RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 POGKQ9P215 609 aa30.07■■■□□ 2.4
SF1-221ENST00000633899 AHDC1Q5TGY3 1603 aaPredicted RBP30.07■■■□□ 2.4
SF1-221ENST00000633899 C1orf167Q5SNV9 1468 aa30.06■■■□□ 2.4
SF1-221ENST00000633899 DISP3Q9P2K9 1392 aa30.06■■■□□ 2.4
SF1-221ENST00000633899 PRAM1Q96QH2 718 aa30.06■■■□□ 2.4
SF1-221ENST00000633899 TRAK1Q9UPV9 953 aa30.06■■■□□ 2.4
SF1-221ENST00000633899 PCGF6Q9BYE7 350 aa30.05■■■□□ 2.4
SF1-221ENST00000633899 COL16A1Q07092 1604 aaPredicted RBP30.04■■■□□ 2.4
SF1-221ENST00000633899 MED1Q15648 1581 aaPredicted RBP30.03■■■□□ 2.4
SF1-221ENST00000633899 SAFB2Q14151 953 aaKnown RBP eCLIP30.03■■■□□ 2.4
SF1-221ENST00000633899 NHSL1Q5SYE7 1610 aa30.03■■■□□ 2.4
SF1-221ENST00000633899 FMN2Q9NZ56 1722 aa30.01■■■□□ 2.39
SF1-221ENST00000633899 ARHGEF28Q8N1W1 1705 aaKnown RBP30■■■□□ 2.39
SF1-221ENST00000633899 TONSLQ96HA7 1378 aa29.97■■■□□ 2.39
SF1-221ENST00000633899 JCADQ9P266 1359 aa29.97■■■□□ 2.39
SF1-221ENST00000633899 NUTM2FA1L443 756 aa29.96■■■□□ 2.39
SF1-221ENST00000633899 ESCO1Q5FWF5 840 aa29.95■■■□□ 2.39
SF1-221ENST00000633899 ORAI2Q96SN7 254 aa29.95■■■□□ 2.39
SF1-221ENST00000633899 ADGRB2O60241 1585 aa29.93■■■□□ 2.38
SF1-221ENST00000633899 NBPF1Q3BBV0 1214 aa29.92■■■□□ 2.38
SF1-221ENST00000633899 TRPM1Q7Z4N2 1603 aa29.92■■■□□ 2.38
SF1-221ENST00000633899 SHPRHQ149N8 1683 aa29.91■■■□□ 2.38
SF1-221ENST00000633899 MINK1Q8N4C8 1332 aaPredicted RBP29.91■■■□□ 2.38
SF1-221ENST00000633899 RGPD8O14715 1765 aaPredicted RBP29.9■■■□□ 2.38
SF1-221ENST00000633899 DDX17Q92841 729 aaKnown RBP29.9■■■□□ 2.38
SF1-221ENST00000633899 PHF23Q9BUL5 403 aaPredicted RBP29.9■■■□□ 2.38
SF1-221ENST00000633899 HIRIP3Q9BW71 556 aaPredicted RBP29.88■■■□□ 2.37
SF1-221ENST00000633899 KIF1AQ12756 1690 aa29.88■■■□□ 2.37
SF1-221ENST00000633899 LRRC59Q96AG4 307 aaKnown RBP29.87■■■□□ 2.37
SF1-221ENST00000633899 EIF3AQ14152 1382 aaKnown RBP29.86■■■□□ 2.37
SF1-221ENST00000633899 NPHP3Q7Z494 1330 aa29.85■■■□□ 2.37
SF1-221ENST00000633899 ROCK2O75116 1388 aaKnown RBP29.84■■■□□ 2.37
SF1-221ENST00000633899 SPATA31A6Q5VVP1 1343 aa29.83■■■□□ 2.37
SF1-221ENST00000633899 ANKARQ7Z5J8 1434 aa29.81■■■□□ 2.36
SF1-221ENST00000633899 SOS2Q07890 1332 aaPredicted RBP29.8■■■□□ 2.36
SF1-221ENST00000633899 WASLO00401 505 aaPredicted RBP29.8■■■□□ 2.36
SF1-221ENST00000633899 FOXO3O43524 673 aa29.8■■■□□ 2.36
SF1-221ENST00000633899 USP32Q8NFA0 1604 aa29.79■■■□□ 2.36
SF1-221ENST00000633899 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
SF1-221ENST00000633899 PHF8Q9UPP1 1060 aa29.78■■■□□ 2.36
SF1-221ENST00000633899 QRICH2Q9H0J4 1663 aa29.78■■■□□ 2.36
SF1-221ENST00000633899 CENPJQ9HC77 1338 aaPredicted RBP29.77■■■□□ 2.36
SF1-221ENST00000633899 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
SF1-221ENST00000633899 ITSN1Q15811 1721 aa29.76■■■□□ 2.35
SF1-221ENST00000633899 XPCQ01831 940 aaPredicted RBP29.75■■■□□ 2.35
SF1-221ENST00000633899 MEX3CQ5U5Q3 659 aaKnown RBP29.75■■■□□ 2.35
SF1-221ENST00000633899 PNPLA6Q8IY17 1366 aa29.75■■■□□ 2.35
SF1-221ENST00000633899 PXDNQ92626 1479 aa29.74■■■□□ 2.35
SF1-221ENST00000633899 CLSPNQ9HAW4 1339 aa29.74■■■□□ 2.35
SF1-221ENST00000633899 NUTM2BA6NNL0 878 aaPredicted RBP29.74■■■□□ 2.35
SF1-221ENST00000633899 NUTM2EB1AL46 878 aaPredicted RBP29.74■■■□□ 2.35
SF1-221ENST00000633899 NUTM2AQ8IVF1 878 aaPredicted RBP29.74■■■□□ 2.35
SF1-221ENST00000633899 LRP6O75581 1613 aa29.71■■■□□ 2.35
SF1-221ENST00000633899 RALGAPBQ86X10 1494 aa29.71■■■□□ 2.35
SF1-221ENST00000633899 PMFBP1Q8TBY8 1022 aa29.7■■■□□ 2.35
SF1-221ENST00000633899 CDK19Q9BWU1 502 aa29.7■■■□□ 2.35
SF1-221ENST00000633899 GPRASP1Q5JY77 1395 aa29.69■■■□□ 2.34
SF1-221ENST00000633899 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
SF1-221ENST00000633899 PRR36Q9H6K5 1346 aa29.69■■■□□ 2.34
SF1-221ENST00000633899 KRT28Q7Z3Y7 464 aa29.68■■■□□ 2.34
SF1-221ENST00000633899 CARD11Q9BXL7 1154 aa29.68■■■□□ 2.34
SF1-221ENST00000633899 PSME1Q06323 249 aa29.67■■■□□ 2.34
SF1-221ENST00000633899 ATP7BP35670 1465 aa29.67■■■□□ 2.34
SF1-221ENST00000633899 NUDT16Q96DE0 195 aaKnown RBP29.66■■■□□ 2.34
SF1-221ENST00000633899 COL22A1Q8NFW1 1626 aaPredicted RBP29.65■■■□□ 2.34
SF1-221ENST00000633899 SRPK2P78362 688 aaKnown RBP29.64■■■□□ 2.34
SF1-221ENST00000633899 ILDR2Q71H61 639 aa29.64■■■□□ 2.34
SF1-221ENST00000633899 NGDNQ8NEJ9 315 aaKnown RBP29.62■■■□□ 2.33
SF1-221ENST00000633899 TOPAZ1Q8N9V7 1692 aa29.62■■■□□ 2.33
SF1-221ENST00000633899 SPATA31A3Q5VYP0 1347 aa29.6■■■□□ 2.33
SF1-221ENST00000633899 TNS3Q68CZ2 1445 aa29.6■■■□□ 2.33
SF1-221ENST00000633899 TIMELESSQ9UNS1 1208 aa29.59■■■□□ 2.33
SF1-221ENST00000633899 SBNO1A3KN83 1393 aa29.58■■■□□ 2.33
SF1-221ENST00000633899 EVC2Q86UK5 1308 aa29.58■■■□□ 2.33
SF1-221ENST00000633899 RGS17Q9UGC6 210 aaPredicted RBP29.58■■■□□ 2.33
SF1-221ENST00000633899 CCDC61Q9Y6R9 512 aa29.58■■■□□ 2.33
SF1-221ENST00000633899 ADAMTS2O95450 1211 aa29.57■■■□□ 2.32
SF1-221ENST00000633899 LMOD2Q6P5Q4 547 aa29.57■■■□□ 2.32
SF1-221ENST00000633899 CABP2Q9NPB3 220 aa29.57■■■□□ 2.32
SF1-221ENST00000633899 TRPM3Q9HCF6 1732 aaPredicted RBP29.55■■■□□ 2.32
SF1-221ENST00000633899 C8orf37Q96NL8 207 aa29.54■■■□□ 2.32
SF1-221ENST00000633899 ARHGEF10O15013 1369 aa29.53■■■□□ 2.32
SF1-221ENST00000633899 ZNF772Q68DY9 489 aaPredicted RBP29.53■■■□□ 2.32
SF1-221ENST00000633899 MARF1Q9Y4F3 1742 aaKnown RBP29.53■■■□□ 2.32
SF1-221ENST00000633899 PPIP5K1Q6PFW1 1433 aa29.52■■■□□ 2.32
SF1-221ENST00000633899 HAP1P54257 671 aaPredicted RBP29.51■■■□□ 2.31
SF1-221ENST00000633899 PAK3O75914 559 aaPredicted RBP29.5■■■□□ 2.31
SF1-221ENST00000633899 ACEP12821 1306 aa29.49■■■□□ 2.31
SF1-221ENST00000633899 AFF2P51816 1311 aa29.49■■■□□ 2.31
SF1-221ENST00000633899 NGLY1Q96IV0 654 aa29.49■■■□□ 2.31
SF1-221ENST00000633899 ALS2Q96Q42 1657 aa29.49■■■□□ 2.31
SF1-221ENST00000633899 SBNO2Q9Y2G9 1366 aa29.49■■■□□ 2.31
SF1-221ENST00000633899 PLEKHG3A1L390 1219 aa29.48■■■□□ 2.31
SF1-221ENST00000633899 PLEKHG5O94827 1062 aa29.48■■■□□ 2.31
SF1-221ENST00000633899 POTEAQ6S8J7 498 aa29.48■■■□□ 2.31
SF1-221ENST00000633899 POLR3AO14802 1390 aaPredicted RBP29.47■■■□□ 2.31
SF1-221ENST00000633899 ABCA3Q99758 1704 aa29.45■■■□□ 2.3
SF1-221ENST00000633899 ATAD2Q6PL18 1390 aa29.42■■■□□ 2.3
SF1-221ENST00000633899 CABP1Q9NZU7 370 aa29.42■■■□□ 2.3
SF1-221ENST00000633899 CABLES1Q8TDN4 633 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms