RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
TMCO1-209ENST00000628579 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
TMCO1-209ENST00000628579 LRP6O75581 1613 aa15.37■□□□□ 0.05
TMCO1-209ENST00000628579 DCAF11Q8TEB1 546 aa15.37■□□□□ 0.05
TMCO1-209ENST00000628579 ORAI2Q96SN7 254 aa15.37■□□□□ 0.05
TMCO1-209ENST00000628579 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
TMCO1-209ENST00000628579 ADGRB1O14514 1584 aa15.35■□□□□ 0.05
TMCO1-209ENST00000628579 SPATA31A6Q5VVP1 1343 aa15.34■□□□□ 0.05
TMCO1-209ENST00000628579 NUTM2FA1L443 756 aa15.33■□□□□ 0.04
TMCO1-209ENST00000628579 SAFB2Q14151 953 aaKnown RBP eCLIP15.32■□□□□ 0.04
TMCO1-209ENST00000628579 POTEAQ6S8J7 498 aa15.32■□□□□ 0.04
TMCO1-209ENST00000628579 NUTM2BA6NNL0 878 aaPredicted RBP15.31■□□□□ 0.04
TMCO1-209ENST00000628579 NUTM2EB1AL46 878 aaPredicted RBP15.31■□□□□ 0.04
TMCO1-209ENST00000628579 ESCO1Q5FWF5 840 aa15.31■□□□□ 0.04
TMCO1-209ENST00000628579 NUTM2AQ8IVF1 878 aaPredicted RBP15.31■□□□□ 0.04
TMCO1-209ENST00000628579 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
TMCO1-209ENST00000628579 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
TMCO1-209ENST00000628579 PRAM1Q96QH2 718 aa15.31■□□□□ 0.04
TMCO1-209ENST00000628579 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
TMCO1-209ENST00000628579 PNPLA6Q8IY17 1366 aa15.3■□□□□ 0.04
TMCO1-209ENST00000628579 DLC1Q96QB1 1528 aa15.3■□□□□ 0.04
TMCO1-209ENST00000628579 SOS2Q07890 1332 aaPredicted RBP15.29■□□□□ 0.04
TMCO1-209ENST00000628579 MEX3CQ5U5Q3 659 aaKnown RBP15.29■□□□□ 0.04
TMCO1-209ENST00000628579 TRAK1Q9UPV9 953 aa15.29■□□□□ 0.04
TMCO1-209ENST00000628579 STAC3Q96MF2 364 aa15.28■□□□□ 0.04
TMCO1-209ENST00000628579 FOXO3O43524 673 aa15.27■□□□□ 0.04
TMCO1-209ENST00000628579 XPCQ01831 940 aaPredicted RBP15.27■□□□□ 0.04
TMCO1-209ENST00000628579 PXDNQ92626 1479 aa15.27■□□□□ 0.03
TMCO1-209ENST00000628579 RGPD8O14715 1765 aaPredicted RBP15.26■□□□□ 0.03
TMCO1-209ENST00000628579 POGKQ9P215 609 aa15.26■□□□□ 0.03
TMCO1-209ENST00000628579 NPHP3Q7Z494 1330 aa15.25■□□□□ 0.03
TMCO1-209ENST00000628579 HIRIP3Q9BW71 556 aaPredicted RBP15.24■□□□□ 0.03
TMCO1-209ENST00000628579 ADGRB2O60241 1585 aa15.24■□□□□ 0.03
TMCO1-209ENST00000628579 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
TMCO1-209ENST00000628579 MINK1Q8N4C8 1332 aaPredicted RBP15.23■□□□□ 0.03
TMCO1-209ENST00000628579 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
TMCO1-209ENST00000628579 USP32Q8NFA0 1604 aa15.23■□□□□ 0.03
TMCO1-209ENST00000628579 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
TMCO1-209ENST00000628579 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.03
TMCO1-209ENST00000628579 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
TMCO1-209ENST00000628579 C8orf37Q96NL8 207 aa15.21■□□□□ 0.03
TMCO1-209ENST00000628579 AFF2P51816 1311 aa15.2■□□□□ 0.02
TMCO1-209ENST00000628579 ADAMTS2O95450 1211 aa15.2■□□□□ 0.02
TMCO1-209ENST00000628579 NBPF1Q3BBV0 1214 aa15.2■□□□□ 0.02
TMCO1-209ENST00000628579 ZNF772Q68DY9 489 aaPredicted RBP15.2■□□□□ 0.02
TMCO1-209ENST00000628579 L3MBTL2Q969R5 705 aa15.2■□□□□ 0.02
TMCO1-209ENST00000628579 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
TMCO1-209ENST00000628579 NEUROD1Q13562 356 aa15.19■□□□□ 0.02
TMCO1-209ENST00000628579 ANKARQ7Z5J8 1434 aa15.18■□□□□ 0.02
TMCO1-209ENST00000628579 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
TMCO1-209ENST00000628579 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
TMCO1-209ENST00000628579 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
TMCO1-209ENST00000628579 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
TMCO1-209ENST00000628579 SPATA31A3Q5VYP0 1347 aa15.17■□□□□ 0.02
TMCO1-209ENST00000628579 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
TMCO1-209ENST00000628579 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
TMCO1-209ENST00000628579 NGLY1Q96IV0 654 aa15.15■□□□□ 0.02
TMCO1-209ENST00000628579 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
TMCO1-209ENST00000628579 PSME1Q06323 249 aa15.13■□□□□ 0.01
TMCO1-209ENST00000628579 ATP7BP35670 1465 aa15.13■□□□□ 0.01
TMCO1-209ENST00000628579 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
TMCO1-209ENST00000628579 MARF1Q9Y4F3 1742 aaKnown RBP15.12■□□□□ 0.01
TMCO1-209ENST00000628579 RXRBP28702 533 aa15.12■□□□□ 0.01
TMCO1-209ENST00000628579 TRPM1Q7Z4N2 1603 aa15.12■□□□□ 0.01
TMCO1-209ENST00000628579 TRPM3Q9HCF6 1732 aaPredicted RBP15.12■□□□□ 0.01
TMCO1-209ENST00000628579 SBNO1A3KN83 1393 aa15.11■□□□□ 0.01
TMCO1-209ENST00000628579 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
TMCO1-209ENST00000628579 QTRT2Q9H974 415 aaKnown RBP15.11■□□□□ 0.01
TMCO1-209ENST00000628579 LMOD2Q6P5Q4 547 aa15.1■□□□□ 0.01
TMCO1-209ENST00000628579 FNBP4Q8N3X1 1017 aaPredicted RBP15.1■□□□□ 0.01
TMCO1-209ENST00000628579 CABLES1Q8TDN4 633 aa15.1■□□□□ 0.01
TMCO1-209ENST00000628579 NUDT16Q96DE0 195 aaKnown RBP15.1■□□□□ 0.01
TMCO1-209ENST00000628579 CDK19Q9BWU1 502 aa15.1■□□□□ 0.01
TMCO1-209ENST00000628579 USP21Q9UK80 565 aa15.1■□□□□ 0.01
TMCO1-209ENST00000628579 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
TMCO1-209ENST00000628579 CENPJQ9HC77 1338 aaPredicted RBP15.09■□□□□ 0.01
TMCO1-209ENST00000628579 TOPAZ1Q8N9V7 1692 aa15.09■□□□□ 0.01
TMCO1-209ENST00000628579 QRICH2Q9H0J4 1663 aa15.09■□□□□ 0.01
TMCO1-209ENST00000628579 ABCA3Q99758 1704 aa15.09■□□□□ 0.01
TMCO1-209ENST00000628579 ARHGEF10O15013 1369 aa15.08■□□□□ 0
TMCO1-209ENST00000628579 GPRASP1Q5JY77 1395 aa15.08■□□□□ 0
TMCO1-209ENST00000628579 BCL9LQ86UU0 1499 aa15.08■□□□□ 0
TMCO1-209ENST00000628579 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0
TMCO1-209ENST00000628579 ALS2Q96Q42 1657 aa15.07■□□□□ 0
TMCO1-209ENST00000628579 RBM6P78332 1123 aaKnown RBP15.07■□□□□ 0
TMCO1-209ENST00000628579 NBPF8Q3BBV2 869 aa15.07■□□□□ 0
TMCO1-209ENST00000628579 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
TMCO1-209ENST00000628579 ROCK2O75116 1388 aaKnown RBP15.07■□□□□ 0
TMCO1-209ENST00000628579 RGS12O14924 1447 aa15.07■□□□□ 0
TMCO1-209ENST00000628579 ATRNO75882 1429 aa15.06■□□□□ 0
TMCO1-209ENST00000628579 HAP1P54257 671 aaPredicted RBP15.05■□□□□ -0
TMCO1-209ENST00000628579 TRPC5Q9UL62 973 aaPredicted RBP15.05■□□□□ -0
TMCO1-209ENST00000628579 SLIT2O94813 1529 aa15.04■□□□□ -0
TMCO1-209ENST00000628579 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
TMCO1-209ENST00000628579 POLR3AO14802 1390 aaPredicted RBP15.03■□□□□ -0
TMCO1-209ENST00000628579 TONSLQ96HA7 1378 aa15.03■□□□□ -0
TMCO1-209ENST00000628579 SRPK2P78362 688 aaKnown RBP15.03■□□□□ -0
TMCO1-209ENST00000628579 CABP2Q9NPB3 220 aa15.03■□□□□ -0
TMCO1-209ENST00000628579 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
TMCO1-209ENST00000628579 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms