RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ACSF2Q96CM8 615 aaPredicted RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 MS4A14Q96JA4 679 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 BTBD6Q96KE9 485 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 RHOBTB1O94844 696 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 SERPIND1P05546 499 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 MAP2K2P36507 400 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 SARSP49591 514 aaKnown RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 NDUFV1P49821 464 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 MAGOHP61326 146 aaKnown RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 SLC6A3Q01959 620 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 EVX2Q03828 476 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 WASHC5Q12768 1159 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 ACAP1Q15027 740 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 GBP7Q8N8V2 638 aaPredicted RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 RASSF4Q9H2L5 321 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 MRPL40Q9NQ50 206 aaKnown RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDH1-201ENST00000261769 CHMP2BQ9UQN3 213 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 DERAQ9Y315 318 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 USP27XA6NNY8 438 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 JCHAINP01591 159 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 OR1E1P30953 314 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 COILP38432 576 aaPredicted RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 IFT88Q13099 833 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 SHROOM1Q2M3G4 852 aaPredicted RBP14.42□□□□□ -0.1
CDH1-201ENST00000261769 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDH1-201ENST00000261769 MCOLN2Q8IZK6 566 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 PPP1R13LQ8WUF5 828 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 GPATCH2LQ9NWQ4 482 aa14.42□□□□□ -0.1
CDH1-201ENST00000261769 ALDH1A2O94788 518 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 CXCL14O95715 111 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 CYP2C18P33260 490 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 MDM2Q00987 491 aaPredicted RBP14.41□□□□□ -0.1
CDH1-201ENST00000261769 E2F4Q16254 413 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 KLHL29Q96CT2 875 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 TRIM51Q9BSJ1 452 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 RBPJLQ9UBG7 517 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 SMG5Q9UPR3 1016 aaKnown RBP14.41□□□□□ -0.1
CDH1-201ENST00000261769 DRG1Q9Y295 367 aaKnown RBP14.41□□□□□ -0.1
CDH1-201ENST00000261769 CHKAP35790 457 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ST3GAL1Q11201 340 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 CNGA2Q16280 664 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 DEFB106AQ8N104 65 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 SLC20A1Q8WUM9 679 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 CCDC124Q96CT7 223 aaKnown RBP14.41□□□□□ -0.1
CDH1-201ENST00000261769 C9orf72Q96LT7 481 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ERP44Q9BS26 406 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 LRRC1Q9BTT6 524 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
CDH1-201ENST00000261769 ENDOD1O94919 500 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 HDCP19113 662 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 TUBP50607 506 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 HOMEZQ8IX15 550 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ULBP1Q9BZM6 244 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.41□□□□□ -0.1
CDH1-201ENST00000261769 PTCH2Q9Y6C5 1203 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 PCDH8O95206 1070 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 GLUD1P00367 558 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 NFICP08651 508 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 SGCGQ13326 291 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 MUM1Q2TAK8 710 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ANKRD20A4Q4UJ75 823 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ANKRD20A8PQ5CZ79 823 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ANKRD20A2Q5SQ80 823 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 ANKRD20A1Q5TYW2 823 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDH1-201ENST00000261769 SUSD6Q92537 303 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 LPPQ93052 612 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 NCLNQ969V3 563 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 CD274Q9NZQ7 290 aa14.41□□□□□ -0.1
CDH1-201ENST00000261769 PSMC3IPQ9P2W1 217 aaPredicted RBP14.41□□□□□ -0.1
CDH1-201ENST00000261769 PLEKP08567 350 aaPredicted RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 NPR3P17342 541 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 ARF4P18085 180 aaPredicted RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 ATXN3P54252 364 aaPredicted RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 LGI2Q8N0V4 545 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 RBM22Q9NW64 420 aaKnown RBP eCLIP14.4□□□□□ -0.1
CDH1-201ENST00000261769 TRMT6Q9UJA5 497 aaKnown RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 DIAPH2O60879 1101 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 SNRPAP09012 282 aaKnown RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 KCNJ1P48048 391 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 ZNF571Q7Z3V5 609 aaPredicted RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 FAM118BQ9BPY3 351 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 CORO1BQ9BR76 489 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 TTPALQ9BTX7 342 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 TRABDQ9H4I3 376 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 TRIM10Q9UDY6 481 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 PADI3Q9ULW8 664 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 ZNF185O15231 689 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 IGSF6O95976 241 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 MAGEA4P43358 317 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 SCNN1BP51168 640 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 CAPRIN1Q14444 709 aaKnown RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 MAPRE2Q15555 327 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 HIST2H2ACQ16777 129 aaPredicted RBP14.4□□□□□ -0.1
CDH1-201ENST00000261769 HIST2H2AA3Q6FI13 130 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 C3orf62Q6ZUJ4 267 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 FAM47EQ6ZV65 393 aa14.4□□□□□ -0.1
CDH1-201ENST00000261769 LENG9Q96B70 501 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms