RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 TMEM132EQ6IEE7 984 aa16.24■□□□□ 0.19
DDX41-219ENST00000629036 JCADQ9P266 1359 aa16.24■□□□□ 0.19
DDX41-219ENST00000629036 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
DDX41-219ENST00000629036 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
DDX41-219ENST00000629036 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
DDX41-219ENST00000629036 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
DDX41-219ENST00000629036 LRP6O75581 1613 aa16.22■□□□□ 0.19
DDX41-219ENST00000629036 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
DDX41-219ENST00000629036 SRCAPQ6ZRS2 3230 aa16.22■□□□□ 0.19
DDX41-219ENST00000629036 STAC3Q96MF2 364 aa16.21■□□□□ 0.19
DDX41-219ENST00000629036 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
DDX41-219ENST00000629036 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
DDX41-219ENST00000629036 C1orf167Q5SNV9 1468 aa16.18■□□□□ 0.18
DDX41-219ENST00000629036 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
DDX41-219ENST00000629036 KDM2AQ9Y2K7 1162 aa16.18■□□□□ 0.18
DDX41-219ENST00000629036 ZNF772Q68DY9 489 aaPredicted RBP16.17■□□□□ 0.18
DDX41-219ENST00000629036 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
DDX41-219ENST00000629036 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
DDX41-219ENST00000629036 SIRT1Q96EB6 747 aa16.17■□□□□ 0.18
DDX41-219ENST00000629036 STK26Q9P289 416 aa16.16■□□□□ 0.18
DDX41-219ENST00000629036 RXRBP28702 533 aa16.15■□□□□ 0.18
DDX41-219ENST00000629036 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.18
DDX41-219ENST00000629036 ATF3P18847 181 aa16.14■□□□□ 0.17
DDX41-219ENST00000629036 BRINP3Q76B58 766 aa16.14■□□□□ 0.17
DDX41-219ENST00000629036 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
DDX41-219ENST00000629036 KIF1AQ12756 1690 aa16.14■□□□□ 0.17
DDX41-219ENST00000629036 TOPAZ1Q8N9V7 1692 aa16.14■□□□□ 0.17
DDX41-219ENST00000629036 SPATA31A6Q5VVP1 1343 aa16.13■□□□□ 0.17
DDX41-219ENST00000629036 NUTM2BA6NNL0 878 aaPredicted RBP16.11■□□□□ 0.17
DDX41-219ENST00000629036 NUTM2EB1AL46 878 aaPredicted RBP16.11■□□□□ 0.17
DDX41-219ENST00000629036 NBPF1Q3BBV0 1214 aa16.11■□□□□ 0.17
DDX41-219ENST00000629036 NUTM2AQ8IVF1 878 aaPredicted RBP16.11■□□□□ 0.17
DDX41-219ENST00000629036 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
DDX41-219ENST00000629036 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
DDX41-219ENST00000629036 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
DDX41-219ENST00000629036 RALGAPBQ86X10 1494 aa16.1■□□□□ 0.17
DDX41-219ENST00000629036 ITSN1Q15811 1721 aa16.09■□□□□ 0.17
DDX41-219ENST00000629036 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
DDX41-219ENST00000629036 PXDNQ92626 1479 aa16.09■□□□□ 0.17
DDX41-219ENST00000629036 COL22A1Q8NFW1 1626 aaPredicted RBP16.08■□□□□ 0.17
DDX41-219ENST00000629036 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
DDX41-219ENST00000629036 TRAK1Q9UPV9 953 aa16.08■□□□□ 0.16
DDX41-219ENST00000629036 TULP4Q9NRJ4 1543 aa16.08■□□□□ 0.16
DDX41-219ENST00000629036 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
DDX41-219ENST00000629036 ATP7BP35670 1465 aa16.06■□□□□ 0.16
DDX41-219ENST00000629036 CDK12Q9NYV4 1490 aaPredicted RBP16.06■□□□□ 0.16
DDX41-219ENST00000629036 AFF2P51816 1311 aa16.06■□□□□ 0.16
DDX41-219ENST00000629036 ORAI2Q96SN7 254 aa16.06■□□□□ 0.16
DDX41-219ENST00000629036 ANKARQ7Z5J8 1434 aa16.05■□□□□ 0.16
DDX41-219ENST00000629036 ABCA3Q99758 1704 aa16.05■□□□□ 0.16
DDX41-219ENST00000629036 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
DDX41-219ENST00000629036 RGS12O14924 1447 aa16.03■□□□□ 0.16
DDX41-219ENST00000629036 PRR36Q9H6K5 1346 aa16.03■□□□□ 0.16
DDX41-219ENST00000629036 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX41-219ENST00000629036 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.16
DDX41-219ENST00000629036 CRYBG1Q9Y4K1 1723 aa16.02■□□□□ 0.16
DDX41-219ENST00000629036 TONSLQ96HA7 1378 aa16.02■□□□□ 0.16
DDX41-219ENST00000629036 ALS2Q96Q42 1657 aa16.02■□□□□ 0.16
DDX41-219ENST00000629036 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.16
DDX41-219ENST00000629036 CLSPNQ9HAW4 1339 aa16.02■□□□□ 0.16
DDX41-219ENST00000629036 MINK1Q8N4C8 1332 aaPredicted RBP16■□□□□ 0.15
DDX41-219ENST00000629036 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
DDX41-219ENST00000629036 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
DDX41-219ENST00000629036 HIRIP3Q9BW71 556 aaPredicted RBP15.99■□□□□ 0.15
DDX41-219ENST00000629036 POGKQ9P215 609 aa15.99■□□□□ 0.15
DDX41-219ENST00000629036 NUTM2FA1L443 756 aa15.98■□□□□ 0.15
DDX41-219ENST00000629036 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
DDX41-219ENST00000629036 QTRT2Q9H974 415 aaKnown RBP15.98■□□□□ 0.15
DDX41-219ENST00000629036 WASLO00401 505 aaPredicted RBP15.97■□□□□ 0.15
DDX41-219ENST00000629036 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
DDX41-219ENST00000629036 CENPJQ9HC77 1338 aaPredicted RBP15.95■□□□□ 0.14
DDX41-219ENST00000629036 AKAP12Q02952 1782 aa15.95■□□□□ 0.14
DDX41-219ENST00000629036 ESCO1Q5FWF5 840 aa15.95■□□□□ 0.14
DDX41-219ENST00000629036 ZRANB1Q9UGI0 708 aa15.95■□□□□ 0.14
DDX41-219ENST00000629036 EIF3AQ14152 1382 aaKnown RBP15.95■□□□□ 0.14
DDX41-219ENST00000629036 SBNO2Q9Y2G9 1366 aa15.95■□□□□ 0.14
DDX41-219ENST00000629036 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
DDX41-219ENST00000629036 EP400Q96L91 3159 aa15.94■□□□□ 0.14
DDX41-219ENST00000629036 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
DDX41-219ENST00000629036 ATAD2Q6PL18 1390 aa15.92■□□□□ 0.14
DDX41-219ENST00000629036 FOXO3O43524 673 aa15.92■□□□□ 0.14
DDX41-219ENST00000629036 PHF8Q9UPP1 1060 aa15.92■□□□□ 0.14
DDX41-219ENST00000629036 TNS3Q68CZ2 1445 aa15.91■□□□□ 0.14
DDX41-219ENST00000629036 MON2Q7Z3U7 1717 aa15.91■□□□□ 0.14
DDX41-219ENST00000629036 PHRF1Q9P1Y6 1649 aaKnown RBP15.9■□□□□ 0.14
DDX41-219ENST00000629036 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
DDX41-219ENST00000629036 ADAMTS2O95450 1211 aa15.9■□□□□ 0.14
DDX41-219ENST00000629036 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
DDX41-219ENST00000629036 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
DDX41-219ENST00000629036 CDK19Q9BWU1 502 aa15.9■□□□□ 0.14
DDX41-219ENST00000629036 SBNO1A3KN83 1393 aa15.89■□□□□ 0.13
DDX41-219ENST00000629036 NGLY1Q96IV0 654 aa15.89■□□□□ 0.13
DDX41-219ENST00000629036 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
DDX41-219ENST00000629036 NUDT16Q96DE0 195 aaKnown RBP15.88■□□□□ 0.13
DDX41-219ENST00000629036 TIMELESSQ9UNS1 1208 aa15.88■□□□□ 0.13
DDX41-219ENST00000629036 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
DDX41-219ENST00000629036 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
DDX41-219ENST00000629036 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
DDX41-219ENST00000629036 CARD11Q9BXL7 1154 aa15.86■□□□□ 0.13
DDX41-219ENST00000629036 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms