RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 P4HA1P13674 534 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 PDGFRAP16234 1089 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 SLC26A2P50443 739 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 CCNHP51946 323 aaPredicted RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 ARFIP2P53365 341 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 C1orf228Q6PIY5 440 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 PRPF39Q86UA1 669 aaKnown RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 CNKSR2Q8WXI2 1034 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 PTCD3Q96EY7 689 aaKnown RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 NUDCD1Q96RS6 583 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 NFKBIZQ9BYH8 718 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 DENND2DQ9H6A0 471 aaPredicted RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 RAB6BQ9NRW1 208 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 E5RJQ4 531 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 PIK3R2O00459 728 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 HBP1O60381 514 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 DNAJC6O75061 913 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 PGK2P07205 417 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 MCF2P10911 925 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 BGNP21810 368 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 CDK16Q00536 496 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 INCA1Q0VD86 236 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 CDO1Q16878 200 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 OR6B2Q6IFH4 312 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 DPH6Q7L8W6 267 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 SLC26A11Q86WA9 606 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 CFAP36Q96G28 342 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 MPHOSPH6Q99547 160 aaKnown RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 TMEM120AQ9BXJ8 343 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 FRMD8Q9BZ67 464 aaPredicted RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 IFT122Q9HBG6 1241 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 BARX2Q9UMQ3 279 aaPredicted RBP16.94■□□□□ 0.3
LTBR-201ENST00000228918 KCNN4O15554 427 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 FAM155BO75949 473 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 DLDP09622 509 aaKnown RBP16.93■□□□□ 0.3
LTBR-201ENST00000228918 SERPINB4P48594 390 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 TNFAIP2Q03169 654 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 KRT81Q14533 505 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 AMHR2Q16671 573 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 FAM187BQ17R55 369 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 FAM182AQ5T1J6 154 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 TTC39BQ5VTQ0 682 aaPredicted RBP16.93■□□□□ 0.3
LTBR-201ENST00000228918 PLD5Q8N7P1 536 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 TTC8Q8TAM2 541 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 HPDLQ96IR7 371 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 SMARCAD1Q9H4L7 1026 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 ASB7Q9H672 318 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 POPDC2Q9HBU9 364 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 ARL8BQ9NVJ2 186 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 MTO1Q9Y2Z2 717 aaKnown RBP16.93■□□□□ 0.3
LTBR-201ENST00000228918 CFAP69A5D8W1 941 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 CCDC22O60826 627 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 CNMDO75829 334 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 C22orf31O95567 290 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 TGM2P21980 687 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 IL4RP24394 825 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 SERPINB3P29508 390 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 GCLCP48506 637 aaPredicted RBP16.93■□□□□ 0.3
LTBR-201ENST00000228918 NDST1P52848 882 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 PDK2Q15119 407 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 TAF11Q15544 211 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 LCLAT1Q6UWP7 414 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 FBXO16Q8IX29 292 aaPredicted RBP16.93■□□□□ 0.3
LTBR-201ENST00000228918 PQLC3Q8N755 202 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 COPS5Q92905 334 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 TUBB6Q9BUF5 446 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 CADM1Q9BY67 442 aaKnown RBP16.93■□□□□ 0.3
LTBR-201ENST00000228918 PDZD7Q9H5P4 517 aa16.93■□□□□ 0.3
LTBR-201ENST00000228918 GBA2Q9HCG7 927 aaPredicted RBP16.93■□□□□ 0.3
LTBR-201ENST00000228918 KAT6AQ92794 2004 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 TRIM49D1C9J1S8 452 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 COPEO14579 308 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 KLF11O14901 512 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 ENTPD5O75356 428 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 GRAP2O75791 330 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 PFKMP08237 780 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 MAGEA6P43360 314 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 PHKA2P46019 1235 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 SLC10A6Q3KNW5 377 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 CCDC62Q6P9F0 684 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 GADL1Q6ZQY3 521 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 DEFB132Q7Z7B7 95 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 MAP7D3Q8IWC1 876 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 PPM1NQ8N819 430 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 PRR11Q96HE9 360 aaPredicted RBP16.92■□□□□ 0.3
LTBR-201ENST00000228918 SRPK1Q96SB4 655 aaKnown RBP16.92■□□□□ 0.3
LTBR-201ENST00000228918 BTBD10Q9BSF8 475 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 MIS12Q9H081 205 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 PLAC1Q9HBJ0 212 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 FBXO6Q9NRD1 293 aaPredicted RBP16.92■□□□□ 0.3
LTBR-201ENST00000228918 GPATCH2LQ9NWQ4 482 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 ZNF180Q9UJW8 692 aa16.92■□□□□ 0.3
LTBR-201ENST00000228918 DPYSL4O14531 572 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 APOL1O14791 398 aa16.91■□□□□ 0.3
LTBR-201ENST00000228918 CSDE1O75534 798 aaKnown RBP16.91■□□□□ 0.3
LTBR-201ENST00000228918 ZBED1O96006 694 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms