RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 SCN4BQ8IWT1 228 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 TEKT4Q8WW24 435 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 RIN2Q8WYP3 895 aaPredicted RBP13.6□□□□□ -0.23
VAMP7-201ENST00000262640 RAPGEF5Q92565 580 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 HERC2P3Q9BVR0 1158 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 AAASQ9NRG9 546 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.6□□□□□ -0.23
VAMP7-201ENST00000262640 NR2E1Q9Y466 385 aa13.6□□□□□ -0.23
VAMP7-201ENST00000262640 YJEFN3A6XGL0 299 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 E7ENQ6 273 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PI4K2BG5E9Z4 385 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 TNFRSF10BO14763 440 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PHF2O75151 1096 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 LTFP02788 710 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 SULT1E1P49888 294 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 SLC5A3P53794 718 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 HDAC4P56524 1084 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 HTRA4P83105 476 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 SIX1Q15475 284 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PSMD5Q16401 504 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 CYP1B1Q16678 543 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 SMTNL2Q2TAL5 461 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 DCAF6Q58WW2 860 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 TMEM240Q5SV17 173 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 KIAA1841Q6NSI8 718 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PRSS55Q6UWB4 352 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 MFSD7Q6UXD7 560 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 RSPO2Q6UXX9 243 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PRELID2Q8N945 189 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 CMASQ8NFW8 434 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 CCDC26Q8TAB7 109 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 NT5C3BQ969T7 300 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PEBP4Q96S96 227 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 ARGLU1Q9NWB6 273 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 RRN3Q9NYV6 651 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 RAB21Q9UL25 225 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PTPRDP23468 1912 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 TCRBV7S2A1N4TA0A589 114 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 MTMR11A4FU01 709 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 CAPN9O14815 690 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 GJB5O95377 273 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 RARAP10276 462 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 CHRNA3P32297 505 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PPM1AP35813 382 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 KLF1Q13351 362 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 TFDP3Q5H9I0 405 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 KCNT1Q5JUK3 1230 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 SLC8B1Q6J4K2 584 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 WDR93Q6P2C0 686 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 HFE2Q6ZVN8 426 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 CYP4V2Q6ZWL3 525 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 BHLHA9Q7RTU4 235 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 C12orf50Q8NA57 414 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 KCTD6Q8NC69 237 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 FBXO22Q8NEZ5 403 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 ACSF2Q96CM8 615 aaPredicted RBP13.59□□□□□ -0.23
VAMP7-201ENST00000262640 RUNDC3BQ96NL0 473 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PNKPQ96T60 521 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 NPY6RQ99463 290 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 HTATIP2Q9BUP3 242 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 EFR3BQ9Y2G0 817 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 ALPK3Q96L96 1907 aa13.59□□□□□ -0.23
VAMP7-201ENST00000262640 hCG_1818297A0A087WSY0 165 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 C3orf70A6NLC5 250 aaPredicted RBP13.58□□□□□ -0.23
VAMP7-201ENST00000262640 ENDOD1O94919 500 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 H2AFXP16104 143 aaPredicted RBP13.58□□□□□ -0.23
VAMP7-201ENST00000262640 TFE3P19532 575 aaPredicted RBP13.58□□□□□ -0.23
VAMP7-201ENST00000262640 KDELR1P24390 212 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 CDKN2BP42772 138 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 RAB6CQ53S08 254 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 BEND5Q7L4P6 421 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 MAATS1Q7Z4T9 603 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.23
VAMP7-201ENST00000262640 ZDHHC14Q8IZN3 488 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 ATAD1Q8NBU5 361 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 HSPH1Q92598 858 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 HEMGNQ9BXL5 484 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 RAB6CQ9H0N0 254 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 HOMER3Q9NSC5 361 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 STIM2Q9P246 746 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 STK39Q9UEW8 545 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 CDY1Q9Y6F8 540 aa13.58□□□□□ -0.23
VAMP7-201ENST00000262640 RAD51CO43502 376 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 TJP3O95049 919 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 FYNP06241 537 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 GLUD2P49448 558 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 EPHB4P54760 987 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 DSG1Q02413 1049 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 BRD3Q15059 726 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 TAZQ16635 292 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 RNF19BQ6ZMZ0 732 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 BNIPLQ7Z465 357 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 NUP93Q8N1F7 819 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 SCAMP5Q8TAC9 235 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 HERVK_113Q902F9 699 aa13.58□□□□□ -0.24
VAMP7-201ENST00000262640 MAGOHBQ96A72 148 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms