RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 METTL3Q86U44 580 aaKnown RBP4.86□□□□□ -1.63
SCN1A-215ENST00000637285 NLRP7Q8WX94 980 aa4.86□□□□□ -1.63
SCN1A-215ENST00000637285 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
SCN1A-215ENST00000637285 GMPRP36959 345 aa4.85□□□□□ -1.63
SCN1A-215ENST00000637285 BRICD5Q6PL45 260 aa4.85□□□□□ -1.63
SCN1A-215ENST00000637285 RNF19BQ6ZMZ0 732 aa4.85□□□□□ -1.63
SCN1A-215ENST00000637285 ZSCAN1Q8NBB4 408 aa4.85□□□□□ -1.63
SCN1A-215ENST00000637285 KCNV2Q8TDN2 545 aa4.85□□□□□ -1.63
SCN1A-215ENST00000637285 KRTAP4-6Q9BYQ5 205 aa4.85□□□□□ -1.63
SCN1A-215ENST00000637285 DAXXQ9UER7 740 aaPredicted RBP4.85□□□□□ -1.63
SCN1A-215ENST00000637285 VEGFBP49765 207 aa4.84□□□□□ -1.63
SCN1A-215ENST00000637285 GCGRP47871 477 aa4.83□□□□□ -1.64
SCN1A-215ENST00000637285 MSS51Q4VC12 460 aa4.83□□□□□ -1.64
SCN1A-215ENST00000637285 CCDC24Q8N4L8 307 aa4.83□□□□□ -1.64
SCN1A-215ENST00000637285 NXF1Q9UBU9 619 aaKnown RBP4.83□□□□□ -1.64
SCN1A-215ENST00000637285 SALL2Q9Y467 1007 aaPredicted RBP4.83□□□□□ -1.64
SCN1A-215ENST00000637285 HIC1Q14526 733 aa4.82□□□□□ -1.64
SCN1A-215ENST00000637285 RC3H1Q5TC82 1133 aaKnown RBP4.82□□□□□ -1.64
SCN1A-215ENST00000637285 IRF7Q92985 503 aa4.82□□□□□ -1.64
SCN1A-215ENST00000637285 REPIN1Q9BWE0 567 aaKnown RBP4.82□□□□□ -1.64
SCN1A-215ENST00000637285 ALDH1A1P00352 501 aa4.81□□□□□ -1.64
SCN1A-215ENST00000637285 GRIPAP1Q4V328 841 aa4.81□□□□□ -1.64
SCN1A-215ENST00000637285 SULF1Q8IWU6 871 aa4.81□□□□□ -1.64
SCN1A-215ENST00000637285 SEMA3EO15041 775 aa4.8□□□□□ -1.64
SCN1A-215ENST00000637285 BMP1P13497 986 aa4.8□□□□□ -1.64
SCN1A-215ENST00000637285 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
SCN1A-215ENST00000637285 SKOR1P84550 965 aa4.8□□□□□ -1.64
SCN1A-215ENST00000637285 Q3C1V9 767 aa4.8□□□□□ -1.64
SCN1A-215ENST00000637285 MMP16P51512 607 aa4.79□□□□□ -1.64
SCN1A-215ENST00000637285 ERBB4Q15303 1308 aa4.78□□□□□ -1.64
SCN1A-215ENST00000637285 H3BM21 787 aa4.78□□□□□ -1.64
SCN1A-215ENST00000637285 GNPATO15228 680 aa4.78□□□□□ -1.64
SCN1A-215ENST00000637285 CAPN5O15484 640 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-215ENST00000637285 SUZ12Q15022 739 aaKnown RBP4.78□□□□□ -1.64
SCN1A-215ENST00000637285 RBM26Q5T8P6 1007 aaKnown RBP4.78□□□□□ -1.64
SCN1A-215ENST00000637285 TRIM46Q7Z4K8 759 aa4.78□□□□□ -1.64
SCN1A-215ENST00000637285 USB1Q9BQ65 265 aaKnown RBP4.78□□□□□ -1.64
SCN1A-215ENST00000637285 TSHZ2Q9NRE2 1034 aa4.78□□□□□ -1.64
SCN1A-215ENST00000637285 DXOO77932 396 aaKnown RBP4.77□□□□□ -1.65
SCN1A-215ENST00000637285 WNT7BP56706 349 aa4.77□□□□□ -1.65
SCN1A-215ENST00000637285 NPAS3Q8IXF0 933 aa4.77□□□□□ -1.65
SCN1A-215ENST00000637285 WASF2Q9Y6W5 498 aa4.77□□□□□ -1.65
SCN1A-215ENST00000637285 PHOX2BQ99453 314 aa4.76□□□□□ -1.65
SCN1A-215ENST00000637285 EHBP1Q8NDI1 1231 aa4.75□□□□□ -1.65
SCN1A-215ENST00000637285 KCTD17Q8N5Z5 321 aa4.74□□□□□ -1.65
SCN1A-215ENST00000637285 HLA-CQ95604 372 aa4.74□□□□□ -1.65
SCN1A-215ENST00000637285 ZFP42Q96MM3 310 aa4.74□□□□□ -1.65
SCN1A-215ENST00000637285 SIAH2O43255 324 aa4.73□□□□□ -1.65
SCN1A-215ENST00000637285 KDM4AO75164 1064 aa4.73□□□□□ -1.65
SCN1A-215ENST00000637285 SOBPA7XYQ1 873 aa4.72□□□□□ -1.65
SCN1A-215ENST00000637285 GPR37O15354 613 aa4.72□□□□□ -1.65
SCN1A-215ENST00000637285 P3H3Q8IVL6 736 aa4.72□□□□□ -1.65
SCN1A-215ENST00000637285 CD46P15529 392 aa4.71□□□□□ -1.66
SCN1A-215ENST00000637285 JUNDP17535 347 aa4.71□□□□□ -1.66
SCN1A-215ENST00000637285 GUCA2AQ02747 115 aa4.71□□□□□ -1.66
SCN1A-215ENST00000637285 SMYD5Q6GMV2 418 aa4.71□□□□□ -1.66
SCN1A-215ENST00000637285 PTCRAQ6ISU1 281 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-215ENST00000637285 SYMPKQ92797 1274 aaKnown RBP4.71□□□□□ -1.66
SCN1A-215ENST00000637285 TESPA1A2RU30 521 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-215ENST00000637285 SCARF1Q14162 830 aa4.7□□□□□ -1.66
SCN1A-215ENST00000637285 PURBQ96QR8 312 aaKnown RBP4.7□□□□□ -1.66
SCN1A-215ENST00000637285 NUDT12Q9BQG2 462 aa4.7□□□□□ -1.66
SCN1A-215ENST00000637285 HOXA2O43364 376 aa4.69□□□□□ -1.66
SCN1A-215ENST00000637285 USP46P62068 366 aa4.69□□□□□ -1.66
SCN1A-215ENST00000637285 SH3BP2P78314 561 aa4.69□□□□□ -1.66
SCN1A-215ENST00000637285 KCNMA1Q12791 1236 aa4.69□□□□□ -1.66
SCN1A-215ENST00000637285 MRPL14Q6P1L8 145 aaKnown RBP4.69□□□□□ -1.66
SCN1A-215ENST00000637285 TLL2Q9Y6L7 1015 aa4.69□□□□□ -1.66
SCN1A-215ENST00000637285 LINC01559Q495D7 138 aa4.68□□□□□ -1.66
SCN1A-215ENST00000637285 TMEM151AQ8N4L1 468 aa4.68□□□□□ -1.66
SCN1A-215ENST00000637285 GDF11O95390 407 aa4.67□□□□□ -1.66
SCN1A-215ENST00000637285 WDR4P57081 412 aaKnown RBP4.67□□□□□ -1.66
SCN1A-215ENST00000637285 MDM2Q00987 491 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-215ENST00000637285 NNTQ13423 1086 aa4.67□□□□□ -1.66
SCN1A-215ENST00000637285 PLEKHG3A1L390 1219 aa4.66□□□□□ -1.66
SCN1A-215ENST00000637285 MAN1A2O60476 641 aa4.66□□□□□ -1.66
SCN1A-215ENST00000637285 VSIG8P0DPA2 414 aa4.66□□□□□ -1.66
SCN1A-215ENST00000637285 GSK3AP49840 483 aa4.66□□□□□ -1.66
SCN1A-215ENST00000637285 C6orf118Q5T5N4 469 aa4.66□□□□□ -1.66
SCN1A-215ENST00000637285 GPIHBP1Q8IV16 184 aa4.66□□□□□ -1.66
SCN1A-215ENST00000637285 BAP1Q92560 729 aa4.66□□□□□ -1.66
SCN1A-215ENST00000637285 C6orf229H3BNL8 230 aa4.65□□□□□ -1.67
SCN1A-215ENST00000637285 CCNYL3P0C7X3 344 aa4.65□□□□□ -1.67
SCN1A-215ENST00000637285 MS4A1P11836 297 aa4.65□□□□□ -1.67
SCN1A-215ENST00000637285 TIMP2P16035 220 aa4.65□□□□□ -1.67
SCN1A-215ENST00000637285 RASSF7Q02833 373 aa4.65□□□□□ -1.67
SCN1A-215ENST00000637285 RETREG3Q86VR2 466 aa4.65□□□□□ -1.67
SCN1A-215ENST00000637285 UNC93B1Q9H1C4 597 aa4.65□□□□□ -1.67
SCN1A-215ENST00000637285 ADH1CP00326 375 aa4.64□□□□□ -1.67
SCN1A-215ENST00000637285 NUTM1Q86Y26 1132 aa4.64□□□□□ -1.67
SCN1A-215ENST00000637285 PPFIA3O75145 1194 aa4.63□□□□□ -1.67
SCN1A-215ENST00000637285 VARSP26640 1264 aaKnown RBP4.63□□□□□ -1.67
SCN1A-215ENST00000637285 ARID5BQ14865 1188 aa4.63□□□□□ -1.67
SCN1A-215ENST00000637285 AMER1Q5JTC6 1135 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-215ENST00000637285 ZIC2O95409 532 aaPredicted RBP4.62□□□□□ -1.67
SCN1A-215ENST00000637285 FDX1P10109 184 aa4.62□□□□□ -1.67
SCN1A-215ENST00000637285 BMP2P12643 396 aa4.62□□□□□ -1.67
SCN1A-215ENST00000637285 ZNF511Q8NB15 262 aa4.62□□□□□ -1.67
SCN1A-215ENST00000637285 CNTNAP3BQ96NU0 1288 aa4.62□□□□□ -1.67
SCN1A-215ENST00000637285 CNTNAP3Q9BZ76 1288 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms