RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 NRXN3Q9Y4C0 1643 aa15.29■□□□□ 0.04
SOX2-OT-257ENST00000630553 BCL9LQ86UU0 1499 aa15.28■□□□□ 0.04
SOX2-OT-257ENST00000630553 NUP155O75694 1391 aa15.26■□□□□ 0.03
SOX2-OT-257ENST00000630553 ITGAEP38570 1179 aa15.26■□□□□ 0.03
SOX2-OT-257ENST00000630553 ESCO1Q5FWF5 840 aa15.26■□□□□ 0.03
SOX2-OT-257ENST00000630553 LAMC1P11047 1609 aa15.25■□□□□ 0.03
SOX2-OT-257ENST00000630553 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
SOX2-OT-257ENST00000630553 PSDA5PKW4 1024 aaPredicted RBP15.25■□□□□ 0.03
SOX2-OT-257ENST00000630553 UNC5CLQ8IV45 518 aa15.25■□□□□ 0.03
SOX2-OT-257ENST00000630553 COL22A1Q8NFW1 1626 aaPredicted RBP15.25■□□□□ 0.03
SOX2-OT-257ENST00000630553 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
SOX2-OT-257ENST00000630553 LRP5O75197 1615 aa15.24■□□□□ 0.03
SOX2-OT-257ENST00000630553 MYOM2P54296 1465 aa15.23■□□□□ 0.03
SOX2-OT-257ENST00000630553 FOXO3O43524 673 aa15.22■□□□□ 0.03
SOX2-OT-257ENST00000630553 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
SOX2-OT-257ENST00000630553 RALGAPBQ86X10 1494 aa15.21■□□□□ 0.03
SOX2-OT-257ENST00000630553 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-257ENST00000630553 SEPT12Q8IYM1 358 aa15.21■□□□□ 0.03
SOX2-OT-257ENST00000630553 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-257ENST00000630553 HRCP23327 699 aa15.2■□□□□ 0.02
SOX2-OT-257ENST00000630553 BAG6P46379 1132 aa15.2■□□□□ 0.02
SOX2-OT-257ENST00000630553 HAP1P54257 671 aaPredicted RBP15.2■□□□□ 0.02
SOX2-OT-257ENST00000630553 POTEDQ86YR6 584 aa15.2■□□□□ 0.02
SOX2-OT-257ENST00000630553 ROBO2Q9HCK4 1378 aa15.2■□□□□ 0.02
SOX2-OT-257ENST00000630553 SPHKAPQ2M3C7 1700 aa15.2■□□□□ 0.02
SOX2-OT-257ENST00000630553 A0A0G2JS52 829 aa15.19■□□□□ 0.02
SOX2-OT-257ENST00000630553 MYT1Q01538 1121 aa15.19■□□□□ 0.02
SOX2-OT-257ENST00000630553 LRPPRCP42704 1394 aaKnown RBP15.19■□□□□ 0.02
SOX2-OT-257ENST00000630553 BRWD3Q6RI45 1802 aa15.19■□□□□ 0.02
SOX2-OT-257ENST00000630553 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
SOX2-OT-257ENST00000630553 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-257ENST00000630553 GLI3P10071 1580 aa15.17■□□□□ 0.02
SOX2-OT-257ENST00000630553 NUTM2FA1L443 756 aa15.17■□□□□ 0.02
SOX2-OT-257ENST00000630553 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
SOX2-OT-257ENST00000630553 PXDNQ92626 1479 aa15.16■□□□□ 0.02
SOX2-OT-257ENST00000630553 RAB3GAP2Q9H2M9 1393 aa15.16■□□□□ 0.02
SOX2-OT-257ENST00000630553 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
SOX2-OT-257ENST00000630553 NEXMIFQ5QGS0 1516 aa15.16■□□□□ 0.02
SOX2-OT-257ENST00000630553 SLIT2O94813 1529 aa15.14■□□□□ 0.01
SOX2-OT-257ENST00000630553 YY1P25490 414 aa15.13■□□□□ 0.01
SOX2-OT-257ENST00000630553 VPS72Q15906 364 aa15.13■□□□□ 0.01
SOX2-OT-257ENST00000630553 TRIM26Q12899 539 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-257ENST00000630553 R3HDM1Q15032 1099 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-257ENST00000630553 KIF1BO60333 1816 aa15.12■□□□□ 0.01
SOX2-OT-257ENST00000630553 EN1Q05925 392 aaPredicted RBP15.11■□□□□ 0.01
SOX2-OT-257ENST00000630553 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
SOX2-OT-257ENST00000630553 ONECUT3O60422 494 aaPredicted RBP15.1■□□□□ 0.01
SOX2-OT-257ENST00000630553 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
SOX2-OT-257ENST00000630553 CLTCL1P53675 1640 aa15.1■□□□□ 0.01
SOX2-OT-257ENST00000630553 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
SOX2-OT-257ENST00000630553 CABLES1Q8TDN4 633 aa15.09■□□□□ 0.01
SOX2-OT-257ENST00000630553 CDC42BPGQ6DT37 1551 aa15.08■□□□□ 0
SOX2-OT-257ENST00000630553 USP32Q8NFA0 1604 aa15.08■□□□□ 0
SOX2-OT-257ENST00000630553 STK26Q9P289 416 aa15.08■□□□□ 0
SOX2-OT-257ENST00000630553 PSME1Q06323 249 aa15.07■□□□□ 0
SOX2-OT-257ENST00000630553 FAM98CQ17RN3 349 aaKnown RBP15.07■□□□□ 0
SOX2-OT-257ENST00000630553 CCDC144AA2RUR9 1427 aa15.07■□□□□ 0
SOX2-OT-257ENST00000630553 WAPLQ7Z5K2 1190 aa15.06■□□□□ 0
SOX2-OT-257ENST00000630553 RPGRIP1LQ68CZ1 1315 aa15.06■□□□□ 0
SOX2-OT-257ENST00000630553 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
SOX2-OT-257ENST00000630553 FAM182BQ5T319 152 aa15.05■□□□□ -0
SOX2-OT-257ENST00000630553 PRAG1Q86YV5 1406 aa15.05■□□□□ -0
SOX2-OT-257ENST00000630553 PLCH1Q4KWH8 1693 aa15.04■□□□□ -0
SOX2-OT-257ENST00000630553 NWD2Q9ULI1 1742 aa15.03■□□□□ -0
SOX2-OT-257ENST00000630553 FAM83GA6ND36 823 aa15.03■□□□□ -0
SOX2-OT-257ENST00000630553 EZH2Q15910 746 aaKnown RBP15.02■□□□□ -0
SOX2-OT-257ENST00000630553 RGPD1P0DJD0 1748 aa15.02□□□□□ -0.01
SOX2-OT-257ENST00000630553 TNS3Q68CZ2 1445 aa15.01□□□□□ -0.01
SOX2-OT-257ENST00000630553 KIF1AQ12756 1690 aa15.01□□□□□ -0.01
SOX2-OT-257ENST00000630553 SLC4A1APQ9BWU0 796 aaKnown RBP15.01□□□□□ -0.01
SOX2-OT-257ENST00000630553 BTG4Q9NY30 223 aa15.01□□□□□ -0.01
SOX2-OT-257ENST00000630553 MPHOSPH9Q99550 1183 aa15□□□□□ -0.01
SOX2-OT-257ENST00000630553 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
SOX2-OT-257ENST00000630553 PHF8Q9UPP1 1060 aa15□□□□□ -0.01
SOX2-OT-257ENST00000630553 IFT172Q9UG01 1749 aa15□□□□□ -0.01
SOX2-OT-257ENST00000630553 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
SOX2-OT-257ENST00000630553 TRIM37O94972 964 aa14.97□□□□□ -0.01
SOX2-OT-257ENST00000630553 TMEM132EQ6IEE7 984 aa14.97□□□□□ -0.01
SOX2-OT-257ENST00000630553 PPLO60437 1756 aa14.97□□□□□ -0.01
SOX2-OT-257ENST00000630553 PLEKHH1Q9ULM0 1364 aa14.97□□□□□ -0.01
SOX2-OT-257ENST00000630553 APBA3O96018 575 aa14.96□□□□□ -0.01
SOX2-OT-257ENST00000630553 NBPF8Q3BBV2 869 aa14.96□□□□□ -0.01
SOX2-OT-257ENST00000630553 NBPF14Q5TI25 921 aa14.96□□□□□ -0.01
SOX2-OT-257ENST00000630553 FMN2Q9NZ56 1722 aa14.96□□□□□ -0.01
SOX2-OT-257ENST00000630553 SBNO1A3KN83 1393 aa14.96□□□□□ -0.02
SOX2-OT-257ENST00000630553 ANKRD30BQ9BXX2 1392 aa14.96□□□□□ -0.02
SOX2-OT-257ENST00000630553 DISP2A7MBM2 1401 aa14.95□□□□□ -0.02
SOX2-OT-257ENST00000630553 CAMKK2Q96RR4 588 aa14.95□□□□□ -0.02
SOX2-OT-257ENST00000630553 ADGRF5Q8IZF2 1346 aa14.94□□□□□ -0.02
SOX2-OT-257ENST00000630553 RGL3Q3MIN7 710 aa14.94□□□□□ -0.02
SOX2-OT-257ENST00000630553 FAM196AQ6ZSG2 479 aa14.94□□□□□ -0.02
SOX2-OT-257ENST00000630553 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
SOX2-OT-257ENST00000630553 TECPR2O15040 1411 aa14.93□□□□□ -0.02
SOX2-OT-257ENST00000630553 SPATA31E1Q6ZUB1 1445 aa14.93□□□□□ -0.02
SOX2-OT-257ENST00000630553 PMFBP1Q8TBY8 1022 aa14.93□□□□□ -0.02
SOX2-OT-257ENST00000630553 ABCC11Q96J66 1382 aa14.93□□□□□ -0.02
SOX2-OT-257ENST00000630553 ADGRB2O60241 1585 aa14.93□□□□□ -0.02
SOX2-OT-257ENST00000630553 SPATA31A5Q5VU36 1347 aa14.92□□□□□ -0.02
SOX2-OT-257ENST00000630553 SPATA31A7Q8IWB4 1347 aa14.92□□□□□ -0.02
SOX2-OT-257ENST00000630553 ABCA3Q99758 1704 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms