RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 TRAK1Q9UPV9 953 aa19.55■□□□□ 0.72
SOX2-OT-248ENST00000628496 PRAM1Q96QH2 718 aa19.54■□□□□ 0.72
SOX2-OT-248ENST00000628496 KIAA1210Q9ULL0 1709 aa19.54■□□□□ 0.72
SOX2-OT-248ENST00000628496 ROBO1Q9Y6N7 1651 aa19.53■□□□□ 0.72
SOX2-OT-248ENST00000628496 NBPF8Q3BBV2 869 aa19.52■□□□□ 0.72
SOX2-OT-248ENST00000628496 CDC42BPGQ6DT37 1551 aa19.52■□□□□ 0.71
SOX2-OT-248ENST00000628496 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
SOX2-OT-248ENST00000628496 SAFB2Q14151 953 aaKnown RBP eCLIP19.5■□□□□ 0.71
SOX2-OT-248ENST00000628496 C1orf167Q5SNV9 1468 aa19.49■□□□□ 0.71
SOX2-OT-248ENST00000628496 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
SOX2-OT-248ENST00000628496 POGKQ9P215 609 aa19.49■□□□□ 0.71
SOX2-OT-248ENST00000628496 TRPM1Q7Z4N2 1603 aa19.48■□□□□ 0.71
SOX2-OT-248ENST00000628496 CCER1Q8TC90 406 aaPredicted RBP19.47■□□□□ 0.71
SOX2-OT-248ENST00000628496 ARHGEF28Q8N1W1 1705 aaKnown RBP19.46■□□□□ 0.71
SOX2-OT-248ENST00000628496 ROCK2O75116 1388 aaKnown RBP19.44■□□□□ 0.7
SOX2-OT-248ENST00000628496 ADGRB2O60241 1585 aa19.44■□□□□ 0.7
SOX2-OT-248ENST00000628496 HIRIP3Q9BW71 556 aaPredicted RBP19.43■□□□□ 0.7
SOX2-OT-248ENST00000628496 MINK1Q8N4C8 1332 aaPredicted RBP19.43■□□□□ 0.7
SOX2-OT-248ENST00000628496 GPRASP1Q5JY77 1395 aa19.43■□□□□ 0.7
SOX2-OT-248ENST00000628496 RALGAPBQ86X10 1494 aa19.42■□□□□ 0.7
SOX2-OT-248ENST00000628496 NUTM2FA1L443 756 aa19.42■□□□□ 0.7
SOX2-OT-248ENST00000628496 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
SOX2-OT-248ENST00000628496 AHDC1Q5TGY3 1603 aaPredicted RBP19.42■□□□□ 0.7
SOX2-OT-248ENST00000628496 FMN2Q9NZ56 1722 aa19.41■□□□□ 0.7
SOX2-OT-248ENST00000628496 DDX17Q92841 729 aaKnown RBP19.39■□□□□ 0.69
SOX2-OT-248ENST00000628496 COL16A1Q07092 1604 aaPredicted RBP19.39■□□□□ 0.69
SOX2-OT-248ENST00000628496 PHLPP1O60346 1717 aa19.38■□□□□ 0.69
SOX2-OT-248ENST00000628496 CENPJQ9HC77 1338 aaPredicted RBP19.38■□□□□ 0.69
SOX2-OT-248ENST00000628496 TIMELESSQ9UNS1 1208 aa19.38■□□□□ 0.69
SOX2-OT-248ENST00000628496 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
SOX2-OT-248ENST00000628496 NHSL1Q5SYE7 1610 aa19.36■□□□□ 0.69
SOX2-OT-248ENST00000628496 WASLO00401 505 aaPredicted RBP19.36■□□□□ 0.69
SOX2-OT-248ENST00000628496 CARD11Q9BXL7 1154 aa19.35■□□□□ 0.69
SOX2-OT-248ENST00000628496 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
SOX2-OT-248ENST00000628496 ANKARQ7Z5J8 1434 aa19.34■□□□□ 0.69
SOX2-OT-248ENST00000628496 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
SOX2-OT-248ENST00000628496 USP32Q8NFA0 1604 aa19.34■□□□□ 0.69
SOX2-OT-248ENST00000628496 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
SOX2-OT-248ENST00000628496 JCADQ9P266 1359 aa19.32■□□□□ 0.68
SOX2-OT-248ENST00000628496 QRICH2Q9H0J4 1663 aa19.31■□□□□ 0.68
SOX2-OT-248ENST00000628496 CDK19Q9BWU1 502 aa19.31■□□□□ 0.68
SOX2-OT-248ENST00000628496 SOS2Q07890 1332 aaPredicted RBP19.3■□□□□ 0.68
SOX2-OT-248ENST00000628496 ATP7BP35670 1465 aa19.3■□□□□ 0.68
SOX2-OT-248ENST00000628496 FOXO3O43524 673 aa19.3■□□□□ 0.68
SOX2-OT-248ENST00000628496 PHF8Q9UPP1 1060 aa19.3■□□□□ 0.68
SOX2-OT-248ENST00000628496 PXDNQ92626 1479 aa19.29■□□□□ 0.68
SOX2-OT-248ENST00000628496 NPHP3Q7Z494 1330 aa19.29■□□□□ 0.68
SOX2-OT-248ENST00000628496 KIF1AQ12756 1690 aa19.29■□□□□ 0.68
SOX2-OT-248ENST00000628496 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
SOX2-OT-248ENST00000628496 XPCQ01831 940 aaPredicted RBP19.27■□□□□ 0.68
SOX2-OT-248ENST00000628496 LRRC59Q96AG4 307 aaKnown RBP19.27■□□□□ 0.68
SOX2-OT-248ENST00000628496 NUDT16Q96DE0 195 aaKnown RBP19.27■□□□□ 0.68
SOX2-OT-248ENST00000628496 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
SOX2-OT-248ENST00000628496 RGPD8O14715 1765 aaPredicted RBP19.25■□□□□ 0.67
SOX2-OT-248ENST00000628496 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
SOX2-OT-248ENST00000628496 SBNO2Q9Y2G9 1366 aa19.25■□□□□ 0.67
SOX2-OT-248ENST00000628496 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
SOX2-OT-248ENST00000628496 SRPK2P78362 688 aaKnown RBP19.24■□□□□ 0.67
SOX2-OT-248ENST00000628496 CABP2Q9NPB3 220 aa19.24■□□□□ 0.67
SOX2-OT-248ENST00000628496 SPATA31A6Q5VVP1 1343 aa19.23■□□□□ 0.67
SOX2-OT-248ENST00000628496 EVC2Q86UK5 1308 aa19.23■□□□□ 0.67
SOX2-OT-248ENST00000628496 KRT28Q7Z3Y7 464 aa19.22■□□□□ 0.67
SOX2-OT-248ENST00000628496 LRP6O75581 1613 aa19.22■□□□□ 0.67
SOX2-OT-248ENST00000628496 USP47Q96K76 1375 aa19.21■□□□□ 0.67
SOX2-OT-248ENST00000628496 TOPAZ1Q8N9V7 1692 aa19.21■□□□□ 0.67
SOX2-OT-248ENST00000628496 CCDC61Q9Y6R9 512 aa19.21■□□□□ 0.67
SOX2-OT-248ENST00000628496 DISP3Q9P2K9 1392 aa19.2■□□□□ 0.66
SOX2-OT-248ENST00000628496 ST20-MTHFSA0A0A6YYL1 179 aa19.2■□□□□ 0.66
SOX2-OT-248ENST00000628496 PSME1Q06323 249 aa19.19■□□□□ 0.66
SOX2-OT-248ENST00000628496 TESK2Q96S53 571 aa19.19■□□□□ 0.66
SOX2-OT-248ENST00000628496 ITSN1Q15811 1721 aa19.19■□□□□ 0.66
SOX2-OT-248ENST00000628496 SPATA31A3Q5VYP0 1347 aa19.19■□□□□ 0.66
SOX2-OT-248ENST00000628496 PPIP5K1Q6PFW1 1433 aa19.18■□□□□ 0.66
SOX2-OT-248ENST00000628496 PLEKHG3A1L390 1219 aa19.18■□□□□ 0.66
SOX2-OT-248ENST00000628496 NGDNQ8NEJ9 315 aaKnown RBP19.18■□□□□ 0.66
SOX2-OT-248ENST00000628496 SBNO1A3KN83 1393 aa19.18■□□□□ 0.66
SOX2-OT-248ENST00000628496 POLR3AO14802 1390 aaPredicted RBP19.18■□□□□ 0.66
SOX2-OT-248ENST00000628496 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
SOX2-OT-248ENST00000628496 NUTM2BA6NNL0 878 aaPredicted RBP19.16■□□□□ 0.66
SOX2-OT-248ENST00000628496 NUTM2EB1AL46 878 aaPredicted RBP19.16■□□□□ 0.66
SOX2-OT-248ENST00000628496 NUTM2AQ8IVF1 878 aaPredicted RBP19.16■□□□□ 0.66
SOX2-OT-248ENST00000628496 ACEP12821 1306 aa19.16■□□□□ 0.66
SOX2-OT-248ENST00000628496 COL22A1Q8NFW1 1626 aaPredicted RBP19.15■□□□□ 0.66
SOX2-OT-248ENST00000628496 CABP1Q9NZU7 370 aa19.14■□□□□ 0.65
SOX2-OT-248ENST00000628496 TRPM3Q9HCF6 1732 aaPredicted RBP19.14■□□□□ 0.65
SOX2-OT-248ENST00000628496 PIAS4Q8N2W9 510 aaPredicted RBP19.13■□□□□ 0.65
SOX2-OT-248ENST00000628496 ATAD2Q6PL18 1390 aa19.13■□□□□ 0.65
SOX2-OT-248ENST00000628496 ARHGEF10O15013 1369 aa19.1■□□□□ 0.65
SOX2-OT-248ENST00000628496 MEX3CQ5U5Q3 659 aaKnown RBP19.1■□□□□ 0.65
SOX2-OT-248ENST00000628496 RGS17Q9UGC6 210 aaPredicted RBP19.1■□□□□ 0.65
SOX2-OT-248ENST00000628496 PAK3O75914 559 aaPredicted RBP19.09■□□□□ 0.65
SOX2-OT-248ENST00000628496 LMOD2Q6P5Q4 547 aa19.09■□□□□ 0.65
SOX2-OT-248ENST00000628496 ALS2Q96Q42 1657 aa19.08■□□□□ 0.65
SOX2-OT-248ENST00000628496 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.64
SOX2-OT-248ENST00000628496 SLC24A1O60721 1099 aa19.07■□□□□ 0.64
SOX2-OT-248ENST00000628496 ADAMTS2O95450 1211 aa19.07■□□□□ 0.64
SOX2-OT-248ENST00000628496 USP6P35125 1406 aa19.07■□□□□ 0.64
SOX2-OT-248ENST00000628496 CABLES1Q8TDN4 633 aa19.06■□□□□ 0.64
SOX2-OT-248ENST00000628496 CPSF1Q10570 1443 aaKnown RBP19.06■□□□□ 0.64
SOX2-OT-248ENST00000628496 CD163L1Q9NR16 1453 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms