RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CA9Q16790 459 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 FAM171BQ6P995 826 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 SIX6OS1Q8N1H7 587 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 GLIS1Q8NBF1 620 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 SPATA18Q8TC71 538 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 NKD2Q969F2 451 aaPredicted RBP16.51■□□□□ 0.23
VPS26A-201ENST00000263559 NCAPGQ9BPX3 1015 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 SNRNP25Q9BV90 132 aaKnown RBP16.51■□□□□ 0.23
VPS26A-201ENST00000263559 H0YGN5 161 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 ENPP3O14638 875 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 ATF2P15336 505 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 MATKP42679 507 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 ALLCQ8N6M5 410 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 CCDC89Q8N998 374 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 TTC13Q8NBP0 860 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 URGCPQ8TCY9 931 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 MYLPFQ96A32 169 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 TMEM209Q96SK2 561 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 TBCBQ99426 244 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 RNF208Q9H0X6 261 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 TBC1D13Q9NVG8 400 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 TMLHEQ9NVH6 421 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 CALCOCO1Q9P1Z2 691 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 NFS1Q9Y697 457 aa16.51■□□□□ 0.23
VPS26A-201ENST00000263559 IL4RP24394 825 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 ITGA8P53708 1063 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 YWHAZP63104 245 aaKnown RBP16.5■□□□□ 0.23
VPS26A-201ENST00000263559 KRT81Q14533 505 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 PLEKHG4Q58EX7 1191 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 INTS6LQ5JSJ4 861 aaKnown RBP16.5■□□□□ 0.23
VPS26A-201ENST00000263559 OVOS1Q6IE37 1185 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 GPRIN1Q7Z2K8 1008 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 COLGALT2Q8IYK4 626 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 GOLGA6L1Q8N7Z2 621 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 OR10T2Q8NGX3 314 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 OR2W6PQ8NHA6 318 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 ARL8AQ96BM9 186 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 TMEM121Q9BTD3 319 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 MAK16Q9BXY0 300 aaKnown RBP16.5■□□□□ 0.23
VPS26A-201ENST00000263559 FAM129AQ9BZQ8 928 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 TMEM161AQ9NX61 479 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 OGDHLQ9ULD0 1010 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 PQBP1O60828 265 aaKnown RBP16.5■□□□□ 0.23
VPS26A-201ENST00000263559 ITGAVP06756 1048 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 CCL5P13501 91 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 ETS1P14921 441 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 PMS2P54278 862 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 GABPB1Q06547 395 aaPredicted RBP16.5■□□□□ 0.23
VPS26A-201ENST00000263559 PDK2Q15119 407 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 ERMARDQ5T6L9 678 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 RHBDF2Q6PJF5 856 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 LRRTM3Q86VH5 581 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 MAP7D3Q8IWC1 876 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 SMARCD1Q96GM5 515 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 PKMYT1Q99640 499 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 ULBP1Q9BZM6 244 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 PCDH18Q9HCL0 1135 aa16.5■□□□□ 0.23
VPS26A-201ENST00000263559 HHLA1C9JL84 531 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 APOC4-APOC2K7ER74 178 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 NRP1O14786 923 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 MDM4O15151 490 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 DAB1O75553 588 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 APOC2P02655 101 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 ZSCAN5DPP0CG00 497 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 PECAM1P16284 738 aaPredicted RBP16.49■□□□□ 0.23
VPS26A-201ENST00000263559 RNASELQ05823 741 aaKnown RBP16.49■□□□□ 0.23
VPS26A-201ENST00000263559 DCAF6Q58WW2 860 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 RAB41Q5JT25 222 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 HFE2Q6ZVN8 426 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 RNF157Q96PX1 679 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 BEGAINQ9BUH8 593 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 MAGEB5Q9BZ81 275 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 C10orf88Q9H8K7 445 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 KANSL3Q9P2N6 904 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 DNAJB4Q9UDY4 337 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 SCN5AQ14524 2016 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 OR1G1P47890 313 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 PITX1P78337 314 aaPredicted RBP16.49■□□□□ 0.23
VPS26A-201ENST00000263559 SLC25A52Q3SY17 297 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 LRIG3Q6UXM1 1119 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 THEM5Q8N1Q8 247 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 FRMD8P1Q9BZ68 369 aaPredicted RBP16.49■□□□□ 0.23
VPS26A-201ENST00000263559 CSNK1G1Q9HCP0 422 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 ANAPC5Q9UJX4 755 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 ADAM21Q9UKJ8 722 aa16.49■□□□□ 0.23
VPS26A-201ENST00000263559 GOLGA8KD6RF30 607 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 PITPNM1O00562 1244 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 TYMPP19971 482 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 BDNFP23560 247 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 NOS2P35228 1153 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 SULT1E1P49888 294 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 ATN1P54259 1190 aaPredicted RBP16.48■□□□□ 0.23
VPS26A-201ENST00000263559 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 TTMPQ5BVD1 217 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 SPDYCQ5MJ68 293 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 SYPL2Q5VXT5 272 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 NPNTQ6UXI9 565 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 STRADAQ7RTN6 431 aa16.48■□□□□ 0.23
VPS26A-201ENST00000263559 EPB41L4BQ9H329 900 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms