RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 CABP2Q9NPB3 220 aa6.22□□□□□ -1.41
GABRA1-220ENST00000638159 CROCC2H7BZ55 1655 aa6.22□□□□□ -1.41
GABRA1-220ENST00000638159 ARHGEF12Q9NZN5 1544 aa6.22□□□□□ -1.41
GABRA1-220ENST00000638159 FNBP4Q8N3X1 1017 aaPredicted RBP6.22□□□□□ -1.41
GABRA1-220ENST00000638159 KIF14Q15058 1648 aa6.22□□□□□ -1.41
GABRA1-220ENST00000638159 CABLES1Q8TDN4 633 aa6.21□□□□□ -1.41
GABRA1-220ENST00000638159 ECE1P42892 770 aa6.21□□□□□ -1.42
GABRA1-220ENST00000638159 ORAI2Q96SN7 254 aa6.21□□□□□ -1.42
GABRA1-220ENST00000638159 HSPA1AP0DMV8 641 aaKnown RBP6.2□□□□□ -1.42
GABRA1-220ENST00000638159 HSPA1BP0DMV9 641 aaKnown RBP6.2□□□□□ -1.42
GABRA1-220ENST00000638159 PIAS4Q8N2W9 510 aaPredicted RBP6.2□□□□□ -1.42
GABRA1-220ENST00000638159 GTF2E1P29083 439 aaPredicted RBP6.2□□□□□ -1.42
GABRA1-220ENST00000638159 ABTB2Q8N961 1025 aa6.2□□□□□ -1.42
GABRA1-220ENST00000638159 RGS12O14924 1447 aa6.19□□□□□ -1.42
GABRA1-220ENST00000638159 RIMS2Q9UQ26 1411 aa6.19□□□□□ -1.42
GABRA1-220ENST00000638159 G3V3G9 751 aa6.19□□□□□ -1.42
GABRA1-220ENST00000638159 LMOD1P29536 600 aaPredicted RBP6.19□□□□□ -1.42
GABRA1-220ENST00000638159 DCAF8Q5TAQ9 597 aa6.19□□□□□ -1.42
GABRA1-220ENST00000638159 CCDC87Q9NVE4 849 aa6.19□□□□□ -1.42
GABRA1-220ENST00000638159 CHRNA2Q15822 529 aa6.19□□□□□ -1.42
GABRA1-220ENST00000638159 PIK3R4Q99570 1358 aa6.18□□□□□ -1.42
GABRA1-220ENST00000638159 DDX54Q8TDD1 881 aaKnown RBP6.18□□□□□ -1.42
GABRA1-220ENST00000638159 POLR1AO95602 1720 aaPredicted RBP6.18□□□□□ -1.42
GABRA1-220ENST00000638159 NCOA2Q15596 1464 aa6.18□□□□□ -1.42
GABRA1-220ENST00000638159 NUTM2GQ5VZR2 741 aa6.18□□□□□ -1.42
GABRA1-220ENST00000638159 PARP3Q9Y6F1 533 aa6.18□□□□□ -1.42
GABRA1-220ENST00000638159 PNPLA6Q8IY17 1366 aa6.18□□□□□ -1.42
GABRA1-220ENST00000638159 KIF15Q9NS87 1388 aa6.18□□□□□ -1.42
GABRA1-220ENST00000638159 DHX57Q6P158 1386 aaKnown RBP6.17□□□□□ -1.42
GABRA1-220ENST00000638159 SLC15A2Q16348 729 aa6.17□□□□□ -1.42
GABRA1-220ENST00000638159 FAM161AQ3B820 660 aa6.17□□□□□ -1.42
GABRA1-220ENST00000638159 EAPPQ56P03 285 aaPredicted RBP6.17□□□□□ -1.42
GABRA1-220ENST00000638159 NCOA3Q9Y6Q9 1424 aa6.17□□□□□ -1.42
GABRA1-220ENST00000638159 RNF17Q9BXT8 1623 aaKnown RBP6.17□□□□□ -1.42
GABRA1-220ENST00000638159 RTEL1-TNFRSF6BF6WH68 1400 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 MAP2K1Q02750 393 aaPredicted RBP6.16□□□□□ -1.42
GABRA1-220ENST00000638159 FSTL1Q12841 308 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 TXNRD1Q16881 649 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 RAPGEF4Q8WZA2 1011 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 RNF181Q9P0P0 153 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 GCC2Q8IWJ2 1684 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 NLRP6P59044 892 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 ARHGEF6Q15052 776 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 MKRN1Q9UHC7 482 aaKnown RBP6.16□□□□□ -1.42
GABRA1-220ENST00000638159 KLRG1Q96E93 195 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 RAPGEF6Q8TEU7 1601 aa6.16□□□□□ -1.42
GABRA1-220ENST00000638159 VEGFAP15692 232 aaPredicted RBP6.15□□□□□ -1.42
GABRA1-220ENST00000638159 ACSBG1Q96GR2 724 aa6.15□□□□□ -1.42
GABRA1-220ENST00000638159 PZPP20742 1482 aa6.15□□□□□ -1.42
GABRA1-220ENST00000638159 NKTRP30414 1462 aaKnown RBP6.15□□□□□ -1.42
GABRA1-220ENST00000638159 KIAA1107Q9UPP5 1409 aa6.15□□□□□ -1.42
GABRA1-220ENST00000638159 ABCA9Q8IUA7 1624 aa6.15□□□□□ -1.42
GABRA1-220ENST00000638159 ZNF644Q9H582 1327 aaPredicted RBP6.15□□□□□ -1.43
GABRA1-220ENST00000638159 MSL1Q68DK7 614 aa6.15□□□□□ -1.43
GABRA1-220ENST00000638159 SLC17A8Q8NDX2 589 aa6.15□□□□□ -1.43
GABRA1-220ENST00000638159 ZMYM4Q5VZL5 1548 aa6.14□□□□□ -1.43
GABRA1-220ENST00000638159 CCDC144AA2RUR9 1427 aa6.14□□□□□ -1.43
GABRA1-220ENST00000638159 LTV1Q96GA3 475 aaPredicted RBP6.14□□□□□ -1.43
GABRA1-220ENST00000638159 CCNL1Q9UK58 526 aaPredicted RBP6.14□□□□□ -1.43
GABRA1-220ENST00000638159 ABCC3O15438 1527 aa6.14□□□□□ -1.43
GABRA1-220ENST00000638159 NUP155O75694 1391 aa6.14□□□□□ -1.43
GABRA1-220ENST00000638159 SMARCC1Q92922 1105 aaPredicted RBP6.14□□□□□ -1.43
GABRA1-220ENST00000638159 ATP7AQ04656 1500 aa6.14□□□□□ -1.43
GABRA1-220ENST00000638159 IQCA1LA6NCM1 817 aa6.14□□□□□ -1.43
GABRA1-220ENST00000638159 PHF14O94880 888 aa6.14□□□□□ -1.43
GABRA1-220ENST00000638159 RBM46Q8TBY0 533 aaKnown RBP6.14□□□□□ -1.43
GABRA1-220ENST00000638159 NUP153P49790 1475 aaKnown RBP6.13□□□□□ -1.43
GABRA1-220ENST00000638159 CCDC141Q6ZP82 1450 aa6.13□□□□□ -1.43
GABRA1-220ENST00000638159 PLEKHG1Q9ULL1 1385 aa6.13□□□□□ -1.43
GABRA1-220ENST00000638159 THRAP3Q9Y2W1 955 aaKnown RBP6.13□□□□□ -1.43
GABRA1-220ENST00000638159 ZNF330Q9Y3S2 320 aaPredicted RBP6.13□□□□□ -1.43
GABRA1-220ENST00000638159 BICDL1Q6ZP65 573 aa6.13□□□□□ -1.43
GABRA1-220ENST00000638159 NEFMP07197 916 aa6.12□□□□□ -1.43
GABRA1-220ENST00000638159 AMPHP49418 695 aa6.12□□□□□ -1.43
GABRA1-220ENST00000638159 EIF4G2P78344 907 aaKnown RBP eCLIP6.12□□□□□ -1.43
GABRA1-220ENST00000638159 TMEM106CQ9BVX2 250 aa6.12□□□□□ -1.43
GABRA1-220ENST00000638159 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.12□□□□□ -1.43
GABRA1-220ENST00000638159 TMC1Q8TDI8 760 aa6.11□□□□□ -1.43
GABRA1-220ENST00000638159 NWD1Q149M9 1564 aa6.11□□□□□ -1.43
GABRA1-220ENST00000638159 ATP10DQ9P241 1426 aa6.11□□□□□ -1.43
GABRA1-220ENST00000638159 RFC4P35249 363 aa6.11□□□□□ -1.43
GABRA1-220ENST00000638159 KDM2AQ9Y2K7 1162 aa6.11□□□□□ -1.43
GABRA1-220ENST00000638159 JDP2Q8WYK2 163 aa6.11□□□□□ -1.43
GABRA1-220ENST00000638159 DALRD3Q5D0E6 543 aaKnown RBP6.1□□□□□ -1.43
GABRA1-220ENST00000638159 KCNH5Q8NCM2 988 aa6.1□□□□□ -1.43
GABRA1-220ENST00000638159 CD2APQ9Y5K6 639 aa6.1□□□□□ -1.43
GABRA1-220ENST00000638159 BRD4O60885 1362 aaPredicted RBP6.1□□□□□ -1.43
GABRA1-220ENST00000638159 DGKZQ13574 1117 aa6.1□□□□□ -1.43
GABRA1-220ENST00000638159 ZNF408Q9H9D4 720 aa6.1□□□□□ -1.43
GABRA1-220ENST00000638159 ADGRL3Q9HAR2 1447 aa6.1□□□□□ -1.43
GABRA1-220ENST00000638159 TTLL12Q14166 644 aaPredicted RBP6.1□□□□□ -1.43
GABRA1-220ENST00000638159 COL13A1Q5TAT6 717 aaPredicted RBP6.09□□□□□ -1.43
GABRA1-220ENST00000638159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.09□□□□□ -1.43
GABRA1-220ENST00000638159 CA12O43570 354 aa6.09□□□□□ -1.43
GABRA1-220ENST00000638159 ZNF622Q969S3 477 aaKnown RBP eCLIP6.09□□□□□ -1.43
GABRA1-220ENST00000638159 ABHD8Q96I13 439 aa6.09□□□□□ -1.43
GABRA1-220ENST00000638159 SETD5Q9C0A6 1442 aa6.09□□□□□ -1.43
GABRA1-220ENST00000638159 ZPR1O75312 459 aa6.09□□□□□ -1.43
GABRA1-220ENST00000638159 MAPK8IP2Q13387 824 aaPredicted RBP6.09□□□□□ -1.43
GABRA1-220ENST00000638159 C9orf131Q5VYM1 1079 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms