RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
SCARB2-214ENST00000638843 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
SCARB2-214ENST00000638843 ADGRL3Q9HAR2 1447 aa13.86□□□□□ -0.19
SCARB2-214ENST00000638843 STAC3Q96MF2 364 aa13.85□□□□□ -0.19
SCARB2-214ENST00000638843 ASXL1Q8IXJ9 1541 aa13.85□□□□□ -0.19
SCARB2-214ENST00000638843 DCCP43146 1447 aa13.84□□□□□ -0.19
SCARB2-214ENST00000638843 YTHDC2Q9H6S0 1430 aaKnown RBP13.84□□□□□ -0.19
SCARB2-214ENST00000638843 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
SCARB2-214ENST00000638843 PLEKHH1Q9ULM0 1364 aa13.83□□□□□ -0.19
SCARB2-214ENST00000638843 TECPR2O15040 1411 aa13.83□□□□□ -0.19
SCARB2-214ENST00000638843 BRINP3Q76B58 766 aa13.83□□□□□ -0.2
SCARB2-214ENST00000638843 MST1RQ04912 1400 aa13.82□□□□□ -0.2
SCARB2-214ENST00000638843 NEUROD1Q13562 356 aa13.82□□□□□ -0.2
SCARB2-214ENST00000638843 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-214ENST00000638843 SAMD1Q6SPF0 538 aaPredicted RBP13.81□□□□□ -0.2
SCARB2-214ENST00000638843 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
SCARB2-214ENST00000638843 SIRT1Q96EB6 747 aa13.81□□□□□ -0.2
SCARB2-214ENST00000638843 ROBO1Q9Y6N7 1651 aa13.8□□□□□ -0.2
SCARB2-214ENST00000638843 DISP3Q9P2K9 1392 aa13.79□□□□□ -0.2
SCARB2-214ENST00000638843 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCARB2-214ENST00000638843 PRAM1Q96QH2 718 aa13.79□□□□□ -0.2
SCARB2-214ENST00000638843 TRAK1Q9UPV9 953 aa13.79□□□□□ -0.2
SCARB2-214ENST00000638843 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
SCARB2-214ENST00000638843 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
SCARB2-214ENST00000638843 ORAI2Q96SN7 254 aa13.78□□□□□ -0.2
SCARB2-214ENST00000638843 ADGRB1O14514 1584 aa13.78□□□□□ -0.2
SCARB2-214ENST00000638843 NBPF1Q3BBV0 1214 aa13.76□□□□□ -0.21
SCARB2-214ENST00000638843 RBM42Q9BTD8 480 aaKnown RBP13.76□□□□□ -0.21
SCARB2-214ENST00000638843 PCGF6Q9BYE7 350 aa13.76□□□□□ -0.21
SCARB2-214ENST00000638843 NALCNQ8IZF0 1738 aa13.76□□□□□ -0.21
SCARB2-214ENST00000638843 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
SCARB2-214ENST00000638843 POGKQ9P215 609 aa13.75□□□□□ -0.21
SCARB2-214ENST00000638843 ESCO1Q5FWF5 840 aa13.73□□□□□ -0.21
SCARB2-214ENST00000638843 LAMC1P11047 1609 aa13.73□□□□□ -0.21
SCARB2-214ENST00000638843 JCADQ9P266 1359 aa13.72□□□□□ -0.21
SCARB2-214ENST00000638843 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
SCARB2-214ENST00000638843 DLC1Q96QB1 1528 aa13.71□□□□□ -0.21
SCARB2-214ENST00000638843 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.21
SCARB2-214ENST00000638843 AHDC1Q5TGY3 1603 aaPredicted RBP13.71□□□□□ -0.22
SCARB2-214ENST00000638843 MINK1Q8N4C8 1332 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-214ENST00000638843 FOXO3O43524 673 aa13.7□□□□□ -0.22
SCARB2-214ENST00000638843 ILDR2Q71H61 639 aa13.7□□□□□ -0.22
SCARB2-214ENST00000638843 MED1Q15648 1581 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-214ENST00000638843 KNDC1Q76NI1 1749 aa13.7□□□□□ -0.22
SCARB2-214ENST00000638843 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-214ENST00000638843 NBPF8Q3BBV2 869 aa13.69□□□□□ -0.22
SCARB2-214ENST00000638843 LRRC59Q96AG4 307 aaKnown RBP13.69□□□□□ -0.22
SCARB2-214ENST00000638843 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-214ENST00000638843 PHLPP1O60346 1717 aa13.68□□□□□ -0.22
SCARB2-214ENST00000638843 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
SCARB2-214ENST00000638843 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-214ENST00000638843 RGS17Q9UGC6 210 aaPredicted RBP13.66□□□□□ -0.22
SCARB2-214ENST00000638843 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
SCARB2-214ENST00000638843 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
SCARB2-214ENST00000638843 SPATA31A6Q5VVP1 1343 aa13.66□□□□□ -0.22
SCARB2-214ENST00000638843 NPHP3Q7Z494 1330 aa13.66□□□□□ -0.22
SCARB2-214ENST00000638843 PHF8Q9UPP1 1060 aa13.65□□□□□ -0.22
SCARB2-214ENST00000638843 PRR36Q9H6K5 1346 aa13.65□□□□□ -0.22
SCARB2-214ENST00000638843 NUTM2BA6NNL0 878 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-214ENST00000638843 NUTM2EB1AL46 878 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-214ENST00000638843 NUTM2AQ8IVF1 878 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-214ENST00000638843 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
SCARB2-214ENST00000638843 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
SCARB2-214ENST00000638843 LRP6O75581 1613 aa13.62□□□□□ -0.23
SCARB2-214ENST00000638843 NHSL1Q5SYE7 1610 aa13.62□□□□□ -0.23
SCARB2-214ENST00000638843 PMFBP1Q8TBY8 1022 aa13.62□□□□□ -0.23
SCARB2-214ENST00000638843 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
SCARB2-214ENST00000638843 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-214ENST00000638843 PXDNQ92626 1479 aa13.62□□□□□ -0.23
SCARB2-214ENST00000638843 KIAA1210Q9ULL0 1709 aa13.61□□□□□ -0.23
SCARB2-214ENST00000638843 ANKARQ7Z5J8 1434 aa13.61□□□□□ -0.23
SCARB2-214ENST00000638843 POLA2Q14181 598 aa13.61□□□□□ -0.23
SCARB2-214ENST00000638843 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
SCARB2-214ENST00000638843 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
SCARB2-214ENST00000638843 ADGRB2O60241 1585 aa13.6□□□□□ -0.23
SCARB2-214ENST00000638843 FMN2Q9NZ56 1722 aa13.6□□□□□ -0.23
SCARB2-214ENST00000638843 MEX3CQ5U5Q3 659 aaKnown RBP13.6□□□□□ -0.23
SCARB2-214ENST00000638843 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
SCARB2-214ENST00000638843 PSME1Q06323 249 aa13.59□□□□□ -0.23
SCARB2-214ENST00000638843 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
SCARB2-214ENST00000638843 EIF3AQ14152 1382 aaKnown RBP13.59□□□□□ -0.23
SCARB2-214ENST00000638843 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
SCARB2-214ENST00000638843 CARD11Q9BXL7 1154 aa13.58□□□□□ -0.23
SCARB2-214ENST00000638843 ARHGEF28Q8N1W1 1705 aaKnown RBP13.58□□□□□ -0.24
SCARB2-214ENST00000638843 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
SCARB2-214ENST00000638843 ADAMTS2O95450 1211 aa13.58□□□□□ -0.24
SCARB2-214ENST00000638843 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
SCARB2-214ENST00000638843 CABP2Q9NPB3 220 aa13.57□□□□□ -0.24
SCARB2-214ENST00000638843 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
SCARB2-214ENST00000638843 USP32Q8NFA0 1604 aa13.57□□□□□ -0.24
SCARB2-214ENST00000638843 SHPRHQ149N8 1683 aa13.56□□□□□ -0.24
SCARB2-214ENST00000638843 ATP7BP35670 1465 aa13.56□□□□□ -0.24
SCARB2-214ENST00000638843 TRPM1Q7Z4N2 1603 aa13.56□□□□□ -0.24
SCARB2-214ENST00000638843 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
SCARB2-214ENST00000638843 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
SCARB2-214ENST00000638843 C8orf37Q96NL8 207 aa13.55□□□□□ -0.24
SCARB2-214ENST00000638843 CCER1Q8TC90 406 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-214ENST00000638843 SBNO1A3KN83 1393 aa13.54□□□□□ -0.24
SCARB2-214ENST00000638843 RALGAPBQ86X10 1494 aa13.54□□□□□ -0.24
SCARB2-214ENST00000638843 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms