RNA–Protein interactions for RNA: ENST00000639038.1

NECAP1-214, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,423 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-214ENST00000639038 PPP1R15AO75807 674 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-214ENST00000639038 ERVK-7P63135 1459 aa11.2□□□□□ -0.62
NECAP1-214ENST00000639038 SYNMO15061 1565 aa11.2□□□□□ -0.62
NECAP1-214ENST00000639038 FER1L4A9Z1Z3 1794 aa11.2□□□□□ -0.62
NECAP1-214ENST00000639038 L3MBTL2Q969R5 705 aa11.19□□□□□ -0.62
NECAP1-214ENST00000639038 PIK3C2BO00750 1634 aa11.19□□□□□ -0.62
NECAP1-214ENST00000639038 SPATA31E1Q6ZUB1 1445 aa11.19□□□□□ -0.62
NECAP1-214ENST00000639038 SPATA31D1Q6ZQQ2 1576 aa11.19□□□□□ -0.62
NECAP1-214ENST00000639038 ADAMTSL3P82987 1691 aa11.18□□□□□ -0.62
NECAP1-214ENST00000639038 KIF1BO60333 1816 aa11.17□□□□□ -0.62
NECAP1-214ENST00000639038 SLC52A1Q9NWF4 448 aa11.17□□□□□ -0.62
NECAP1-214ENST00000639038 UGGT1Q9NYU2 1555 aa11.17□□□□□ -0.62
NECAP1-214ENST00000639038 FBXO31Q5XUX0 539 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-214ENST00000639038 MFAP1P55081 439 aaKnown RBP11.16□□□□□ -0.62
NECAP1-214ENST00000639038 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
NECAP1-214ENST00000639038 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
NECAP1-214ENST00000639038 E9PSI1 815 aa11.16□□□□□ -0.62
NECAP1-214ENST00000639038 C3P01024 1663 aa11.15□□□□□ -0.62
NECAP1-214ENST00000639038 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
NECAP1-214ENST00000639038 MADDQ8WXG6 1647 aa11.15□□□□□ -0.62
NECAP1-214ENST00000639038 ADGRB3O60242 1522 aa11.15□□□□□ -0.62
NECAP1-214ENST00000639038 APBB1O00213 710 aa11.15□□□□□ -0.63
NECAP1-214ENST00000639038 GTF2E1P29083 439 aaPredicted RBP11.15□□□□□ -0.63
NECAP1-214ENST00000639038 FAM193AP78312 1265 aa11.15□□□□□ -0.63
NECAP1-214ENST00000639038 IDI1Q13907 227 aa11.14□□□□□ -0.63
NECAP1-214ENST00000639038 TMCO4Q5TGY1 634 aa11.14□□□□□ -0.63
NECAP1-214ENST00000639038 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
NECAP1-214ENST00000639038 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
NECAP1-214ENST00000639038 RGL3Q3MIN7 710 aa11.13□□□□□ -0.63
NECAP1-214ENST00000639038 RIMS1Q86UR5 1692 aaKnown RBP11.13□□□□□ -0.63
NECAP1-214ENST00000639038 TNRQ92752 1358 aa11.13□□□□□ -0.63
NECAP1-214ENST00000639038 AEBP1Q8IUX7 1158 aa11.13□□□□□ -0.63
NECAP1-214ENST00000639038 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
NECAP1-214ENST00000639038 DCAF11Q8TEB1 546 aa11.12□□□□□ -0.63
NECAP1-214ENST00000639038 TMEM131LA2VDJ0 1609 aa11.12□□□□□ -0.63
NECAP1-214ENST00000639038 RPGRIP1LQ68CZ1 1315 aa11.12□□□□□ -0.63
NECAP1-214ENST00000639038 PPP4R3CPQ6ZMV5 832 aa11.11□□□□□ -0.63
NECAP1-214ENST00000639038 IFT172Q9UG01 1749 aa11.11□□□□□ -0.63
NECAP1-214ENST00000639038 CEBPAP49715 358 aaPredicted RBP11.1□□□□□ -0.63
NECAP1-214ENST00000639038 NBPF8Q3BBV2 869 aa11.1□□□□□ -0.63
NECAP1-214ENST00000639038 CCDC125Q86Z20 511 aa11.1□□□□□ -0.63
NECAP1-214ENST00000639038 HSP90AB4PQ58FF6 505 aa11.1□□□□□ -0.63
NECAP1-214ENST00000639038 DMRT2Q9Y5R5 561 aa11.1□□□□□ -0.63
NECAP1-214ENST00000639038 NLRP1Q9C000 1473 aa11.1□□□□□ -0.63
NECAP1-214ENST00000639038 KDM5AP29375 1690 aaKnown RBP11.1□□□□□ -0.63
NECAP1-214ENST00000639038 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
NECAP1-214ENST00000639038 CANXP27824 592 aaKnown RBP11.09□□□□□ -0.63
NECAP1-214ENST00000639038 EXOC8Q8IYI6 725 aa11.09□□□□□ -0.63
NECAP1-214ENST00000639038 PRAG1Q86YV5 1406 aa11.09□□□□□ -0.63
NECAP1-214ENST00000639038 MYOM2P54296 1465 aa11.09□□□□□ -0.63
NECAP1-214ENST00000639038 PPLO60437 1756 aa11.09□□□□□ -0.63
NECAP1-214ENST00000639038 MYO5BQ9ULV0 1848 aa11.09□□□□□ -0.63
NECAP1-214ENST00000639038 A2ML1A8K2U0 1454 aa11.08□□□□□ -0.64
NECAP1-214ENST00000639038 PATL2C9JE40 543 aaKnown RBP11.07□□□□□ -0.64
NECAP1-214ENST00000639038 NRXN1Q9ULB1 1477 aa11.07□□□□□ -0.64
NECAP1-214ENST00000639038 NEXMIFQ5QGS0 1516 aa11.07□□□□□ -0.64
NECAP1-214ENST00000639038 RALGAPBQ86X10 1494 aa11.07□□□□□ -0.64
NECAP1-214ENST00000639038 ZFYVE9O95405 1425 aa11.06□□□□□ -0.64
NECAP1-214ENST00000639038 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
NECAP1-214ENST00000639038 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
NECAP1-214ENST00000639038 TMTC2Q8N394 836 aa11.06□□□□□ -0.64
NECAP1-214ENST00000639038 PTPRMP28827 1452 aa11.06□□□□□ -0.64
NECAP1-214ENST00000639038 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
NECAP1-214ENST00000639038 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-214ENST00000639038 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
NECAP1-214ENST00000639038 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
NECAP1-214ENST00000639038 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
NECAP1-214ENST00000639038 LAS1LQ9Y4W2 734 aaKnown RBP11.05□□□□□ -0.64
NECAP1-214ENST00000639038 TRPM1Q7Z4N2 1603 aa11.05□□□□□ -0.64
NECAP1-214ENST00000639038 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
NECAP1-214ENST00000639038 MYO3AQ8NEV4 1616 aa11.04□□□□□ -0.64
NECAP1-214ENST00000639038 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-214ENST00000639038 PHF14O94880 888 aa11.04□□□□□ -0.64
NECAP1-214ENST00000639038 CNGB1Q14028 1251 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-214ENST00000639038 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
NECAP1-214ENST00000639038 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
NECAP1-214ENST00000639038 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
NECAP1-214ENST00000639038 GPRASP1Q5JY77 1395 aa11.03□□□□□ -0.64
NECAP1-214ENST00000639038 CLGNO14967 610 aa11.03□□□□□ -0.64
NECAP1-214ENST00000639038 RIMS2Q9UQ26 1411 aa11.02□□□□□ -0.64
NECAP1-214ENST00000639038 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.65
NECAP1-214ENST00000639038 GZF1Q9H116 711 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-214ENST00000639038 LAMC1P11047 1609 aa11.02□□□□□ -0.65
NECAP1-214ENST00000639038 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.65
NECAP1-214ENST00000639038 PIK3C2GO75747 1445 aa11.02□□□□□ -0.65
NECAP1-214ENST00000639038 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.01□□□□□ -0.65
NECAP1-214ENST00000639038 TMEM2Q9UHN6 1383 aa11.01□□□□□ -0.65
NECAP1-214ENST00000639038 CEP170BQ9Y4F5 1589 aaPredicted RBP11.01□□□□□ -0.65
NECAP1-214ENST00000639038 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
NECAP1-214ENST00000639038 HDGFP51858 240 aaKnown RBP11.01□□□□□ -0.65
NECAP1-214ENST00000639038 SGSM3Q96HU1 749 aa11.01□□□□□ -0.65
NECAP1-214ENST00000639038 RIPOR2Q9Y4F9 1068 aa11□□□□□ -0.65
NECAP1-214ENST00000639038 ROCK2O75116 1388 aaKnown RBP11□□□□□ -0.65
NECAP1-214ENST00000639038 ARHGAP23Q9P227 1491 aa11□□□□□ -0.65
NECAP1-214ENST00000639038 SLIT1O75093 1534 aa11□□□□□ -0.65
NECAP1-214ENST00000639038 THEMISQ8N1K5 641 aaPredicted RBP11□□□□□ -0.65
NECAP1-214ENST00000639038 TRAIPQ9BWF2 469 aa11□□□□□ -0.65
NECAP1-214ENST00000639038 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
NECAP1-214ENST00000639038 NBPF1Q3BBV0 1214 aa10.99□□□□□ -0.65
NECAP1-214ENST00000639038 EIF4G2P78344 907 aaKnown RBP eCLIP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms