RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 MDFIQ99750 246 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 ZSWIM1Q9BR11 485 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 WNT8AQ9H1J5 351 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 DPEP3Q9H4B8 488 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 IP6K2Q9UHH9 426 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 STXBP5LQ9Y2K9 1186 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 PRG3Q9Y2Y8 225 aaPredicted RBP10.26□□□□□ -0.77
TTC1-201ENST00000231238 TIMM13Q9Y5L4 95 aaPredicted RBP10.26□□□□□ -0.77
TTC1-201ENST00000231238 TRIP11Q15643 1979 aa10.26□□□□□ -0.77
TTC1-201ENST00000231238 GOLGA6L10A0A0M3HER8 536 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 CCDC66A2RUB6 948 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 I3L4J1 428 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 PGRMC1O00264 195 aaKnown RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 CTIFO43310 598 aaKnown RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 TADA2AO75478 443 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 KRT3P12035 628 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 CCDC130P13994 396 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 PTPN1P18031 435 aaKnown RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 LMO2P25791 158 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 GJC1P36383 396 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 CETN2P41208 172 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 RGS7P49802 495 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 FAAP100Q0VG06 881 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 BST2Q10589 180 aaKnown RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 IKBKEQ14164 716 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 ZNF268Q14587 947 aaPredicted RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 ELF2Q15723 593 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 ERCC6LQ2NKX8 1250 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 PTPN20Q4JDL3 420 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 MDH1BQ5I0G3 518 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 FAM102AQ5T9C2 384 aaPredicted RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 ARHGAP17Q68EM7 881 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 PLEKHA7Q6IQ23 1121 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 LLGL2Q6P1M3 1020 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 RTN4RL1Q86UN2 441 aaPredicted RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 C3orf20Q8ND61 904 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 SLC2A14Q8TDB8 520 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 KBTBD7Q8WVZ9 684 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 LINC01599Q8WXQ3 324 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 SCARF2Q96GP6 870 aaPredicted RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 SYT15Q9BQS2 421 aa10.25□□□□□ -0.77
TTC1-201ENST00000231238 MRPL9Q9BYD2 267 aaKnown RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 ELAC1Q9H777 363 aaKnown RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 ARGLU1Q9NWB6 273 aaPredicted RBP10.25□□□□□ -0.77
TTC1-201ENST00000231238 PIK3R2O00459 728 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 CES2O00748 559 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 HCRTO43612 131 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 PROSCO94903 275 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 RAG1P15918 1043 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 PSMA2P25787 234 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 RFC2P35250 354 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 IRS1P35568 1242 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 GPD2P43304 727 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 BRCC3P46736 316 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 RWDD2BP57060 319 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 FAM189BP81408 668 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 TSPY1Q01534 308 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 C2orf54Q08AI8 447 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 LONRF2Q1L5Z9 754 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 TIGD5Q53EQ6 642 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 CLLU1OSQ5K130 101 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 SPOUT1Q5T280 376 aaKnown RBP10.24□□□□□ -0.77
TTC1-201ENST00000231238 OVOS1Q6IE37 1185 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 OSTM1Q86WC4 334 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 CRYBG2Q8N1P7 616 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 WDTC1Q8N5D0 677 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 ANKRD52Q8NB46 1076 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 LRRN4CLQ8ND94 238 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 HES6Q96HZ4 224 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 MS4A14Q96JA4 679 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 CPXM1Q96SM3 734 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 PAAF1Q9BRP4 392 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 COLEC11Q9BWP8 271 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 METTL5Q9NRN9 209 aaKnown RBP10.24□□□□□ -0.77
TTC1-201ENST00000231238 TBC1D13Q9NVG8 400 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 CDH9Q9ULB4 789 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 SCN1AP35498 2009 aa10.24□□□□□ -0.77
TTC1-201ENST00000231238 TBKBP1A7MCY6 615 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 E5RJQ4 531 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 RNF8O76064 485 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 GJB6O95452 261 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 ERBB2P04626 1255 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 RHOXF2BP0C7M4 288 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 FAM200BP0CF97 657 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CAPN2P17655 700 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 ACADSBP45954 432 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 IDH3AP50213 366 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 PDE4CQ08493 712 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 PTP4A2Q12974 167 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 PIGHQ14442 188 aaPredicted RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 SMC1AQ14683 1233 aaKnown RBP10.23□□□□□ -0.77
TTC1-201ENST00000231238 CNKSR3Q6P9H4 555 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CREG2Q8IUH2 290 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 NPAS4Q8IUM7 802 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 CCDC50Q8IVM0 306 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 SIX6OS1Q8N1H7 587 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 C3orf58Q8NDZ4 430 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 RSPH1Q8WYR4 309 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 LPIN3Q9BQK8 851 aa10.23□□□□□ -0.77
TTC1-201ENST00000231238 RHOXF2Q9BQY4 288 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms