RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 SAE1Q9UBE0 346 aaPredicted RBP18.4■□□□□ 0.54
GCDH-201ENST00000222214 NOD1Q9Y239 953 aa18.4■□□□□ 0.54
GCDH-201ENST00000222214 MEIS3P2A8K0S8 358 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 GUCY1A3Q02108 690 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 ITGA7Q13683 1181 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 DSC3Q14574 896 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 DPYSL2Q16555 572 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 ANKRD20A8PQ5CZ79 823 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 SLC9A4Q6AI14 798 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 DSTYKQ6XUX3 929 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 CENPUQ71F23 418 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 BCAS4Q8TDM0 211 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 EPS8L3Q8TE67 593 aaKnown RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 EPN3Q9H201 632 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 LRRC4Q9HBW1 653 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 SRRDQ9UH36 339 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 DDX20Q9UHI6 824 aaKnown RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 CDH9Q9ULB4 789 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 FARP1Q9Y4F1 1045 aaPredicted RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 THSD7BQ9C0I4 1608 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 DAB1O75553 588 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 FBXO21O94952 628 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 FAM200BP0CF97 657 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 ETS1P14921 441 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 PECAM1P16284 738 aaPredicted RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 PCSK1P29120 753 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 CD52P31358 61 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 CLCNKBP51801 687 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 HNRNPH2P55795 449 aaKnown RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 MMRN1Q13201 1228 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 AUHQ13825 339 aaKnown RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 PRUNE1Q86TP1 453 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 RIBC1Q8N443 379 aaPredicted RBP18.39■□□□□ 0.53
GCDH-201ENST00000222214 CENPTQ96BT3 561 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 UROC1Q96N76 676 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 MED10Q9BTT4 135 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 PPCSQ9HAB8 311 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 RNF186Q9NXI6 227 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 PTCH2Q9Y6C5 1203 aa18.39■□□□□ 0.53
GCDH-201ENST00000222214 ARHGEF37A1IGU5 675 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
GCDH-201ENST00000222214 GHRP10912 638 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 ELNP15502 786 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 MMP13P45452 471 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
GCDH-201ENST00000222214 SCNN1GP51170 649 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 BCAR1P56945 870 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 MRPS5P82675 430 aaKnown RBP18.38■□□□□ 0.53
GCDH-201ENST00000222214 GRIK3Q13003 919 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 UPP1Q16831 310 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 SLC25A52Q3SY17 297 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 DARS2Q6PI48 645 aaKnown RBP18.38■□□□□ 0.53
GCDH-201ENST00000222214 PLD5Q8N7P1 536 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 UHMK1Q8TAS1 419 aaKnown RBP18.38■□□□□ 0.53
GCDH-201ENST00000222214 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 PRCCQ92733 491 aaPredicted RBP18.38■□□□□ 0.53
GCDH-201ENST00000222214 LPPQ93052 612 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 SYT15Q9BQS2 421 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 MIOSQ9NXC5 875 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 STAP1Q9ULZ2 295 aa18.38■□□□□ 0.53
GCDH-201ENST00000222214 A0A087WUV0 522 aaPredicted RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 MOXD2PA6NHM9 499 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 KIF3CO14782 793 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 GNRH1P01148 92 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 ODC1P11926 461 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 IL4RP24394 825 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 NOS2P35228 1153 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 ADIGQ0VDE8 80 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 LPIN1Q14693 890 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 SKIDA1Q1XH10 827 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 MDH1BQ5I0G3 518 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 C4orf22Q6V702 233 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 CLEC20AQ6ZU45 233 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 SIX6OS1Q8N1H7 587 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 LRRC4CQ9HCJ2 640 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 SAYSD1Q9NPB0 183 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 RCOR3Q9P2K3 495 aaPredicted RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 DSEQ9UL01 958 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 SMIM23A6NLE4 172 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 DCDC2CA8MYV0 355 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 ALOX15BO15296 676 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 ATP2C2O75185 946 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 CDH16O75309 829 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 ACAT1P24752 427 aaKnown RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 RPL22P35268 128 aaKnown RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 GDF10P55107 478 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 YWHAZP63104 245 aaKnown RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 CCDC142Q17RM4 750 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 RAB6CQ53S08 254 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 ZC3H12AQ5D1E8 599 aaKnown RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 UBAP2Q5T6F2 1119 aaKnown RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 TTC19Q6DKK2 380 aaPredicted RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 PAQR9Q6ZVX9 377 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 PXYLP1Q8TE99 480 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 RAB6CQ9H0N0 254 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 DNAJC17Q9NVM6 304 aaKnown RBP18.37■□□□□ 0.53
GCDH-201ENST00000222214 AP4E1Q9UPM8 1137 aa18.37■□□□□ 0.53
GCDH-201ENST00000222214 NR2C2P49116 596 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms