RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	TRAPPC8	Q9Y2L5	1435 aa		5.51	□□□□□ -1.53
LGI1-222	ENST00000636754	DEPDC5	O75140	1603 aa		5.51	□□□□□ -1.53
LGI1-222	ENST00000636754	A2M	P01023	1474 aa		5.5	□□□□□ -1.53
LGI1-222	ENST00000636754	DAPK1	P53355	1430 aa		5.5	□□□□□ -1.53
LGI1-222	ENST00000636754	STAC3	Q96MF2	364 aa		5.5	□□□□□ -1.53
LGI1-222	ENST00000636754	NKX1-1	Q15270	411 aa	Predicted RBP	5.5	□□□□□ -1.53
LGI1-222	ENST00000636754	LMTK2	Q8IWU2	1503 aa		5.5	□□□□□ -1.53
LGI1-222	ENST00000636754	DHX29	Q7Z478	1369 aa	Known RBP	5.49	□□□□□ -1.53
LGI1-222	ENST00000636754	SPAG9	O60271	1321 aa	Known RBP	5.49	□□□□□ -1.53
LGI1-222	ENST00000636754	PRDM15	P57071	1507 aa	Predicted RBP	5.49	□□□□□ -1.53
LGI1-222	ENST00000636754	ARSI	Q5FYB1	569 aa		5.49	□□□□□ -1.53
LGI1-222	ENST00000636754	ABCC5	O15440	1437 aa		5.49	□□□□□ -1.53
LGI1-222	ENST00000636754	KANK4	Q5T7N3	995 aa	Predicted RBP	5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	NPAT	Q14207	1427 aa		5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	GCC2	Q8IWJ2	1684 aa		5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	VWDE	Q8N2E2	1590 aa		5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	ANKRD30A	Q9BXX3	1397 aa		5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	ARID3C	A6NKF2	412 aa		5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	GTPBP6	O43824	516 aa	Predicted RBP	5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	MICALL2	Q8IY33	904 aa		5.48	□□□□□ -1.53
LGI1-222	ENST00000636754	FER1L4	A9Z1Z3	1794 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	UNC13B	O14795	1591 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	RNF25	Q96BH1	459 aa	Predicted RBP	5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	YEATS2	Q9ULM3	1422 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	HR	O43593	1189 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	TSPY4	P0CV99	314 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	TSPY10	P0CW01	314 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	TMEM92	Q6UXU6	159 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	ARHGAP31	Q2M1Z3	1444 aa		5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	KDM5A	P29375	1690 aa	Known RBP	5.47	□□□□□ -1.53
LGI1-222	ENST00000636754	NCOA1	Q15788	1441 aa		5.46	□□□□□ -1.54
LGI1-222	ENST00000636754	EFCAB3	Q8N7B9	438 aa		5.46	□□□□□ -1.54
LGI1-222	ENST00000636754	RPRD2	Q5VT52	1461 aa	Known RBP	5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	SIGLEC1	Q9BZZ2	1709 aa		5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	ARHGAP33	O14559	1287 aa		5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	RAPGEF3	O95398	923 aa		5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	ZNF787	Q6DD87	383 aa		5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	KCTD12	Q96CX2	325 aa	Known RBP	5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	MROH1	Q8NDA8	1641 aa		5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	MADD	Q8WXG6	1647 aa		5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	ZNF142	P52746	1687 aa	Predicted RBP	5.45	□□□□□ -1.54
LGI1-222	ENST00000636754	IQGAP3	Q86VI3	1631 aa		5.44	□□□□□ -1.54
LGI1-222	ENST00000636754	HFM1	A2PYH4	1435 aa		5.44	□□□□□ -1.54
LGI1-222	ENST00000636754	PREX1	Q8TCU6	1659 aa		5.44	□□□□□ -1.54
LGI1-222	ENST00000636754	PODXL2	Q9NZ53	605 aa		5.44	□□□□□ -1.54
LGI1-222	ENST00000636754	KIF15	Q9NS87	1388 aa		5.44	□□□□□ -1.54
LGI1-222	ENST00000636754	TET3	O43151	1660 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	PZP	P20742	1482 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	PTPRM	P28827	1452 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	ABCC3	O15438	1527 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	PSD	A5PKW4	1024 aa	Predicted RBP	5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	HRC	P23327	699 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	AFAP1	Q8N556	730 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	RIMS1	Q86UR5	1692 aa	Known RBP	5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	SPATA31D1	Q6ZQQ2	1576 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	NEURL4	Q96JN8	1562 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	LCE2B	O14633	110 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	HNRNPM	P52272	730 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	BRPF1	P55201	1214 aa	Predicted RBP	5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	POTEE	Q6S8J3	1075 aa		5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	KHSRP	Q92945	711 aa	Known RBP eCLIP	5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	ZNF775	Q96BV0	537 aa	Predicted RBP	5.43	□□□□□ -1.54
LGI1-222	ENST00000636754	CAMSAP1	Q5T5Y3	1602 aa		5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	C3	P01024	1663 aa		5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	KANK1	Q14678	1352 aa		5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	NLRP1	Q9C000	1473 aa		5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	EFCAB6	Q5THR3	1501 aa		5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	SETD1B	Q9UPS6	1966 aa	Known RBP	5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	ZNF777	Q9ULD5	760 aa	Predicted RBP	5.42	□□□□□ -1.54
LGI1-222	ENST00000636754	ZNF644	Q9H582	1327 aa	Predicted RBP	5.41	□□□□□ -1.54
LGI1-222	ENST00000636754	ANKRD50	Q9ULJ7	1429 aa		5.41	□□□□□ -1.54
LGI1-222	ENST00000636754	CLTC	Q00610	1675 aa	Known RBP	5.41	□□□□□ -1.54
LGI1-222	ENST00000636754	PLA2R1	Q13018	1463 aa		5.4	□□□□□ -1.54
LGI1-222	ENST00000636754	LMOD2	Q6P5Q4	547 aa		5.4	□□□□□ -1.54
LGI1-222	ENST00000636754	AXIN2	Q9Y2T1	843 aa		5.4	□□□□□ -1.54
LGI1-222	ENST00000636754	PTPRK	Q15262	1439 aa		5.4	□□□□□ -1.55
LGI1-222	ENST00000636754	SOX12	O15370	315 aa		5.4	□□□□□ -1.55
LGI1-222	ENST00000636754	NAIP	Q13075	1403 aa		5.39	□□□□□ -1.55
LGI1-222	ENST00000636754	KDM4F	A0A1W2PPD8	638 aa		5.39	□□□□□ -1.55
LGI1-222	ENST00000636754	NRG2	O14511	850 aa	Predicted RBP	5.39	□□□□□ -1.55
LGI1-222	ENST00000636754	MYO3A	Q8NEV4	1616 aa		5.39	□□□□□ -1.55
LGI1-222	ENST00000636754	NUDT7	P0C024	238 aa		5.39	□□□□□ -1.55
LGI1-222	ENST00000636754	A2ML1	A8K2U0	1454 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	ERVK-7	P63135	1459 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	PIK3C2B	O00750	1634 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	STK25	O00506	426 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	STK17A	Q9UEE5	414 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	CEP152	O94986	1710 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	NOS1	P29475	1434 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	RIOK3	O14730	519 aa	Known RBP	5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	GFRA3	O60609	400 aa		5.38	□□□□□ -1.55
LGI1-222	ENST00000636754	UHRF1BP1	Q6BDS2	1440 aa		5.37	□□□□□ -1.55
LGI1-222	ENST00000636754	ZMYM3	Q14202	1370 aa		5.37	□□□□□ -1.55
LGI1-222	ENST00000636754	PTPN5	P54829	565 aa		5.37	□□□□□ -1.55
LGI1-222	ENST00000636754	ESF1	Q9H501	851 aa	Known RBP	5.37	□□□□□ -1.55
LGI1-222	ENST00000636754	LHX6	Q9UPM6	363 aa		5.37	□□□□□ -1.55
LGI1-222	ENST00000636754	PTPRT	O14522	1441 aa		5.37	□□□□□ -1.55
LGI1-222	ENST00000636754	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	5.37	□□□□□ -1.55
LGI1-222	ENST00000636754	ARID4B	Q4LE39	1312 aa	Predicted RBP	5.37	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms