RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 IGDCC3Q8IVU1 814 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 DCAKDQ8WVC6 231 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 HSPH1Q92598 858 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 PGBD4Q96DM1 585 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 SLIT2O94813 1529 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 SLITRK3O94933 977 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 GZMAP12544 262 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 NR4A1P22736 598 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 PCYT1AP49585 367 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 HADHBP55084 474 aaKnown RBP18.97■□□□□ 0.63
PTPN12-201ENST00000248594 PARP10Q53GL7 1025 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 PERM1Q5SV97 790 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 CES4AQ5XG92 561 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 FRMD7Q6ZUT3 714 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 CENPSQ8N2Z9 138 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 CCDC106Q9BWC9 280 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 ZDHHC7Q9NXF8 308 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 CDC14AQ9UNH5 594 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 S100BP04271 92 aaPredicted RBP18.97■□□□□ 0.63
PTPN12-201ENST00000248594 NAT1P18440 290 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 GMPRP36959 345 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 CSE1LP55060 971 aaKnown RBP18.97■□□□□ 0.63
PTPN12-201ENST00000248594 PDCD4Q53EL6 469 aaKnown RBP18.97■□□□□ 0.63
PTPN12-201ENST00000248594 METTL21CQ5VZV1 264 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 SIX5Q8N196 739 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 DDI1Q8WTU0 396 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 KLHL25Q9H0H3 589 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 RBM38Q9H0Z9 239 aaKnown RBP18.97■□□□□ 0.63
PTPN12-201ENST00000248594 XAB2Q9HCS7 855 aaKnown RBP18.97■□□□□ 0.63
PTPN12-201ENST00000248594 PNPOQ9NVS9 261 aa18.97■□□□□ 0.63
PTPN12-201ENST00000248594 CFHP08603 1231 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 BNIP3Q12983 259 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 TXNRD3NBQ6F5E7 133 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 ADGRD1Q6QNK2 874 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 FAM71DQ8N9W8 422 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 ALKBH8Q96BT7 664 aaKnown RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 SPATA17Q96L03 361 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 TMEM79Q9BSE2 394 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 C1orf232A0A0U1RR37 186 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 ARHGEF37A1IGU5 675 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 EIF2AK2P19525 551 aaKnown RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 ORC2Q13416 577 aaPredicted RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 DLGAP5Q15398 846 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 CYP2A13Q16696 494 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 ANO4Q32M45 955 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 DCUN1D2Q6PH85 259 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 STXBP4Q6ZWJ1 553 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 CBWD2Q8IUF1 395 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 RTKN2Q8IZC4 609 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 GFM2Q969S9 779 aaKnown RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 PPWD1Q96BP3 646 aaKnown RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 ESYT2A0FGR8 921 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 FAM86B1E9PN63 330 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 MATN2O00339 956 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 UFL1O94874 794 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 FAM86B2P0C5J1 330 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 P4HA1P13674 534 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 CD1EP15812 388 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 HOXD11P31277 338 aaPredicted RBP18.96■□□□□ 0.63
PTPN12-201ENST00000248594 CPOXP36551 454 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 GNA12Q03113 381 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 MORF4L2Q15014 288 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 MFSD14BQ5SR56 506 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 SLFN12Q8IYM2 578 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 LMO3Q8TAP4 145 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 TAS1R2Q8TE23 839 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 RSPH1Q8WYR4 309 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 DHRS1Q96LJ7 313 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 CDRT15Q96T59 188 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 TRPV6Q9H1D0 765 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 ACSS3Q9H6R3 686 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 RIOX1Q9H6W3 641 aa18.96■□□□□ 0.63
PTPN12-201ENST00000248594 PSMD12O00232 456 aaPredicted RBP18.95■□□□□ 0.62
PTPN12-201ENST00000248594 LMNB2Q03252 620 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 RNASEH2BQ5TBB1 312 aaKnown RBP18.95■□□□□ 0.62
PTPN12-201ENST00000248594 GPR107Q5VW38 600 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 ERI1Q8IV48 349 aaKnown RBP18.95■□□□□ 0.62
PTPN12-201ENST00000248594 ZNF786Q8N393 782 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 NEDD1Q8NHV4 660 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 NT5C1BQ96P26 610 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 MPHOSPH6Q99547 160 aaKnown RBP18.95■□□□□ 0.62
PTPN12-201ENST00000248594 DNAJB4Q9UDY4 337 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 AFG3L2Q9Y4W6 797 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 PLCH1Q4KWH8 1693 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 STX16-NPEPL1H3BU86 382 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 BCAP31P51572 246 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 EIF3EP60228 445 aaKnown RBP18.95■□□□□ 0.62
PTPN12-201ENST00000248594 RPL7AP62424 266 aaKnown RBP18.95■□□□□ 0.62
PTPN12-201ENST00000248594 ESRRGP62508 458 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 ZNF720Q7Z2F6 126 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 BTBD9Q96Q07 612 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 HAUS8Q9BT25 410 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 ZNF652Q9Y2D9 606 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 GPC6Q9Y625 555 aaPredicted RBP18.95■□□□□ 0.62
PTPN12-201ENST00000248594 BCORQ6W2J9 1755 aa18.95■□□□□ 0.62
PTPN12-201ENST00000248594 A0A1W2PPW3 197 aa18.94■□□□□ 0.62
PTPN12-201ENST00000248594 TCRBV9S1A1TA0A576 114 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms