RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 BCL9LQ86UU0 1499 aa11.17□□□□□ -0.62
CIITA-214ENST00000636238 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
CIITA-214ENST00000636238 GJD4Q96KN9 370 aaPredicted RBP11.16□□□□□ -0.62
CIITA-214ENST00000636238 ORAI2Q96SN7 254 aa11.16□□□□□ -0.62
CIITA-214ENST00000636238 NALCNQ8IZF0 1738 aa11.15□□□□□ -0.62
CIITA-214ENST00000636238 CDC42BPGQ6DT37 1551 aa11.15□□□□□ -0.62
CIITA-214ENST00000636238 UNC5CLQ8IV45 518 aa11.14□□□□□ -0.63
CIITA-214ENST00000636238 PCGF6Q9BYE7 350 aa11.14□□□□□ -0.63
CIITA-214ENST00000636238 PXDNQ92626 1479 aa11.13□□□□□ -0.63
CIITA-214ENST00000636238 SPHKAPQ2M3C7 1700 aa11.13□□□□□ -0.63
CIITA-214ENST00000636238 TECPR2O15040 1411 aa11.12□□□□□ -0.63
CIITA-214ENST00000636238 TRIM26Q12899 539 aaPredicted RBP11.12□□□□□ -0.63
CIITA-214ENST00000636238 SLIT2O94813 1529 aa11.12□□□□□ -0.63
CIITA-214ENST00000636238 EP400Q96L91 3159 aa11.12□□□□□ -0.63
CIITA-214ENST00000636238 SF3B2Q13435 895 aaKnown RBP11.11□□□□□ -0.63
CIITA-214ENST00000636238 ESCO1Q5FWF5 840 aa11.11□□□□□ -0.63
CIITA-214ENST00000636238 CCDC144AA2RUR9 1427 aa11.1□□□□□ -0.63
CIITA-214ENST00000636238 ONECUT3O60422 494 aaPredicted RBP11.1□□□□□ -0.63
CIITA-214ENST00000636238 RALGAPBQ86X10 1494 aa11.1□□□□□ -0.63
CIITA-214ENST00000636238 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
CIITA-214ENST00000636238 ABCC11Q96J66 1382 aa11.09□□□□□ -0.63
CIITA-214ENST00000636238 VPS72Q15906 364 aa11.09□□□□□ -0.63
CIITA-214ENST00000636238 SIRT1Q96EB6 747 aa11.09□□□□□ -0.63
CIITA-214ENST00000636238 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
CIITA-214ENST00000636238 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
CIITA-214ENST00000636238 FOXO3O43524 673 aa11.08□□□□□ -0.64
CIITA-214ENST00000636238 NAIPQ13075 1403 aa11.08□□□□□ -0.64
CIITA-214ENST00000636238 LRP5O75197 1615 aa11.07□□□□□ -0.64
CIITA-214ENST00000636238 ANKRD30BQ9BXX2 1392 aa11.06□□□□□ -0.64
CIITA-214ENST00000636238 PSME1Q06323 249 aa11.06□□□□□ -0.64
CIITA-214ENST00000636238 SBNO1A3KN83 1393 aa11.05□□□□□ -0.64
CIITA-214ENST00000636238 ARHGEF10O15013 1369 aa11.05□□□□□ -0.64
CIITA-214ENST00000636238 BAG6P46379 1132 aa11.05□□□□□ -0.64
CIITA-214ENST00000636238 SEPT12Q8IYM1 358 aa11.05□□□□□ -0.64
CIITA-214ENST00000636238 GLI3P10071 1580 aa11.04□□□□□ -0.64
CIITA-214ENST00000636238 KRT27Q7Z3Y8 459 aa11.04□□□□□ -0.64
CIITA-214ENST00000636238 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
CIITA-214ENST00000636238 RRBP1Q9P2E9 1410 aaKnown RBP11.03□□□□□ -0.64
CIITA-214ENST00000636238 ITGAEP38570 1179 aa11.03□□□□□ -0.64
CIITA-214ENST00000636238 KIF1AQ12756 1690 aa11.03□□□□□ -0.64
CIITA-214ENST00000636238 KIF1BO60333 1816 aa11.02□□□□□ -0.64
CIITA-214ENST00000636238 USP32Q8NFA0 1604 aa11.02□□□□□ -0.64
CIITA-214ENST00000636238 DISP2A7MBM2 1401 aa11.02□□□□□ -0.64
CIITA-214ENST00000636238 KRT28Q7Z3Y7 464 aa11.02□□□□□ -0.65
CIITA-214ENST00000636238 DEFB132Q7Z7B7 95 aa11.02□□□□□ -0.65
CIITA-214ENST00000636238 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.65
CIITA-214ENST00000636238 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
CIITA-214ENST00000636238 HAP1P54257 671 aaPredicted RBP11.01□□□□□ -0.65
CIITA-214ENST00000636238 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
CIITA-214ENST00000636238 HRCP23327 699 aa11□□□□□ -0.65
CIITA-214ENST00000636238 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
CIITA-214ENST00000636238 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
CIITA-214ENST00000636238 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
CIITA-214ENST00000636238 PARD3Q8TEW0 1356 aa10.99□□□□□ -0.65
CIITA-214ENST00000636238 PIK3C2GO75747 1445 aa10.99□□□□□ -0.65
CIITA-214ENST00000636238 SPATA31E1Q6ZUB1 1445 aa10.99□□□□□ -0.65
CIITA-214ENST00000636238 YTHDC2Q9H6S0 1430 aaKnown RBP10.99□□□□□ -0.65
CIITA-214ENST00000636238 NRXN1Q9ULB1 1477 aa10.99□□□□□ -0.65
CIITA-214ENST00000636238 NWD2Q9ULI1 1742 aa10.98□□□□□ -0.65
CIITA-214ENST00000636238 WAPLQ7Z5K2 1190 aa10.98□□□□□ -0.65
CIITA-214ENST00000636238 ADGRF5Q8IZF2 1346 aa10.98□□□□□ -0.65
CIITA-214ENST00000636238 EIF3AQ14152 1382 aaKnown RBP10.98□□□□□ -0.65
CIITA-214ENST00000636238 CCDC9Q9Y3X0 531 aaKnown RBP10.97□□□□□ -0.65
CIITA-214ENST00000636238 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
CIITA-214ENST00000636238 PPLO60437 1756 aa10.97□□□□□ -0.65
CIITA-214ENST00000636238 FMN2Q9NZ56 1722 aa10.96□□□□□ -0.65
CIITA-214ENST00000636238 C14orf93Q9H972 538 aaKnown RBP10.96□□□□□ -0.65
CIITA-214ENST00000636238 STK26Q9P289 416 aa10.96□□□□□ -0.65
CIITA-214ENST00000636238 DHX57Q6P158 1386 aaKnown RBP10.95□□□□□ -0.66
CIITA-214ENST00000636238 PLEKHH1Q9ULM0 1364 aa10.95□□□□□ -0.66
CIITA-214ENST00000636238 FAM83GA6ND36 823 aa10.95□□□□□ -0.66
CIITA-214ENST00000636238 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
CIITA-214ENST00000636238 GPRASP1Q5JY77 1395 aa10.93□□□□□ -0.66
CIITA-214ENST00000636238 SPATA31A5Q5VU36 1347 aa10.93□□□□□ -0.66
CIITA-214ENST00000636238 SPATA31A7Q8IWB4 1347 aa10.93□□□□□ -0.66
CIITA-214ENST00000636238 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
CIITA-214ENST00000636238 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
CIITA-214ENST00000636238 ADGRB2O60241 1585 aa10.92□□□□□ -0.66
CIITA-214ENST00000636238 A0A0G2JS52 829 aa10.92□□□□□ -0.66
CIITA-214ENST00000636238 PSDA5PKW4 1024 aaPredicted RBP10.92□□□□□ -0.66
CIITA-214ENST00000636238 MYT1Q01538 1121 aa10.92□□□□□ -0.66
CIITA-214ENST00000636238 FAM98CQ17RN3 349 aaKnown RBP10.92□□□□□ -0.66
CIITA-214ENST00000636238 TMEM132EQ6IEE7 984 aa10.92□□□□□ -0.66
CIITA-214ENST00000636238 FAM196AQ6ZSG2 479 aa10.92□□□□□ -0.66
CIITA-214ENST00000636238 CABLES1Q8TDN4 633 aa10.92□□□□□ -0.66
CIITA-214ENST00000636238 BTG4Q9NY30 223 aa10.92□□□□□ -0.66
CIITA-214ENST00000636238 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
CIITA-214ENST00000636238 PLCH1Q4KWH8 1693 aa10.91□□□□□ -0.66
CIITA-214ENST00000636238 EN1Q05925 392 aaPredicted RBP10.9□□□□□ -0.66
CIITA-214ENST00000636238 R3HDM1Q15032 1099 aaKnown RBP10.9□□□□□ -0.66
CIITA-214ENST00000636238 RGL3Q3MIN7 710 aa10.9□□□□□ -0.66
CIITA-214ENST00000636238 STAC3Q96MF2 364 aa10.9□□□□□ -0.66
CIITA-214ENST00000636238 CAMKK2Q96RR4 588 aa10.9□□□□□ -0.66
CIITA-214ENST00000636238 RGPD1P0DJD0 1748 aa10.89□□□□□ -0.67
CIITA-214ENST00000636238 PRAM1Q96QH2 718 aa10.89□□□□□ -0.67
CIITA-214ENST00000636238 COL14A1Q05707 1796 aaKnown RBP10.89□□□□□ -0.67
CIITA-214ENST00000636238 BRWD3Q6RI45 1802 aa10.88□□□□□ -0.67
CIITA-214ENST00000636238 DCAF8L1A6NGE4 600 aa10.88□□□□□ -0.67
CIITA-214ENST00000636238 NBPF8Q3BBV2 869 aa10.88□□□□□ -0.67
CIITA-214ENST00000636238 NBPF14Q5TI25 921 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms