RNA–Protein interactions for RNA: ENST00000640094.1

HLA-B-257, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 147 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-257ENST00000640094 SOS2Q07890 1332 aaPredicted RBP13.3□□□□□ -0.28
HLA-B-257ENST00000640094 KIF1AQ12756 1690 aa13.29□□□□□ -0.28
HLA-B-257ENST00000640094 PPLO60437 1756 aa13.29□□□□□ -0.28
HLA-B-257ENST00000640094 HFM1A2PYH4 1435 aa13.29□□□□□ -0.28
HLA-B-257ENST00000640094 FNBP4Q8N3X1 1017 aaPredicted RBP13.28□□□□□ -0.28
HLA-B-257ENST00000640094 BLMP54132 1417 aaPredicted RBP13.27□□□□□ -0.29
HLA-B-257ENST00000640094 PXDNQ92626 1479 aa13.27□□□□□ -0.29
HLA-B-257ENST00000640094 USP32Q8NFA0 1604 aa13.27□□□□□ -0.29
HLA-B-257ENST00000640094 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.29
HLA-B-257ENST00000640094 NPHP3Q7Z494 1330 aa13.26□□□□□ -0.29
HLA-B-257ENST00000640094 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
HLA-B-257ENST00000640094 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
HLA-B-257ENST00000640094 PLCH1Q4KWH8 1693 aa13.25□□□□□ -0.29
HLA-B-257ENST00000640094 GLI3P10071 1580 aa13.25□□□□□ -0.29
HLA-B-257ENST00000640094 BCL9LQ86UU0 1499 aa13.25□□□□□ -0.29
HLA-B-257ENST00000640094 ROBO2Q9HCK4 1378 aa13.25□□□□□ -0.29
HLA-B-257ENST00000640094 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
HLA-B-257ENST00000640094 ABCA3Q99758 1704 aa13.23□□□□□ -0.29
HLA-B-257ENST00000640094 FMN2Q9NZ56 1722 aa13.23□□□□□ -0.29
HLA-B-257ENST00000640094 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
HLA-B-257ENST00000640094 RALGAPBQ86X10 1494 aa13.22□□□□□ -0.29
HLA-B-257ENST00000640094 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
HLA-B-257ENST00000640094 SLIT2O94813 1529 aa13.2□□□□□ -0.3
HLA-B-257ENST00000640094 VGFO15240 615 aaPredicted RBP13.2□□□□□ -0.3
HLA-B-257ENST00000640094 SF3B2Q13435 895 aaKnown RBP13.2□□□□□ -0.3
HLA-B-257ENST00000640094 GJD4Q96KN9 370 aaPredicted RBP13.2□□□□□ -0.3
HLA-B-257ENST00000640094 CCDC144AA2RUR9 1427 aa13.2□□□□□ -0.3
HLA-B-257ENST00000640094 RGPD1P0DJD0 1748 aa13.19□□□□□ -0.3
HLA-B-257ENST00000640094 NAIPQ13075 1403 aa13.18□□□□□ -0.3
HLA-B-257ENST00000640094 ESCO1Q5FWF5 840 aa13.17□□□□□ -0.3
HLA-B-257ENST00000640094 TECPR2O15040 1411 aa13.16□□□□□ -0.3
HLA-B-257ENST00000640094 UNC5CLQ8IV45 518 aa13.16□□□□□ -0.3
HLA-B-257ENST00000640094 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
HLA-B-257ENST00000640094 ITGAEP38570 1179 aa13.15□□□□□ -0.3
HLA-B-257ENST00000640094 NRAPQ86VF7 1730 aa13.15□□□□□ -0.3
HLA-B-257ENST00000640094 ADGRB2O60241 1585 aa13.14□□□□□ -0.31
HLA-B-257ENST00000640094 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
HLA-B-257ENST00000640094 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
HLA-B-257ENST00000640094 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
HLA-B-257ENST00000640094 FOXO3O43524 673 aa13.12□□□□□ -0.31
HLA-B-257ENST00000640094 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
HLA-B-257ENST00000640094 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
HLA-B-257ENST00000640094 TNS1Q9HBL0 1735 aaKnown RBP13.12□□□□□ -0.31
HLA-B-257ENST00000640094 SPATA31A3Q5VYP0 1347 aa13.11□□□□□ -0.31
HLA-B-257ENST00000640094 BAG6P46379 1132 aa13.1□□□□□ -0.31
HLA-B-257ENST00000640094 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
HLA-B-257ENST00000640094 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
HLA-B-257ENST00000640094 ARHGEF10O15013 1369 aa13.09□□□□□ -0.31
HLA-B-257ENST00000640094 VPS72Q15906 364 aa13.09□□□□□ -0.31
HLA-B-257ENST00000640094 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
HLA-B-257ENST00000640094 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
HLA-B-257ENST00000640094 CCDC9Q9Y3X0 531 aaKnown RBP13.07□□□□□ -0.32
HLA-B-257ENST00000640094 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
HLA-B-257ENST00000640094 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
HLA-B-257ENST00000640094 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
HLA-B-257ENST00000640094 PIK3C2GO75747 1445 aa13.06□□□□□ -0.32
HLA-B-257ENST00000640094 THSD7AQ9UPZ6 1657 aa13.06□□□□□ -0.32
HLA-B-257ENST00000640094 A0A0G2JS52 829 aa13.06□□□□□ -0.32
HLA-B-257ENST00000640094 MYT1Q01538 1121 aa13.06□□□□□ -0.32
HLA-B-257ENST00000640094 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
HLA-B-257ENST00000640094 ABCC11Q96J66 1382 aa13.06□□□□□ -0.32
HLA-B-257ENST00000640094 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
HLA-B-257ENST00000640094 DISP2A7MBM2 1401 aa13.05□□□□□ -0.32
HLA-B-257ENST00000640094 CRYBG1Q9Y4K1 1723 aa13.05□□□□□ -0.32
HLA-B-257ENST00000640094 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
HLA-B-257ENST00000640094 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
HLA-B-257ENST00000640094 HRCP23327 699 aa13.04□□□□□ -0.32
HLA-B-257ENST00000640094 PSME1Q06323 249 aa13.04□□□□□ -0.32
HLA-B-257ENST00000640094 RREB1Q92766 1687 aa13.04□□□□□ -0.32
HLA-B-257ENST00000640094 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
HLA-B-257ENST00000640094 ONECUT3O60422 494 aaPredicted RBP13.03□□□□□ -0.32
HLA-B-257ENST00000640094 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
HLA-B-257ENST00000640094 STK26Q9P289 416 aa13.03□□□□□ -0.32
HLA-B-257ENST00000640094 PLEKHH1Q9ULM0 1364 aa13.03□□□□□ -0.32
HLA-B-257ENST00000640094 ANKARQ7Z5J8 1434 aa13.03□□□□□ -0.32
HLA-B-257ENST00000640094 ITSN1Q15811 1721 aa13.02□□□□□ -0.32
HLA-B-257ENST00000640094 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
HLA-B-257ENST00000640094 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.33
HLA-B-257ENST00000640094 WAPLQ7Z5K2 1190 aa13.01□□□□□ -0.33
HLA-B-257ENST00000640094 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
HLA-B-257ENST00000640094 ADGRF5Q8IZF2 1346 aa13.01□□□□□ -0.33
HLA-B-257ENST00000640094 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
HLA-B-257ENST00000640094 DLC1Q96QB1 1528 aa12.99□□□□□ -0.33
HLA-B-257ENST00000640094 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
HLA-B-257ENST00000640094 PARD3Q8TEW0 1356 aa12.99□□□□□ -0.33
HLA-B-257ENST00000640094 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
HLA-B-257ENST00000640094 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
HLA-B-257ENST00000640094 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
HLA-B-257ENST00000640094 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
HLA-B-257ENST00000640094 R3HDM1Q15032 1099 aaKnown RBP12.96□□□□□ -0.33
HLA-B-257ENST00000640094 SIRT1Q96EB6 747 aa12.96□□□□□ -0.33
HLA-B-257ENST00000640094 TULP4Q9NRJ4 1543 aa12.96□□□□□ -0.33
HLA-B-257ENST00000640094 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
HLA-B-257ENST00000640094 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
HLA-B-257ENST00000640094 RGPD3A6NKT7 1758 aaPredicted RBP12.95□□□□□ -0.34
HLA-B-257ENST00000640094 RGPD4Q7Z3J3 1758 aa12.95□□□□□ -0.34
HLA-B-257ENST00000640094 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
HLA-B-257ENST00000640094 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
HLA-B-257ENST00000640094 BTG4Q9NY30 223 aa12.95□□□□□ -0.34
HLA-B-257ENST00000640094 TMEM132EQ6IEE7 984 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms