RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 PCDHB12Q9Y5F1 795 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 KRIT1O00522 736 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 C2CD2LO14523 706 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 TRIM66O15016 1216 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 KRT7P08729 469 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 RPL17P18621 184 aaKnown RBP17.31■□□□□ 0.36
COTL1-201ENST00000262428 OR1D2P34982 312 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 PPM1AP35813 382 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 GPR15P49685 360 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 SLC5A3P53794 718 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 ELF2Q15723 593 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 DDR2Q16832 855 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 CYP4V2Q6ZWL3 525 aaPredicted RBP17.31■□□□□ 0.36
COTL1-201ENST00000262428 SLC13A5Q86YT5 568 aaPredicted RBP17.31■□□□□ 0.36
COTL1-201ENST00000262428 SP7Q8TDD2 431 aaPredicted RBP17.31■□□□□ 0.36
COTL1-201ENST00000262428 C2orf15Q8WU43 125 aaKnown RBP17.31■□□□□ 0.36
COTL1-201ENST00000262428 DPF3Q92784 378 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 CLP1Q92989 425 aaKnown RBP17.31■□□□□ 0.36
COTL1-201ENST00000262428 NT5C3BQ969T7 300 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 PEBP4Q96S96 227 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 NCAPGQ9BPX3 1015 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 CLSTN3Q9BQT9 956 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 ZWILCHQ9H900 591 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 NGRNQ9NPE2 291 aaKnown RBP17.31■□□□□ 0.36
COTL1-201ENST00000262428 SLC27A5Q9Y2P5 690 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 NR2E1Q9Y466 385 aa17.31■□□□□ 0.36
COTL1-201ENST00000262428 WDR27A2RRH5 827 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 FSCN2O14926 492 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 LTFP02788 710 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 HAPLN1P10915 354 aaPredicted RBP17.3■□□□□ 0.36
COTL1-201ENST00000262428 DESP17661 470 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 HDAC4P56524 1084 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 ROR1Q01973 937 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 SLC25A52Q3SY17 297 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 DCAF6Q58WW2 860 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 SDHAF4Q5VUM1 108 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 SYPL2Q5VXT5 272 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 RAPGEF5Q92565 580 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 RNF25Q96BH1 459 aaPredicted RBP17.3■□□□□ 0.36
COTL1-201ENST00000262428 ACSF2Q96CM8 615 aaPredicted RBP17.3■□□□□ 0.36
COTL1-201ENST00000262428 TBCBQ99426 244 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 NPY6RQ99463 290 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 EPC1Q9H2F5 836 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 KLHL11Q9NVR0 708 aa17.3■□□□□ 0.36
COTL1-201ENST00000262428 COL4A4P53420 1690 aaPredicted RBP17.29■□□□□ 0.36
COTL1-201ENST00000262428 GREB1Q4ZG55 1949 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 TCRBV7S2A1N4TA0A589 114 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 PI4K2BG5E9Z4 385 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 FGF18O76093 207 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 ENDOD1O94919 500 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 KRT1P04264 644 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 RARAP10276 462 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 ATP2A2P16615 1042 aaKnown RBP17.29■□□□□ 0.36
COTL1-201ENST00000262428 DUSP4Q13115 394 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 SMTNL2Q2TAL5 461 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 KCNT1Q5JUK3 1230 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 RASIP1Q5U651 963 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 STRADAQ7RTN6 431 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 BNIPLQ7Z465 357 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 ANKS1BQ7Z6G8 1248 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 ADAT2Q7Z6V5 191 aaKnown RBP17.29■□□□□ 0.36
COTL1-201ENST00000262428 ZDHHC14Q8IZN3 488 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 VPS52Q8N1B4 723 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 NUP93Q8N1F7 819 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 CMASQ8NFW8 434 aaPredicted RBP17.29■□□□□ 0.36
COTL1-201ENST00000262428 RBM41Q96IZ5 413 aaKnown RBP17.29■□□□□ 0.36
COTL1-201ENST00000262428 SLITRK1Q96PX8 696 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 HERPUD2Q9BSE4 406 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 NAALADL1Q9UQQ1 740 aa17.29■□□□□ 0.36
COTL1-201ENST00000262428 CCDC188H7C350 402 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 SULT1E1P49888 294 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 PITX1P78337 314 aaPredicted RBP17.28■□□□□ 0.36
COTL1-201ENST00000262428 LLGL1Q15334 1064 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 ZFYVE27Q5T4F4 411 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 OTUD1Q5VV17 481 aaPredicted RBP17.28■□□□□ 0.36
COTL1-201ENST00000262428 SCYL2Q6P3W7 929 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 MFSD7Q6UXD7 560 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 CCDC50Q8IVM0 306 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 IL37Q9NZH6 218 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 ZNF638Q14966 1978 aaKnown RBP17.28■□□□□ 0.36
COTL1-201ENST00000262428 MYO16Q9Y6X6 1858 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 LCHNA4D1U4 455 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 C3orf70A6NLC5 250 aaPredicted RBP17.28■□□□□ 0.36
COTL1-201ENST00000262428 DYNC1I1O14576 645 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 TLL1O43897 1013 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 PRPSAP2O60256 369 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 SOAT2O75908 522 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 URODP06132 367 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 RALAP11233 206 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 ATXN1P54253 815 aaKnown RBP17.28■□□□□ 0.36
COTL1-201ENST00000262428 COPS2P61201 443 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 KRT17Q04695 432 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 SMC1AQ14683 1233 aaKnown RBP17.28■□□□□ 0.36
COTL1-201ENST00000262428 SIX1Q15475 284 aaPredicted RBP17.28■□□□□ 0.36
COTL1-201ENST00000262428 MGAT5BQ3V5L5 792 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 BOLA3Q53S33 107 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 BSPRYQ5W0U4 402 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 SPOCD1Q6ZMY3 1216 aa17.28■□□□□ 0.36
COTL1-201ENST00000262428 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms