RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 NAIPQ13075 1403 aa16.18■□□□□ 0.18
TCF4-253ENST00000626466 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
TCF4-253ENST00000626466 COL22A1Q8NFW1 1626 aaPredicted RBP16.16■□□□□ 0.18
TCF4-253ENST00000626466 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
TCF4-253ENST00000626466 KIF1BO60333 1816 aa16.15■□□□□ 0.18
TCF4-253ENST00000626466 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
TCF4-253ENST00000626466 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
TCF4-253ENST00000626466 PXDNQ92626 1479 aa16.15■□□□□ 0.18
TCF4-253ENST00000626466 BCL9LQ86UU0 1499 aa16.14■□□□□ 0.17
TCF4-253ENST00000626466 CDC42BPGQ6DT37 1551 aa16.13■□□□□ 0.17
TCF4-253ENST00000626466 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
TCF4-253ENST00000626466 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
TCF4-253ENST00000626466 PPLO60437 1756 aa16.11■□□□□ 0.17
TCF4-253ENST00000626466 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
TCF4-253ENST00000626466 NUTM2FA1L443 756 aa16.1■□□□□ 0.17
TCF4-253ENST00000626466 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
TCF4-253ENST00000626466 FOXO3O43524 673 aa16.09■□□□□ 0.17
TCF4-253ENST00000626466 ADGRF5Q8IZF2 1346 aa16.09■□□□□ 0.17
TCF4-253ENST00000626466 PLEKHH1Q9ULM0 1364 aa16.09■□□□□ 0.17
TCF4-253ENST00000626466 WAPLQ7Z5K2 1190 aa16.08■□□□□ 0.16
TCF4-253ENST00000626466 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
TCF4-253ENST00000626466 RPGRIP1LQ68CZ1 1315 aa16.07■□□□□ 0.16
TCF4-253ENST00000626466 GLI3P10071 1580 aa16.07■□□□□ 0.16
TCF4-253ENST00000626466 MARF1Q9Y4F3 1742 aaKnown RBP16.06■□□□□ 0.16
TCF4-253ENST00000626466 STK26Q9P289 416 aa16.06■□□□□ 0.16
TCF4-253ENST00000626466 RALGAPBQ86X10 1494 aa16.05■□□□□ 0.16
TCF4-253ENST00000626466 TECPR2O15040 1411 aa16.05■□□□□ 0.16
TCF4-253ENST00000626466 GJD4Q96KN9 370 aaPredicted RBP16.05■□□□□ 0.16
TCF4-253ENST00000626466 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
TCF4-253ENST00000626466 ZRANB1Q9UGI0 708 aa16.04■□□□□ 0.16
TCF4-253ENST00000626466 SLIT2O94813 1529 aa16.04■□□□□ 0.16
TCF4-253ENST00000626466 LRPPRCP42704 1394 aaKnown RBP16.03■□□□□ 0.16
TCF4-253ENST00000626466 TMEM132EQ6IEE7 984 aa16.03■□□□□ 0.16
TCF4-253ENST00000626466 SPATA31E1Q6ZUB1 1445 aa16.02■□□□□ 0.16
TCF4-253ENST00000626466 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.02■□□□□ 0.15
TCF4-253ENST00000626466 SPATA31A3Q5VYP0 1347 aa16.01■□□□□ 0.15
TCF4-253ENST00000626466 FMN2Q9NZ56 1722 aa16.01■□□□□ 0.15
TCF4-253ENST00000626466 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
TCF4-253ENST00000626466 RGL3Q3MIN7 710 aa16■□□□□ 0.15
TCF4-253ENST00000626466 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
TCF4-253ENST00000626466 KNDC1Q76NI1 1749 aa15.99■□□□□ 0.15
TCF4-253ENST00000626466 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
TCF4-253ENST00000626466 PLEKHG5O94827 1062 aa15.99■□□□□ 0.15
TCF4-253ENST00000626466 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
TCF4-253ENST00000626466 ABCC11Q96J66 1382 aa15.99■□□□□ 0.15
TCF4-253ENST00000626466 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
TCF4-253ENST00000626466 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
TCF4-253ENST00000626466 SRCAPQ6ZRS2 3230 aa15.98■□□□□ 0.15
TCF4-253ENST00000626466 CABLES1Q8TDN4 633 aa15.98■□□□□ 0.15
TCF4-253ENST00000626466 EP400Q96L91 3159 aa15.98■□□□□ 0.15
TCF4-253ENST00000626466 CCDC144AA2RUR9 1427 aa15.97■□□□□ 0.15
TCF4-253ENST00000626466 BRWD3Q6RI45 1802 aa15.97■□□□□ 0.15
TCF4-253ENST00000626466 CCDC125Q86Z20 511 aa15.97■□□□□ 0.15
TCF4-253ENST00000626466 KIF1AQ12756 1690 aa15.97■□□□□ 0.15
TCF4-253ENST00000626466 YTHDC2Q9H6S0 1430 aaKnown RBP15.96■□□□□ 0.15
TCF4-253ENST00000626466 KRT28Q7Z3Y7 464 aa15.96■□□□□ 0.15
TCF4-253ENST00000626466 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
TCF4-253ENST00000626466 SEPT12Q8IYM1 358 aa15.95■□□□□ 0.14
TCF4-253ENST00000626466 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
TCF4-253ENST00000626466 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
TCF4-253ENST00000626466 PLCH1Q4KWH8 1693 aa15.94■□□□□ 0.14
TCF4-253ENST00000626466 VPS72Q15906 364 aa15.92■□□□□ 0.14
TCF4-253ENST00000626466 RGPD8O14715 1765 aaPredicted RBP15.92■□□□□ 0.14
TCF4-253ENST00000626466 SAFB2Q14151 953 aaKnown RBP eCLIP15.91■□□□□ 0.14
TCF4-253ENST00000626466 PHF8Q9UPP1 1060 aa15.91■□□□□ 0.14
TCF4-253ENST00000626466 NRXN1Q9ULB1 1477 aa15.91■□□□□ 0.14
TCF4-253ENST00000626466 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
TCF4-253ENST00000626466 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
TCF4-253ENST00000626466 CFAP70Q5T0N1 1121 aa15.89■□□□□ 0.13
TCF4-253ENST00000626466 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
TCF4-253ENST00000626466 SBNO1A3KN83 1393 aa15.88■□□□□ 0.13
TCF4-253ENST00000626466 FAM83GA6ND36 823 aa15.88■□□□□ 0.13
TCF4-253ENST00000626466 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
TCF4-253ENST00000626466 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
TCF4-253ENST00000626466 LMOD2Q6P5Q4 547 aa15.88■□□□□ 0.13
TCF4-253ENST00000626466 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
TCF4-253ENST00000626466 C14orf93Q9H972 538 aaKnown RBP15.88■□□□□ 0.13
TCF4-253ENST00000626466 NWD2Q9ULI1 1742 aa15.88■□□□□ 0.13
TCF4-253ENST00000626466 LRP5O75197 1615 aa15.87■□□□□ 0.13
TCF4-253ENST00000626466 PSDA5PKW4 1024 aaPredicted RBP15.87■□□□□ 0.13
TCF4-253ENST00000626466 ONECUT3O60422 494 aaPredicted RBP15.87■□□□□ 0.13
TCF4-253ENST00000626466 KRT27Q7Z3Y8 459 aa15.87■□□□□ 0.13
TCF4-253ENST00000626466 PMFBP1Q8TBY8 1022 aa15.87■□□□□ 0.13
TCF4-253ENST00000626466 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
TCF4-253ENST00000626466 NRAPQ86VF7 1730 aa15.87■□□□□ 0.13
TCF4-253ENST00000626466 SIRT1Q96EB6 747 aa15.86■□□□□ 0.13
TCF4-253ENST00000626466 SF3B2Q13435 895 aaKnown RBP15.85■□□□□ 0.13
TCF4-253ENST00000626466 ARHGEF10O15013 1369 aa15.85■□□□□ 0.13
TCF4-253ENST00000626466 TRPM3Q9HCF6 1732 aaPredicted RBP15.85■□□□□ 0.13
TCF4-253ENST00000626466 PSME1Q06323 249 aa15.84■□□□□ 0.13
TCF4-253ENST00000626466 FAM98CQ17RN3 349 aaKnown RBP15.84■□□□□ 0.13
TCF4-253ENST00000626466 FAM182BQ5T319 152 aa15.84■□□□□ 0.13
TCF4-253ENST00000626466 A0A0G2JS52 829 aa15.83■□□□□ 0.12
TCF4-253ENST00000626466 MYT1Q01538 1121 aa15.83■□□□□ 0.12
TCF4-253ENST00000626466 PRR36Q9H6K5 1346 aa15.83■□□□□ 0.12
TCF4-253ENST00000626466 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.12
TCF4-253ENST00000626466 ADGRB2O60241 1585 aa15.83■□□□□ 0.12
TCF4-253ENST00000626466 HIRIP3Q9BW71 556 aaPredicted RBP15.82■□□□□ 0.12
TCF4-253ENST00000626466 ANKARQ7Z5J8 1434 aa15.82■□□□□ 0.12
TCF4-253ENST00000626466 DLC1Q96QB1 1528 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms