RNA–Protein interactions for RNA: ENST00000640154.1

CGREF1-209, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 5 BASIC

Gene CGREF1, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-209ENST00000640154 SHPRHQ149N8 1683 aa17.71■□□□□ 0.42
CGREF1-209ENST00000640154 PLEKHH1Q9ULM0 1364 aa17.69■□□□□ 0.42
CGREF1-209ENST00000640154 DLC1Q96QB1 1528 aa17.69■□□□□ 0.42
CGREF1-209ENST00000640154 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
CGREF1-209ENST00000640154 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
CGREF1-209ENST00000640154 FMN2Q9NZ56 1722 aa17.66■□□□□ 0.42
CGREF1-209ENST00000640154 ORAI2Q96SN7 254 aa17.65■□□□□ 0.42
CGREF1-209ENST00000640154 SPATA31A6Q5VVP1 1343 aa17.65■□□□□ 0.42
CGREF1-209ENST00000640154 KIAA1210Q9ULL0 1709 aa17.64■□□□□ 0.41
CGREF1-209ENST00000640154 DDX17Q92841 729 aaKnown RBP17.63■□□□□ 0.41
CGREF1-209ENST00000640154 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
CGREF1-209ENST00000640154 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
CGREF1-209ENST00000640154 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
CGREF1-209ENST00000640154 RGS17Q9UGC6 210 aaPredicted RBP17.62■□□□□ 0.41
CGREF1-209ENST00000640154 LRP6O75581 1613 aa17.61■□□□□ 0.41
CGREF1-209ENST00000640154 SOS2Q07890 1332 aaPredicted RBP17.61■□□□□ 0.41
CGREF1-209ENST00000640154 ADGRB2O60241 1585 aa17.61■□□□□ 0.41
CGREF1-209ENST00000640154 RGPD8O14715 1765 aaPredicted RBP17.59■□□□□ 0.41
CGREF1-209ENST00000640154 ARHGEF28Q8N1W1 1705 aaKnown RBP17.59■□□□□ 0.41
CGREF1-209ENST00000640154 SOCS7O14512 581 aa17.59■□□□□ 0.41
CGREF1-209ENST00000640154 ESCO1Q5FWF5 840 aa17.59■□□□□ 0.41
CGREF1-209ENST00000640154 POGKQ9P215 609 aa17.59■□□□□ 0.41
CGREF1-209ENST00000640154 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
CGREF1-209ENST00000640154 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
CGREF1-209ENST00000640154 KIF1AQ12756 1690 aa17.58■□□□□ 0.4
CGREF1-209ENST00000640154 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
CGREF1-209ENST00000640154 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
CGREF1-209ENST00000640154 PXDNQ92626 1479 aa17.56■□□□□ 0.4
CGREF1-209ENST00000640154 NUTM2FA1L443 756 aa17.56■□□□□ 0.4
CGREF1-209ENST00000640154 SIN3AQ96ST3 1273 aa17.56■□□□□ 0.4
CGREF1-209ENST00000640154 L3MBTL2Q969R5 705 aa17.55■□□□□ 0.4
CGREF1-209ENST00000640154 ANKARQ7Z5J8 1434 aa17.55■□□□□ 0.4
CGREF1-209ENST00000640154 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
CGREF1-209ENST00000640154 COL22A1Q8NFW1 1626 aaPredicted RBP17.54■□□□□ 0.4
CGREF1-209ENST00000640154 FOXO3O43524 673 aa17.53■□□□□ 0.4
CGREF1-209ENST00000640154 MEX3CQ5U5Q3 659 aaKnown RBP17.52■□□□□ 0.4
CGREF1-209ENST00000640154 POTEAQ6S8J7 498 aa17.52■□□□□ 0.4
CGREF1-209ENST00000640154 MINK1Q8N4C8 1332 aaPredicted RBP17.51■□□□□ 0.39
CGREF1-209ENST00000640154 NUTM2BA6NNL0 878 aaPredicted RBP17.51■□□□□ 0.39
CGREF1-209ENST00000640154 NUTM2EB1AL46 878 aaPredicted RBP17.51■□□□□ 0.39
CGREF1-209ENST00000640154 NBPF1Q3BBV0 1214 aa17.51■□□□□ 0.39
CGREF1-209ENST00000640154 NUTM2AQ8IVF1 878 aaPredicted RBP17.51■□□□□ 0.39
CGREF1-209ENST00000640154 EIF3AQ14152 1382 aaKnown RBP17.51■□□□□ 0.39
CGREF1-209ENST00000640154 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
CGREF1-209ENST00000640154 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
CGREF1-209ENST00000640154 PHF8Q9UPP1 1060 aa17.5■□□□□ 0.39
CGREF1-209ENST00000640154 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
CGREF1-209ENST00000640154 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
CGREF1-209ENST00000640154 TRPM1Q7Z4N2 1603 aa17.49■□□□□ 0.39
CGREF1-209ENST00000640154 XPCQ01831 940 aaPredicted RBP17.48■□□□□ 0.39
CGREF1-209ENST00000640154 ZNF772Q68DY9 489 aaPredicted RBP17.47■□□□□ 0.39
CGREF1-209ENST00000640154 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
CGREF1-209ENST00000640154 KRT28Q7Z3Y7 464 aa17.46■□□□□ 0.39
CGREF1-209ENST00000640154 SPATA31A3Q5VYP0 1347 aa17.46■□□□□ 0.38
CGREF1-209ENST00000640154 ITSN1Q15811 1721 aa17.45■□□□□ 0.38
CGREF1-209ENST00000640154 AFF2P51816 1311 aa17.44■□□□□ 0.38
CGREF1-209ENST00000640154 MARF1Q9Y4F3 1742 aaKnown RBP17.44■□□□□ 0.38
CGREF1-209ENST00000640154 ATP7BP35670 1465 aa17.44■□□□□ 0.38
CGREF1-209ENST00000640154 SBNO1A3KN83 1393 aa17.43■□□□□ 0.38
CGREF1-209ENST00000640154 PSME1Q06323 249 aa17.43■□□□□ 0.38
CGREF1-209ENST00000640154 TNS3Q68CZ2 1445 aa17.43■□□□□ 0.38
CGREF1-209ENST00000640154 TRPM3Q9HCF6 1732 aaPredicted RBP17.42■□□□□ 0.38
CGREF1-209ENST00000640154 PMFBP1Q8TBY8 1022 aa17.42■□□□□ 0.38
CGREF1-209ENST00000640154 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
CGREF1-209ENST00000640154 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
CGREF1-209ENST00000640154 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
CGREF1-209ENST00000640154 NUDT16Q96DE0 195 aaKnown RBP17.41■□□□□ 0.38
CGREF1-209ENST00000640154 CDK19Q9BWU1 502 aa17.41■□□□□ 0.38
CGREF1-209ENST00000640154 TOPAZ1Q8N9V7 1692 aa17.41■□□□□ 0.38
CGREF1-209ENST00000640154 QRICH2Q9H0J4 1663 aa17.41■□□□□ 0.38
CGREF1-209ENST00000640154 GPRASP1Q5JY77 1395 aa17.4■□□□□ 0.38
CGREF1-209ENST00000640154 NBPF8Q3BBV2 869 aa17.39■□□□□ 0.37
CGREF1-209ENST00000640154 NGLY1Q96IV0 654 aa17.39■□□□□ 0.37
CGREF1-209ENST00000640154 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
CGREF1-209ENST00000640154 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.37
CGREF1-209ENST00000640154 TONSLQ96HA7 1378 aa17.39■□□□□ 0.37
CGREF1-209ENST00000640154 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
CGREF1-209ENST00000640154 FNBP4Q8N3X1 1017 aaPredicted RBP17.38■□□□□ 0.37
CGREF1-209ENST00000640154 ABCA3Q99758 1704 aa17.37■□□□□ 0.37
CGREF1-209ENST00000640154 NGDNQ8NEJ9 315 aaKnown RBP17.36■□□□□ 0.37
CGREF1-209ENST00000640154 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
CGREF1-209ENST00000640154 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
CGREF1-209ENST00000640154 PLEKHG3A1L390 1219 aa17.35■□□□□ 0.37
CGREF1-209ENST00000640154 RXRBP28702 533 aa17.35■□□□□ 0.37
CGREF1-209ENST00000640154 POLR3AO14802 1390 aaPredicted RBP17.35■□□□□ 0.37
CGREF1-209ENST00000640154 RALGAPBQ86X10 1494 aa17.35■□□□□ 0.37
CGREF1-209ENST00000640154 QTRT2Q9H974 415 aaKnown RBP17.34■□□□□ 0.37
CGREF1-209ENST00000640154 USP21Q9UK80 565 aa17.33■□□□□ 0.36
CGREF1-209ENST00000640154 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.33■□□□□ 0.36
CGREF1-209ENST00000640154 RBM6P78332 1123 aaKnown RBP17.32■□□□□ 0.36
CGREF1-209ENST00000640154 LMOD2Q6P5Q4 547 aa17.32■□□□□ 0.36
CGREF1-209ENST00000640154 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
CGREF1-209ENST00000640154 ATRNO75882 1429 aa17.31■□□□□ 0.36
CGREF1-209ENST00000640154 ACEP12821 1306 aa17.31■□□□□ 0.36
CGREF1-209ENST00000640154 CRYBG1Q9Y4K1 1723 aa17.31■□□□□ 0.36
CGREF1-209ENST00000640154 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
CGREF1-209ENST00000640154 CABLES1Q8TDN4 633 aa17.31■□□□□ 0.36
CGREF1-209ENST00000640154 TRPC5Q9UL62 973 aaPredicted RBP17.31■□□□□ 0.36
CGREF1-209ENST00000640154 SLIT2O94813 1529 aa17.31■□□□□ 0.36
CGREF1-209ENST00000640154 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms