RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 SPATA31E1Q6ZUB1 1445 aa16.58■□□□□ 0.25
SIRPA-204ENST00000622179 KIF16BQ96L93 1317 aa16.58■□□□□ 0.25
SIRPA-204ENST00000622179 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.25
SIRPA-204ENST00000622179 WDR63Q8IWG1 891 aa16.58■□□□□ 0.25
SIRPA-204ENST00000622179 KDM5BQ9UGL1 1544 aa16.58■□□□□ 0.24
SIRPA-204ENST00000622179 GNAI1P63096 354 aa16.58■□□□□ 0.24
SIRPA-204ENST00000622179 PDZRN3Q9UPQ7 1066 aa16.58■□□□□ 0.24
SIRPA-204ENST00000622179 C14orf93Q9H972 538 aaKnown RBP16.57■□□□□ 0.24
SIRPA-204ENST00000622179 NOB1Q9ULX3 412 aaKnown RBP16.57■□□□□ 0.24
SIRPA-204ENST00000622179 HMMRO75330 724 aa16.56■□□□□ 0.24
SIRPA-204ENST00000622179 UHRF1BP1Q6BDS2 1440 aa16.56■□□□□ 0.24
SIRPA-204ENST00000622179 KCNJ4P48050 445 aa16.56■□□□□ 0.24
SIRPA-204ENST00000622179 ARHGEF12Q9NZN5 1544 aa16.56■□□□□ 0.24
SIRPA-204ENST00000622179 TRIM6-TRIM34B2RNG4 842 aa16.55■□□□□ 0.24
SIRPA-204ENST00000622179 ASXL2Q76L83 1435 aa16.55■□□□□ 0.24
SIRPA-204ENST00000622179 A2MP01023 1474 aa16.55■□□□□ 0.24
SIRPA-204ENST00000622179 RRS1Q15050 365 aaKnown RBP16.54■□□□□ 0.24
SIRPA-204ENST00000622179 TMPOP42166 694 aaKnown RBP16.54■□□□□ 0.24
SIRPA-204ENST00000622179 C1orf115Q9H7X2 142 aa16.54■□□□□ 0.24
SIRPA-204ENST00000622179 API5Q9BZZ5 524 aaKnown RBP16.53■□□□□ 0.24
SIRPA-204ENST00000622179 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
SIRPA-204ENST00000622179 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
SIRPA-204ENST00000622179 CSB-PGBD3P0DP91 1061 aa16.52■□□□□ 0.24
SIRPA-204ENST00000622179 GSE1Q14687 1217 aa16.52■□□□□ 0.24
SIRPA-204ENST00000622179 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
SIRPA-204ENST00000622179 MCCP23508 829 aa16.52■□□□□ 0.24
SIRPA-204ENST00000622179 CFAP44Q96MT7 982 aa16.52■□□□□ 0.24
SIRPA-204ENST00000622179 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.23
SIRPA-204ENST00000622179 CARD14Q9BXL6 1004 aa16.52■□□□□ 0.23
SIRPA-204ENST00000622179 ATAD2Q6PL18 1390 aa16.51■□□□□ 0.23
SIRPA-204ENST00000622179 RTEL1-TNFRSF6BF6WH68 1400 aa16.51■□□□□ 0.23
SIRPA-204ENST00000622179 AAMPQ13685 434 aa16.51■□□□□ 0.23
SIRPA-204ENST00000622179 NOL8Q76FK4 1167 aaKnown RBP16.51■□□□□ 0.23
SIRPA-204ENST00000622179 GBP4Q96PP9 640 aa16.51■□□□□ 0.23
SIRPA-204ENST00000622179 FBLN1P23142 703 aa16.51■□□□□ 0.23
SIRPA-204ENST00000622179 ABCC10Q5T3U5 1492 aa16.51■□□□□ 0.23
SIRPA-204ENST00000622179 MBD5Q9P267 1494 aa16.5■□□□□ 0.23
SIRPA-204ENST00000622179 MVPQ14764 893 aaKnown RBP16.5■□□□□ 0.23
SIRPA-204ENST00000622179 L1TD1Q5T7N2 865 aaKnown RBP16.5■□□□□ 0.23
SIRPA-204ENST00000622179 SULT6B1Q6IMI4 303 aa16.5■□□□□ 0.23
SIRPA-204ENST00000622179 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
SIRPA-204ENST00000622179 C22orf23Q9BZE7 217 aa16.5■□□□□ 0.23
SIRPA-204ENST00000622179 ABCC2Q92887 1545 aa16.5■□□□□ 0.23
SIRPA-204ENST00000622179 EIF2S2P20042 333 aaKnown RBP16.5■□□□□ 0.23
SIRPA-204ENST00000622179 NLRP6P59044 892 aa16.5■□□□□ 0.23
SIRPA-204ENST00000622179 TSPYL4Q9UJ04 414 aa16.5■□□□□ 0.23
SIRPA-204ENST00000622179 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
SIRPA-204ENST00000622179 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
SIRPA-204ENST00000622179 NKTRP30414 1462 aaKnown RBP16.49■□□□□ 0.23
SIRPA-204ENST00000622179 FKBP5Q13451 457 aaPredicted RBP16.47■□□□□ 0.23
SIRPA-204ENST00000622179 PLEKHH1Q9ULM0 1364 aa16.47■□□□□ 0.23
SIRPA-204ENST00000622179 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
SIRPA-204ENST00000622179 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
SIRPA-204ENST00000622179 SSH1Q8WYL5 1049 aa16.46■□□□□ 0.23
SIRPA-204ENST00000622179 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.23
SIRPA-204ENST00000622179 TAOK2Q9UL54 1235 aa16.46■□□□□ 0.23
SIRPA-204ENST00000622179 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.23
SIRPA-204ENST00000622179 DENND4BO75064 1496 aaPredicted RBP16.46■□□□□ 0.23
SIRPA-204ENST00000622179 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.23
SIRPA-204ENST00000622179 FCHSD2O94868 740 aa16.46■□□□□ 0.22
SIRPA-204ENST00000622179 PTMAP06454 111 aaKnown RBP16.45■□□□□ 0.22
SIRPA-204ENST00000622179 NME9Q86XW9 330 aa16.45■□□□□ 0.22
SIRPA-204ENST00000622179 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
SIRPA-204ENST00000622179 FGD1P98174 961 aa16.45■□□□□ 0.22
SIRPA-204ENST00000622179 PLCB2Q00722 1185 aa16.45■□□□□ 0.22
SIRPA-204ENST00000622179 CCDC61Q9Y6R9 512 aa16.45■□□□□ 0.22
SIRPA-204ENST00000622179 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
SIRPA-204ENST00000622179 FRAT2O75474 233 aaPredicted RBP16.45■□□□□ 0.22
SIRPA-204ENST00000622179 TEFQ10587 303 aa16.45■□□□□ 0.22
SIRPA-204ENST00000622179 FOXD4L5Q5VV16 416 aaPredicted RBP16.45■□□□□ 0.22
SIRPA-204ENST00000622179 FOXD4L4Q8WXT5 416 aaPredicted RBP16.45■□□□□ 0.22
SIRPA-204ENST00000622179 PSME1Q06323 249 aa16.44■□□□□ 0.22
SIRPA-204ENST00000622179 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
SIRPA-204ENST00000622179 ZNF330Q9Y3S2 320 aaPredicted RBP16.44■□□□□ 0.22
SIRPA-204ENST00000622179 TMEM57Q8N5G2 664 aa16.44■□□□□ 0.22
SIRPA-204ENST00000622179 ABCA8O94911 1581 aa16.44■□□□□ 0.22
SIRPA-204ENST00000622179 GOLGA6L3A6NEY3 463 aa16.44■□□□□ 0.22
SIRPA-204ENST00000622179 IGHDP01880 384 aa16.43■□□□□ 0.22
SIRPA-204ENST00000622179 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
SIRPA-204ENST00000622179 NAP1L2Q9ULW6 460 aaPredicted RBP16.43■□□□□ 0.22
SIRPA-204ENST00000622179 ZNF692Q9BU19 519 aaPredicted RBP16.42■□□□□ 0.22
SIRPA-204ENST00000622179 ADGBQ8N7X0 1667 aa16.42■□□□□ 0.22
SIRPA-204ENST00000622179 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
SIRPA-204ENST00000622179 ABTB2Q8N961 1025 aa16.41■□□□□ 0.22
SIRPA-204ENST00000622179 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
SIRPA-204ENST00000622179 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
SIRPA-204ENST00000622179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
SIRPA-204ENST00000622179 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
SIRPA-204ENST00000622179 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
SIRPA-204ENST00000622179 ZNF518AQ6AHZ1 1483 aa16.41■□□□□ 0.22
SIRPA-204ENST00000622179 ST18O60284 1047 aa16.4■□□□□ 0.22
SIRPA-204ENST00000622179 FYB1O15117 783 aa16.4■□□□□ 0.22
SIRPA-204ENST00000622179 CHMP4AQ9BY43 222 aa16.4■□□□□ 0.22
SIRPA-204ENST00000622179 C1orf141Q5JVX7 400 aa16.39■□□□□ 0.21
SIRPA-204ENST00000622179 EIF2AK4Q9P2K8 1649 aaKnown RBP16.39■□□□□ 0.21
SIRPA-204ENST00000622179 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
SIRPA-204ENST00000622179 CHMP5Q9NZZ3 219 aa16.38■□□□□ 0.21
SIRPA-204ENST00000622179 TNNQ9UQP3 1299 aa16.38■□□□□ 0.21
SIRPA-204ENST00000622179 TRIM27P14373 513 aa16.38■□□□□ 0.21
SIRPA-204ENST00000622179 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms