RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TXLNGYQ9BZA5 131 aa15.27■□□□□ 0.04
TRAFD1-201ENST00000257604 C2CD2Q9Y426 696 aa15.27■□□□□ 0.04
TRAFD1-201ENST00000257604 CDY2AQ9Y6F7 541 aa15.27■□□□□ 0.04
TRAFD1-201ENST00000257604 KCNN4O15554 427 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 PAPSS1O43252 624 aaPredicted RBP15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 TTC4O95801 387 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 RGS2P41220 211 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 VCPP55072 806 aaKnown RBP15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 MAP3K7CLP57077 242 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 PITX1P78337 314 aaPredicted RBP15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 SLC25A11Q02978 314 aaKnown RBP15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 EFTUD2Q15029 972 aaKnown RBP eCLIP15.27■□□□□ 0.032e-6■■□□□ 14.2
TRAFD1-201ENST00000257604 RGMBQ6NW40 437 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 STKLD1Q8NE28 680 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 CXorf38Q8TB03 319 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 C12orf65Q9H3J6 166 aaKnown RBP15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 ALG13Q9NP73 1137 aaKnown RBP15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 WHRNQ9P202 907 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 CHMP2BQ9UQN3 213 aa15.27■□□□□ 0.03
TRAFD1-201ENST00000257604 ENO4A6NNW6 628 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 ATICP31939 592 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 DRG2P55039 364 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 C6orf118Q5T5N4 469 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 MAF1Q9H063 256 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 ST3GAL5Q9UNP4 418 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 MFHAS1Q9Y4C4 1052 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 CYB561D2O14569 222 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 TRUB2O95900 331 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 BRAFP15056 766 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 SCNN1GP51170 649 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 ADIGQ0VDE8 80 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 FAM187BQ17R55 369 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 DCAF4L1Q3SXM0 396 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 MDH1BQ5I0G3 518 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 PPP1R15BQ5SWA1 713 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 DSTYKQ6XUX3 929 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 ADGRF2Q8IZF7 708 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 TRIM56Q9BRZ2 755 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 MGAMO43451 1857 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 TMEM120BA0PK00 339 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 BEST1O76090 585 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 PFKMP08237 780 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 MAN1A1P33908 653 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 BCAR1P56945 870 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 CCDC14Q49A88 953 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 PIGWQ7Z7B1 504 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 SAPCD2Q86UD0 394 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 RUNDC3BQ96NL0 473 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 ECT2Q9H8V3 914 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 CYP3A43Q9HB55 503 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 ZFYVE28Q9HCC9 887 aa15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 UBQLN1Q9UMX0 589 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-201ENST00000257604 TCRBV5S1A1TA0A578 114 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 RASA4BC9J798 803 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 H0Y3Z8 333 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 CAPN9O14815 690 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 RASA4O43374 803 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 YWHAGP61981 247 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 ZNF268Q14587 947 aaPredicted RBP15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 EXOC3L1Q86VI1 746 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 CTAGE3PQ8IX95 158 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 PALM2Q8IXS6 379 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 NME8Q8N427 588 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 C12orf50Q8NA57 414 aaPredicted RBP15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 CCDC110Q8TBZ0 833 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 RNF217Q8TC41 542 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 PYROXD1Q8WU10 500 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 CFAP36Q96G28 342 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 KCNK16Q96T55 309 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 NFKBIZQ9BYH8 718 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 LHX5Q9H2C1 402 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 RAB6BQ9NRW1 208 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 HOMER3Q9NSC5 361 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 DDX56Q9NY93 547 aaKnown RBP15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 SLC12A4Q9UP95 1085 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 TTLL3Q9Y4R7 772 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 RBM47A0AV96 593 aaKnown RBP15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 APRTP07741 180 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 TLDC1Q6P9B6 456 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 CCNYQ8ND76 341 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 EDEM1Q92611 657 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 NUDT5Q9UKK9 219 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 NAALADL1Q9UQQ1 740 aa15.25■□□□□ 0.03
TRAFD1-201ENST00000257604 TKTP29401 623 aaKnown RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 CD52P31358 61 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 RPL22P35268 128 aaKnown RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 TAF6P49848 677 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 ENPEPQ07075 957 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 LCLAT1Q6UWP7 414 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 ALLCQ8N6M5 410 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 FAF2Q96CS3 445 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 RSRC1Q96IZ7 334 aaKnown RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 CNPY3Q9BT09 278 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 SNRNP25Q9BV90 132 aaKnown RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 LRRC4Q9HBW1 653 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 XPO7Q9UIA9 1087 aaKnown RBP15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 MAD1L1Q9Y6D9 718 aa15.24■□□□□ 0.03
TRAFD1-201ENST00000257604 F8W810 466 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms