RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GOLGA8DPQ0D2H9 430 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 LRRC32Q14392 662 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 EML3Q32P44 896 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 VWA3BQ502W6 1294 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 MIIPQ5JXC2 388 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 CDKAL1Q5VV42 579 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 TRIM68Q6AZZ1 485 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 CREBRFQ8IUR6 639 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 KCTD13Q8WZ19 329 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 EXOC4Q96A65 974 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 OTUB2Q96DC9 234 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 NACA2Q9H009 215 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 CHRDQ9H2X0 955 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 EBF3Q9H4W6 596 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 SMPD4Q9NXE4 827 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 MTF2Q9Y483 593 aaPredicted RBP13.45□□□□□ -0.26
VPREB3-201ENST00000248948 WNT6Q9Y6F9 365 aa13.45□□□□□ -0.26
VPREB3-201ENST00000248948 E2F8A0AVK6 867 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 M0QYV0 167 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 PON1P27169 355 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 SOX9P48436 509 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 MYL5Q02045 173 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 CNGA2Q16280 664 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 DGKKQ5KSL6 1271 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 C11orf57Q6ZUT1 292 aaPredicted RBP13.44□□□□□ -0.26
VPREB3-201ENST00000248948 SCML4Q8N228 414 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 TFAP2BQ92481 460 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 SHC3Q92529 594 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 FAM122AQ96E09 287 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 ECT2Q9H8V3 914 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 LRRC4Q9HBW1 653 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 UBE2TQ9NPD8 197 aaPredicted RBP13.44□□□□□ -0.26
VPREB3-201ENST00000248948 SAMSN1Q9NSI8 373 aaKnown RBP13.44□□□□□ -0.26
VPREB3-201ENST00000248948 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPREB3-201ENST00000248948 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 CFAP97Q9P2B7 532 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 TBC1D14Q9P2M4 693 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 CHORDC1Q9UHD1 332 aaPredicted RBP13.44□□□□□ -0.26
VPREB3-201ENST00000248948 NDRG2Q9UN36 371 aaKnown RBP13.44□□□□□ -0.26
VPREB3-201ENST00000248948 CACNA1IQ9P0X4 2223 aa13.44□□□□□ -0.26
VPREB3-201ENST00000248948 PIEZO1Q92508 2521 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 A0A1W2PQH9 124 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 RNF225M0QZC1 329 aaPredicted RBP13.43□□□□□ -0.26
VPREB3-201ENST00000248948 MED7O43513 233 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 CHRNB1P11230 501 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 RALAP11233 206 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 RARGP13631 454 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 KRT5P13647 590 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 ARSAP15289 507 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 SLC9A1P19634 815 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 PTMSP20962 102 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
VPREB3-201ENST00000248948 ATP5C1P36542 298 aaKnown RBP13.43□□□□□ -0.26
VPREB3-201ENST00000248948 TKTL1P51854 596 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 ADIGQ0VDE8 80 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 FZD5Q13467 585 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 CCINQ13939 588 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 ANGPT1Q15389 498 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 PM20D1Q6GTS8 502 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 TXNDC11Q6PKC3 985 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 SIX6OS1Q8N1H7 587 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 SYNPOQ8N3V7 929 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 CHFRQ96EP1 664 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 NMUR1Q9HB89 426 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 CNGB3Q9NQW8 809 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 PRMT8Q9NR22 394 aaPredicted RBP13.43□□□□□ -0.26
VPREB3-201ENST00000248948 OSER1Q9NX31 292 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 NAGPAQ9UK23 515 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 SH3BP1Q9Y3L3 701 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 MYOFQ9NZM1 2061 aa13.43□□□□□ -0.26
VPREB3-201ENST00000248948 OTOL1A6NHN0 477 aaPredicted RBP13.42□□□□□ -0.26
VPREB3-201ENST00000248948 TRDMT1O14717 391 aaKnown RBP13.42□□□□□ -0.26
VPREB3-201ENST00000248948 ZBED1O96006 694 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 TPM2P07951 284 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 GNA15P30679 374 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 GJA4P35212 333 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 PGFP49763 221 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 TYRO3Q06418 890 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 NR1H3Q13133 447 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 HSP90AA4PQ58FG1 418 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 TMEM196Q5HYL7 178 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 MAMSTRQ6ZN01 415 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 BHLHA9Q7RTU4 235 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 SCD5Q86SK9 330 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 C1orf210Q8IVY1 113 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 TTC16Q8NEE8 873 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 TTC8Q8TAM2 541 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 SLC35F5Q8WV83 523 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 SECISBP2LQ93073 1101 aaKnown RBP13.42□□□□□ -0.26
VPREB3-201ENST00000248948 ZSWIM1Q9BR11 485 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 ULBP1Q9BZM6 244 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 NAT10Q9H0A0 1025 aaKnown RBP13.42□□□□□ -0.26
VPREB3-201ENST00000248948 SPATA6Q9NWH7 488 aaPredicted RBP13.42□□□□□ -0.26
VPREB3-201ENST00000248948 DNMT3LQ9UJW3 386 aa13.42□□□□□ -0.26
VPREB3-201ENST00000248948 FBXO4Q9UKT5 387 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms