MAELQ96JY0 434 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 MECRQ9BV79 373 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 VPS11Q9H270 941 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 THEGQ9P2T0 379 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 COL2A1P02458 1487 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 KIF13BQ9NQT8 1826 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 EML1O00423 815 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 ZSCAN5DPP0CG00 497 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 TRPC1P48995 793 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 PEX3P56589 373 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 RPL26P61254 145 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 RELL1Q8IUW5 271 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 ALLCQ8N6M5 410 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 TTC13Q8NBP0 860 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 ATP2A3Q93084 1043 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 EBF4Q9BQW3 602 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 NCKIPSDQ9NZQ3 722 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 PSMC3IPQ9P2W1 217 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 SOX13Q9UN79 622 aa16.32■□□□□ 0.2
CTDSP1-201ENST00000273062 PSME4Q14997 1843 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 SF3B1O75533 1304 aaKnown RBP eCLIP16.31■□□□□ 0.23e-6■■■■■ 90.4
CTDSP1-201ENST00000273062 SOBPA7XYQ1 873 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 CNOT3O75175 753 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 TGDSO95455 350 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 ENDOUP21128 410 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 RPL10P27635 214 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 NDST2P52849 883 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 HADHBP55084 474 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 CAV1Q03135 178 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 CXCL9Q07325 125 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 PHKG1Q16816 387 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 EGFLAMQ63HQ2 1017 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 ANKMY2Q8IV38 441 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 ARID3BQ8IVW6 561 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 SLFN12Q8IYM2 578 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 BANPQ8N9N5 519 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 ANKK1Q8NFD2 765 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 DDI1Q8WTU0 396 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 WDR18Q9BV38 432 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 VAV3Q9UKW4 847 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 GNEQ9Y223 722 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 POMPQ9Y244 141 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 FOXN3O00409 490 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 AQP9O43315 295 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 CHMP2AO43633 222 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 CCNT2O60583 730 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms