RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TROVE2P10155 538 aaKnown RBP eCLIP22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 NEK3P51956 506 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 KRT81Q14533 505 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 PLD5Q8N7P1 536 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 USP6NLQ92738 828 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 FAF2Q96CS3 445 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 CLMNQ96JQ2 1002 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 PPP1R16BQ96T49 567 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 NT5C1AQ9BXI3 368 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 NPHS2Q9NP85 383 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 KCNH4Q9UQ05 1017 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 C15orf41Q9Y2V0 281 aa22.54■■□□□ 1.2
SH2D3A-201ENST00000245908 WDR91A4D1P6 747 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 ANP32DO95626 131 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 LGALS2P05162 132 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 TGM2P21980 687 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 SLC18A2Q05940 514 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 STILQ15468 1287 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 CDO1Q16878 200 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 KBTBD12Q3ZCT8 623 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 CCDC14Q49A88 953 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 C1orf228Q6PIY5 440 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 NSMCE1Q8WV22 266 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 APOPT1Q96IL0 206 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 FRMD8Q9BZ67 464 aaPredicted RBP22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 C12orf65Q9H3J6 166 aaKnown RBP22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 MROH8Q9H579 483 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 MANSC1Q9H8J5 431 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 AKT3Q9Y243 479 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 IKBKGQ9Y6K9 419 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 CITO14578 2027 aa22.53■■□□□ 1.2
SH2D3A-201ENST00000245908 CFAP69A5D8W1 941 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 SPDYE5A6NIY4 337 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 LPXNO60711 386 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 IL4RP24394 825 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 YWHAGP61981 247 aaKnown RBP eCLIP22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 BOLA3Q53S33 107 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 SH2D5Q6ZV89 423 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 CHSY1Q86X52 802 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 NT5DC4Q86YG4 428 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 SULF1Q8IWU6 871 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 ARMC2Q8NEN0 867 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 TEKT4Q8WW24 435 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 SLC7A6OSQ96CW6 309 aaPredicted RBP22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 SERAC1Q96JX3 654 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 ASB14A6NK59 587 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 GRAP2O75791 330 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 INHBAP08476 426 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 ETV4P43268 484 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 CCNHP51946 323 aaPredicted RBP22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 FAAP100Q0VG06 881 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 GOLGA7BQ2TAP0 167 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 PLEKHG4Q58EX7 1191 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 PQLC3Q8N755 202 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 DCPSQ96C86 337 aaKnown RBP22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 RAB6BQ9NRW1 208 aa22.52■■□□□ 1.2
SH2D3A-201ENST00000245908 TRAFD1O14545 582 aaPredicted RBP22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 VTNP04004 478 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 YWHAZP63104 245 aaKnown RBP22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 OLFML1Q6UWY5 402 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 ACAP3Q96P50 834 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 SGIP1Q9BQI5 828 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 PCDH18Q9HCL0 1135 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 KANSL3Q9P2N6 904 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 ZFP69BQ9UJL9 534 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 APOL1O14791 398 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 KCNN4O15554 427 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 C1QAP02745 245 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 RASSF2P50749 326 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 LAMC2Q13753 1193 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 PKDCCQ504Y2 493 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 TAF1BQ53T94 588 aaPredicted RBP22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 SLC9A4Q6AI14 798 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 EGFL6Q8IUX8 553 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 PTPRN2Q92932 1015 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 TBCBQ99426 244 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 SAR1AQ9NR31 198 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 TTLL3Q9Y4R7 772 aa22.51■■□□□ 1.19
SH2D3A-201ENST00000245908 COL1A2P08123 1366 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 BCLAF3A2AJT9 711 aaKnown RBP22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 AVILO75366 819 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 MAGEA6P43360 314 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 RGS7P49802 495 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 ANKRD13AQ8IZ07 590 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 KIRREL3Q8IZU9 778 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 C12orf29Q8N999 325 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 ADARB2Q9NS39 739 aaKnown RBP22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 GPATCH2LQ9NWQ4 482 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 TSPAN1O60635 241 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 OSBPP22059 807 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 BCAR1P56945 870 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 SYCP2LQ5T4T6 812 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 ARMCX2Q7L311 632 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 RFWD2Q8NHY2 731 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 PCDH19Q8TAB3 1148 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 FAM172AQ8WUF8 416 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 AFG1LQ8WV93 481 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 SLC4A5Q9BY07 1137 aa22.5■■□□□ 1.19
SH2D3A-201ENST00000245908 FAM155BO75949 473 aa22.49■■□□□ 1.19
SH2D3A-201ENST00000245908 CBX6O95503 412 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms