RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 RPGRIP1LQ68CZ1 1315 aa30.52■■■□□ 2.48
TARDBP-228ENST00000629725 NAIPQ13075 1403 aa30.51■■■□□ 2.47
TARDBP-228ENST00000629725 FOXD1Q16676 465 aa30.51■■■□□ 2.47
TARDBP-228ENST00000629725 PPLO60437 1756 aa30.51■■■□□ 2.47
TARDBP-228ENST00000629725 NPHP3Q7Z494 1330 aa30.49■■■□□ 2.47
TARDBP-228ENST00000629725 ESCO1Q5FWF5 840 aa30.49■■■□□ 2.47
TARDBP-228ENST00000629725 MARF1Q9Y4F3 1742 aaKnown RBP30.49■■■□□ 2.47
TARDBP-228ENST00000629725 MYOM2P54296 1465 aa30.48■■■□□ 2.47
TARDBP-228ENST00000629725 CDC42BPGQ6DT37 1551 aa30.46■■■□□ 2.47
TARDBP-228ENST00000629725 ZRANB1Q9UGI0 708 aa30.46■■■□□ 2.47
TARDBP-228ENST00000629725 BCL9LQ86UU0 1499 aa30.44■■■□□ 2.46
TARDBP-228ENST00000629725 PXDNQ92626 1479 aa30.44■■■□□ 2.46
TARDBP-228ENST00000629725 FOXO3O43524 673 aa30.42■■■□□ 2.46
TARDBP-228ENST00000629725 CCDC125Q86Z20 511 aa30.42■■■□□ 2.46
TARDBP-228ENST00000629725 RRBP1Q9P2E9 1410 aaKnown RBP30.41■■■□□ 2.46
TARDBP-228ENST00000629725 SLC4A1APQ9BWU0 796 aaKnown RBP30.41■■■□□ 2.46
TARDBP-228ENST00000629725 XPCQ01831 940 aaPredicted RBP30.4■■■□□ 2.46
TARDBP-228ENST00000629725 GJD4Q96KN9 370 aaPredicted RBP30.39■■■□□ 2.46
TARDBP-228ENST00000629725 LRPPRCP42704 1394 aaKnown RBP30.39■■■□□ 2.45
TARDBP-228ENST00000629725 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.36■■■□□ 2.45
TARDBP-228ENST00000629725 NUTM2FA1L443 756 aa30.34■■■□□ 2.45
TARDBP-228ENST00000629725 WAPLQ7Z5K2 1190 aa30.32■■■□□ 2.44
TARDBP-228ENST00000629725 STK26Q9P289 416 aa30.32■■■□□ 2.44
TARDBP-228ENST00000629725 TECPR2O15040 1411 aa30.31■■■□□ 2.44
TARDBP-228ENST00000629725 ADGRF5Q8IZF2 1346 aa30.31■■■□□ 2.44
TARDBP-228ENST00000629725 UNC5CLQ8IV45 518 aa30.29■■■□□ 2.44
TARDBP-228ENST00000629725 GLI3P10071 1580 aa30.27■■■□□ 2.44
TARDBP-228ENST00000629725 KNDC1Q76NI1 1749 aa30.27■■■□□ 2.44
TARDBP-228ENST00000629725 SLIT2O94813 1529 aa30.27■■■□□ 2.44
TARDBP-228ENST00000629725 KIF1AQ12756 1690 aa30.27■■■□□ 2.44
TARDBP-228ENST00000629725 SPATA31A3Q5VYP0 1347 aa30.26■■■□□ 2.44
TARDBP-228ENST00000629725 RALGAPBQ86X10 1494 aa30.26■■■□□ 2.44
TARDBP-228ENST00000629725 RGL3Q3MIN7 710 aa30.26■■■□□ 2.43
TARDBP-228ENST00000629725 FMN2Q9NZ56 1722 aa30.26■■■□□ 2.43
TARDBP-228ENST00000629725 IFT172Q9UG01 1749 aa30.25■■■□□ 2.43
TARDBP-228ENST00000629725 CCDC144AA2RUR9 1427 aa30.25■■■□□ 2.43
TARDBP-228ENST00000629725 ABCC11Q96J66 1382 aa30.25■■■□□ 2.43
TARDBP-228ENST00000629725 BLMP54132 1417 aaPredicted RBP30.24■■■□□ 2.43
TARDBP-228ENST00000629725 PLEKHH1Q9ULM0 1364 aa30.24■■■□□ 2.43
TARDBP-228ENST00000629725 BRWD3Q6RI45 1802 aa30.24■■■□□ 2.43
TARDBP-228ENST00000629725 USP32Q8NFA0 1604 aa30.23■■■□□ 2.43
TARDBP-228ENST00000629725 TMEM132EQ6IEE7 984 aa30.23■■■□□ 2.43
TARDBP-228ENST00000629725 ANKRD30BQ9BXX2 1392 aa30.23■■■□□ 2.43
TARDBP-228ENST00000629725 KRT28Q7Z3Y7 464 aa30.2■■■□□ 2.43
TARDBP-228ENST00000629725 SPATA31E1Q6ZUB1 1445 aa30.2■■■□□ 2.42
TARDBP-228ENST00000629725 RGPD8O14715 1765 aaPredicted RBP30.18■■■□□ 2.42
TARDBP-228ENST00000629725 PIK3C2GO75747 1445 aa30.17■■■□□ 2.42
TARDBP-228ENST00000629725 HAP1P54257 671 aaPredicted RBP30.17■■■□□ 2.42
TARDBP-228ENST00000629725 YTHDC2Q9H6S0 1430 aaKnown RBP30.16■■■□□ 2.42
TARDBP-228ENST00000629725 SF3B2Q13435 895 aaKnown RBP30.15■■■□□ 2.42
TARDBP-228ENST00000629725 DEFB132Q7Z7B7 95 aa30.14■■■□□ 2.42
TARDBP-228ENST00000629725 SEPT12Q8IYM1 358 aa30.14■■■□□ 2.42
TARDBP-228ENST00000629725 TNS3Q68CZ2 1445 aa30.13■■■□□ 2.41
TARDBP-228ENST00000629725 PSME1Q06323 249 aa30.13■■■□□ 2.41
TARDBP-228ENST00000629725 PLCH1Q4KWH8 1693 aa30.13■■■□□ 2.41
TARDBP-228ENST00000629725 NWD2Q9ULI1 1742 aa30.13■■■□□ 2.41
TARDBP-228ENST00000629725 VPS72Q15906 364 aa30.12■■■□□ 2.41
TARDBP-228ENST00000629725 PHF8Q9UPP1 1060 aa30.12■■■□□ 2.41
TARDBP-228ENST00000629725 CABLES1Q8TDN4 633 aa30.11■■■□□ 2.41
TARDBP-228ENST00000629725 SIRT1Q96EB6 747 aa30.11■■■□□ 2.41
TARDBP-228ENST00000629725 PLEKHG5O94827 1062 aa30.09■■■□□ 2.41
TARDBP-228ENST00000629725 CCDC9Q9Y3X0 531 aaKnown RBP30.09■■■□□ 2.41
TARDBP-228ENST00000629725 MPHOSPH9Q99550 1183 aa30.08■■■□□ 2.41
TARDBP-228ENST00000629725 ABCA3Q99758 1704 aa30.08■■■□□ 2.41
TARDBP-228ENST00000629725 ONECUT3O60422 494 aaPredicted RBP30.07■■■□□ 2.4
TARDBP-228ENST00000629725 SBNO1A3KN83 1393 aa30.06■■■□□ 2.4
TARDBP-228ENST00000629725 LMOD2Q6P5Q4 547 aa30.06■■■□□ 2.4
TARDBP-228ENST00000629725 KRT27Q7Z3Y8 459 aa30.06■■■□□ 2.4
TARDBP-228ENST00000629725 NRXN1Q9ULB1 1477 aa30.06■■■□□ 2.4
TARDBP-228ENST00000629725 ARHGEF10O15013 1369 aa30.04■■■□□ 2.4
TARDBP-228ENST00000629725 C14orf93Q9H972 538 aaKnown RBP30.04■■■□□ 2.4
TARDBP-228ENST00000629725 DHX57Q6P158 1386 aaKnown RBP30.03■■■□□ 2.4
TARDBP-228ENST00000629725 LRP5O75197 1615 aa30■■■□□ 2.39
TARDBP-228ENST00000629725 FAM83GA6ND36 823 aa29.99■■■□□ 2.39
TARDBP-228ENST00000629725 SAFB2Q14151 953 aaKnown RBP eCLIP29.99■■■□□ 2.39
TARDBP-228ENST00000629725 A0A0G2JS52 829 aa29.98■■■□□ 2.39
TARDBP-228ENST00000629725 MYT1Q01538 1121 aa29.98■■■□□ 2.39
TARDBP-228ENST00000629725 CFAP70Q5T0N1 1121 aa29.98■■■□□ 2.39
TARDBP-228ENST00000629725 PRAM1Q96QH2 718 aa29.98■■■□□ 2.39
TARDBP-228ENST00000629725 PMFBP1Q8TBY8 1022 aa29.96■■■□□ 2.39
TARDBP-228ENST00000629725 BAG6P46379 1132 aa29.95■■■□□ 2.39
TARDBP-228ENST00000629725 NRAPQ86VF7 1730 aa29.95■■■□□ 2.38
TARDBP-228ENST00000629725 FAM98CQ17RN3 349 aaKnown RBP29.93■■■□□ 2.38
TARDBP-228ENST00000629725 POGKQ9P215 609 aa29.93■■■□□ 2.38
TARDBP-228ENST00000629725 ANKARQ7Z5J8 1434 aa29.93■■■□□ 2.38
TARDBP-228ENST00000629725 BTG4Q9NY30 223 aa29.92■■■□□ 2.38
TARDBP-228ENST00000629725 TRPM3Q9HCF6 1732 aaPredicted RBP29.91■■■□□ 2.38
TARDBP-228ENST00000629725 DLC1Q96QB1 1528 aa29.91■■■□□ 2.38
TARDBP-228ENST00000629725 PSDA5PKW4 1024 aaPredicted RBP29.9■■■□□ 2.38
TARDBP-228ENST00000629725 COL14A1Q05707 1796 aaKnown RBP29.9■■■□□ 2.38
TARDBP-228ENST00000629725 ADGRB2O60241 1585 aa29.89■■■□□ 2.38
TARDBP-228ENST00000629725 ALS2Q96Q42 1657 aa29.88■■■□□ 2.37
TARDBP-228ENST00000629725 RGPD1P0DJD0 1748 aa29.87■■■□□ 2.37
TARDBP-228ENST00000629725 HRCP23327 699 aa29.86■■■□□ 2.37
TARDBP-228ENST00000629725 GPRASP1Q5JY77 1395 aa29.86■■■□□ 2.37
TARDBP-228ENST00000629725 ACIN1Q9UKV3 1341 aaKnown RBP29.83■■■□□ 2.37
TARDBP-228ENST00000629725 EN1Q05925 392 aaPredicted RBP29.83■■■□□ 2.37
TARDBP-228ENST00000629725 HIRIP3Q9BW71 556 aaPredicted RBP29.83■■■□□ 2.37
TARDBP-228ENST00000629725 EIF3AQ14152 1382 aaKnown RBP29.8■■■□□ 2.36
TARDBP-228ENST00000629725 SPATA31A5Q5VU36 1347 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms