RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 EPHX4Q8IUS5 362 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 FAR1Q8WVX9 515 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 CYP26A1O43174 497 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 GRAP2O75791 330 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 EPHX2P34913 555 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 RHOAP61586 193 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 PI16Q6UXB8 463 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.32
USP13-201ENST00000263966 STARD8Q92502 1023 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 ELOVL6Q9H5J4 265 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 ITGB6P18564 788 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 PRCPP42785 496 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 CCDC81Q6ZN84 652 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 KCTD17Q8N5Z5 321 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 CLEC4MQ9H2X3 399 aaPredicted RBP17.02■□□□□ 0.32
USP13-201ENST00000263966 ZNF618Q5T7W0 954 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 CGRRF1Q99675 332 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 TMEM8AQ9HCN3 771 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 TRIM10Q9UDY6 481 aa17.02■□□□□ 0.32
USP13-201ENST00000263966 CDC42BPAQ5VT25 1732 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.02■□□□□ 0.31
USP13-201ENST00000263966 FBXO21O94952 628 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 GUF1Q8N442 669 aaKnown RBP17.02■□□□□ 0.31
USP13-201ENST00000263966 C3orf20Q8ND61 904 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 SOCS4Q8WXH5 440 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 CPA5Q8WXQ8 436 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 C17orf75Q9HAS0 396 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 CHRNA5P30532 468 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 HSPA13P48723 471 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 RPTNQ6XPR3 784 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 STRBPQ96SI9 672 aaKnown RBP17.02■□□□□ 0.31
USP13-201ENST00000263966 MLXIPLQ9NP71 852 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 GGT7Q9UJ14 662 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 PTPRTO14522 1441 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 PRDX5P30044 214 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 TSNQ15631 228 aaKnown RBP17.02■□□□□ 0.31
USP13-201ENST00000263966 NFIL3Q16649 462 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 TXNRD1Q16881 649 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 SLC30A9Q6PML9 568 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 RIBC1Q8N443 379 aaPredicted RBP17.02■□□□□ 0.31
USP13-201ENST00000263966 RDM1Q8NG50 284 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 KCTD10Q9H3F6 313 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 RERGLQ9H628 205 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 ETNK1Q9HBU6 452 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 NPHS2Q9NP85 383 aa17.02■□□□□ 0.31
USP13-201ENST00000263966 MARK2Q7KZI7 788 aaKnown RBP17.01■□□□□ 0.31
USP13-201ENST00000263966 IZUMO1Q8IYV9 350 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 KCNB2Q92953 911 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 OSBP2Q969R2 916 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 ZNF512BQ96KM6 892 aaPredicted RBP17.01■□□□□ 0.31
USP13-201ENST00000263966 PDCD10Q9BUL8 212 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 MARK1Q9P0L2 795 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 MYL12AP19105 171 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 CBFBQ13951 182 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 CCDC149Q6ZUS6 474 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 HDHD2Q9H0R4 259 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 RAD21L1Q9H4I0 556 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 DNAJC11Q9NVH1 559 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 ING3Q9NXR8 418 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 RRM1P23921 792 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 ZMYND11Q15326 602 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 C3orf62Q6ZUJ4 267 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 GATAD2AQ86YP4 633 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 MANSC4A6NHS7 340 aaPredicted RBP17.01■□□□□ 0.31
USP13-201ENST00000263966 IL6P05231 212 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 VAV1P15498 845 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 DAB2IPQ5VWQ8 1189 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 RASGEF1AQ8N9B8 481 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 RANBP17Q9H2T7 1088 aaKnown RBP17.01■□□□□ 0.31
USP13-201ENST00000263966 TTC37Q6PGP7 1564 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 RNPC3Q96LT9 517 aaKnown RBP17.01■□□□□ 0.31
USP13-201ENST00000263966 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
USP13-201ENST00000263966 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP13-201ENST00000263966 STARD13Q9Y3M8 1113 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 PDE4DIPQ5VU43 2346 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 URADA6NGE7 173 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 KRT74Q7RTS7 529 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 ADGRF2Q8IZF7 708 aa17.01■□□□□ 0.31
USP13-201ENST00000263966 AIM2O14862 343 aa17■□□□□ 0.31
USP13-201ENST00000263966 BCAT1P54687 386 aa17■□□□□ 0.31
USP13-201ENST00000263966 MAD2L1Q13257 205 aaPredicted RBP17■□□□□ 0.31
USP13-201ENST00000263966 PTK7Q13308 1070 aa17■□□□□ 0.31
USP13-201ENST00000263966 PDIA5Q14554 519 aa17■□□□□ 0.31
USP13-201ENST00000263966 SUSD6Q92537 303 aa17■□□□□ 0.31
USP13-201ENST00000263966 TINF2Q9BSI4 451 aa17■□□□□ 0.31
USP13-201ENST00000263966 POLR1BQ9H9Y6 1135 aa17■□□□□ 0.31
USP13-201ENST00000263966 GBA2Q9HCG7 927 aaPredicted RBP17■□□□□ 0.31
USP13-201ENST00000263966 DCP1AQ9NPI6 582 aaPredicted RBP17■□□□□ 0.31
USP13-201ENST00000263966 TUBE1Q9UJT0 475 aa17■□□□□ 0.31
USP13-201ENST00000263966 NEU2Q9Y3R4 380 aa17■□□□□ 0.31
USP13-201ENST00000263966 PIPSLA2A3N6 862 aa17■□□□□ 0.31
USP13-201ENST00000263966 WARSP23381 471 aaKnown RBP17■□□□□ 0.31
USP13-201ENST00000263966 ZNF211Q13398 564 aaPredicted RBP17■□□□□ 0.31
USP13-201ENST00000263966 STAG2Q8N3U4 1231 aa17■□□□□ 0.31
USP13-201ENST00000263966 TMEM199Q8N511 208 aa17■□□□□ 0.31
USP13-201ENST00000263966 FAM167BQ9BTA0 163 aa17■□□□□ 0.31
USP13-201ENST00000263966 RBM7Q9Y580 266 aaKnown RBP17■□□□□ 0.31
USP13-201ENST00000263966 CYB561D2O14569 222 aa17■□□□□ 0.31
USP13-201ENST00000263966 CNOT3O75175 753 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms