RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 TRPM1Q7Z4N2 1603 aa26.47■■□□□ 1.83
CIRBP-245ENST00000621399 PIP4K2BP78356 416 aa26.46■■□□□ 1.83
CIRBP-245ENST00000621399 SAFB2Q14151 953 aaKnown RBP eCLIP26.46■■□□□ 1.83
CIRBP-245ENST00000621399 CADPS2Q86UW7 1296 aa26.46■■□□□ 1.83
CIRBP-245ENST00000621399 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
CIRBP-245ENST00000621399 CARD11Q9BXL7 1154 aa26.43■■□□□ 1.82
CIRBP-245ENST00000621399 RALGAPBQ86X10 1494 aa26.42■■□□□ 1.82
CIRBP-245ENST00000621399 DCCP43146 1447 aa26.41■■□□□ 1.82
CIRBP-245ENST00000621399 SLAIN2Q9P270 581 aa26.41■■□□□ 1.82
CIRBP-245ENST00000621399 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.4■■□□□ 1.82
CIRBP-245ENST00000621399 GPRASP1Q5JY77 1395 aa26.4■■□□□ 1.82
CIRBP-245ENST00000621399 NALCNQ8IZF0 1738 aa26.38■■□□□ 1.81
CIRBP-245ENST00000621399 MINK1Q8N4C8 1332 aaPredicted RBP26.37■■□□□ 1.81
CIRBP-245ENST00000621399 HIRIP3Q9BW71 556 aaPredicted RBP26.35■■□□□ 1.81
CIRBP-245ENST00000621399 CENPJQ9HC77 1338 aaPredicted RBP26.35■■□□□ 1.81
CIRBP-245ENST00000621399 ARHGEF28Q8N1W1 1705 aaKnown RBP26.34■■□□□ 1.81
CIRBP-245ENST00000621399 EIF3AQ14152 1382 aaKnown RBP26.33■■□□□ 1.8
CIRBP-245ENST00000621399 MST1RQ04912 1400 aa26.31■■□□□ 1.8
CIRBP-245ENST00000621399 CDC42BPGQ6DT37 1551 aa26.31■■□□□ 1.8
CIRBP-245ENST00000621399 SOCS7O14512 581 aa26.3■■□□□ 1.8
CIRBP-245ENST00000621399 NUTM2FA1L443 756 aa26.29■■□□□ 1.8
CIRBP-245ENST00000621399 WASLO00401 505 aaPredicted RBP26.27■■□□□ 1.8
CIRBP-245ENST00000621399 C1orf167Q5SNV9 1468 aa26.27■■□□□ 1.8
CIRBP-245ENST00000621399 BRINP3Q76B58 766 aa26.25■■□□□ 1.79
CIRBP-245ENST00000621399 ADGRB2O60241 1585 aa26.24■■□□□ 1.79
CIRBP-245ENST00000621399 ESCO1Q5FWF5 840 aa26.23■■□□□ 1.79
CIRBP-245ENST00000621399 ORAI2Q96SN7 254 aa26.23■■□□□ 1.79
CIRBP-245ENST00000621399 CDK19Q9BWU1 502 aa26.22■■□□□ 1.79
CIRBP-245ENST00000621399 ROBO1Q9Y6N7 1651 aa26.22■■□□□ 1.79
CIRBP-245ENST00000621399 HSPA1LP34931 641 aa26.2■■□□□ 1.78
CIRBP-245ENST00000621399 USP47Q96K76 1375 aa26.2■■□□□ 1.78
CIRBP-245ENST00000621399 ST20-MTHFSA0A0A6YYL1 179 aa26.19■■□□□ 1.78
CIRBP-245ENST00000621399 FMN2Q9NZ56 1722 aa26.19■■□□□ 1.78
CIRBP-245ENST00000621399 QRICH2Q9H0J4 1663 aa26.19■■□□□ 1.78
CIRBP-245ENST00000621399 ANKARQ7Z5J8 1434 aa26.17■■□□□ 1.78
CIRBP-245ENST00000621399 SRPK2P78362 688 aaKnown RBP26.17■■□□□ 1.78
CIRBP-245ENST00000621399 EVC2Q86UK5 1308 aa26.16■■□□□ 1.78
CIRBP-245ENST00000621399 NUDT16Q96DE0 195 aaKnown RBP26.15■■□□□ 1.78
CIRBP-245ENST00000621399 PRR36Q9H6K5 1346 aa26.14■■□□□ 1.78
CIRBP-245ENST00000621399 TULP4Q9NRJ4 1543 aa26.14■■□□□ 1.78
CIRBP-245ENST00000621399 CABP2Q9NPB3 220 aa26.14■■□□□ 1.78
CIRBP-245ENST00000621399 SBNO2Q9Y2G9 1366 aa26.14■■□□□ 1.78
CIRBP-245ENST00000621399 DDX17Q92841 729 aaKnown RBP26.12■■□□□ 1.77
CIRBP-245ENST00000621399 PHF8Q9UPP1 1060 aa26.12■■□□□ 1.77
CIRBP-245ENST00000621399 TESK2Q96S53 571 aa26.11■■□□□ 1.77
CIRBP-245ENST00000621399 FOXO3O43524 673 aa26.1■■□□□ 1.77
CIRBP-245ENST00000621399 SLC24A1O60721 1099 aa26.1■■□□□ 1.77
CIRBP-245ENST00000621399 EIF4G2P78344 907 aaKnown RBP eCLIP26.1■■□□□ 1.77
CIRBP-245ENST00000621399 PMFBP1Q8TBY8 1022 aa26.09■■□□□ 1.77
CIRBP-245ENST00000621399 CCDC61Q9Y6R9 512 aa26.09■■□□□ 1.77
CIRBP-245ENST00000621399 USP32Q8NFA0 1604 aa26.08■■□□□ 1.77
CIRBP-245ENST00000621399 ATP7BP35670 1465 aa26.08■■□□□ 1.77
CIRBP-245ENST00000621399 NPHP3Q7Z494 1330 aa26.07■■□□□ 1.76
CIRBP-245ENST00000621399 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
CIRBP-245ENST00000621399 HSPA5P11021 654 aaKnown RBP26.05■■□□□ 1.76
CIRBP-245ENST00000621399 TMF1P82094 1093 aa26.04■■□□□ 1.76
CIRBP-245ENST00000621399 XPCQ01831 940 aaPredicted RBP26.04■■□□□ 1.76
CIRBP-245ENST00000621399 PHLPP1O60346 1717 aa26.04■■□□□ 1.76
CIRBP-245ENST00000621399 RGPD8O14715 1765 aaPredicted RBP26.04■■□□□ 1.76
CIRBP-245ENST00000621399 PSME1Q06323 249 aa26.03■■□□□ 1.76
CIRBP-245ENST00000621399 NGDNQ8NEJ9 315 aaKnown RBP26.03■■□□□ 1.76
CIRBP-245ENST00000621399 KIF1AQ12756 1690 aa26.03■■□□□ 1.76
CIRBP-245ENST00000621399 SOS2Q07890 1332 aaPredicted RBP26.02■■□□□ 1.76
CIRBP-245ENST00000621399 NHSL1Q5SYE7 1610 aa26.02■■□□□ 1.76
CIRBP-245ENST00000621399 PLEKHG3A1L390 1219 aa26.01■■□□□ 1.75
CIRBP-245ENST00000621399 KRT28Q7Z3Y7 464 aa26.01■■□□□ 1.75
CIRBP-245ENST00000621399 LRRC59Q96AG4 307 aaKnown RBP26.01■■□□□ 1.75
CIRBP-245ENST00000621399 CABP1Q9NZU7 370 aa26.01■■□□□ 1.75
CIRBP-245ENST00000621399 PPIP5K1Q6PFW1 1433 aa26■■□□□ 1.75
CIRBP-245ENST00000621399 ATAD2Q6PL18 1390 aa26■■□□□ 1.75
CIRBP-245ENST00000621399 PUS7Q96PZ0 661 aaKnown RBP25.99■■□□□ 1.75
CIRBP-245ENST00000621399 COL16A1Q07092 1604 aaPredicted RBP25.99■■□□□ 1.75
CIRBP-245ENST00000621399 ACEP12821 1306 aa25.97■■□□□ 1.75
CIRBP-245ENST00000621399 ZEB1P37275 1124 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-245ENST00000621399 PXDNQ92626 1479 aa25.97■■□□□ 1.75
CIRBP-245ENST00000621399 ITSN1Q15811 1721 aa25.97■■□□□ 1.75
CIRBP-245ENST00000621399 CDCA8Q53HL2 280 aa25.96■■□□□ 1.75
CIRBP-245ENST00000621399 JCADQ9P266 1359 aa25.95■■□□□ 1.75
CIRBP-245ENST00000621399 TMC1Q8TDI8 760 aa25.95■■□□□ 1.74
CIRBP-245ENST00000621399 TOPAZ1Q8N9V7 1692 aa25.95■■□□□ 1.74
CIRBP-245ENST00000621399 POLR3AO14802 1390 aaPredicted RBP25.94■■□□□ 1.74
CIRBP-245ENST00000621399 SLC12A5Q9H2X9 1139 aa25.9■■□□□ 1.74
CIRBP-245ENST00000621399 SPATA31A3Q5VYP0 1347 aa25.89■■□□□ 1.74
CIRBP-245ENST00000621399 PAK3O75914 559 aaPredicted RBP25.89■■□□□ 1.74
CIRBP-245ENST00000621399 LMOD2Q6P5Q4 547 aa25.89■■□□□ 1.74
CIRBP-245ENST00000621399 SBNO1A3KN83 1393 aa25.89■■□□□ 1.74
CIRBP-245ENST00000621399 MED1Q15648 1581 aaPredicted RBP25.88■■□□□ 1.73
CIRBP-245ENST00000621399 PNPLA6Q8IY17 1366 aa25.87■■□□□ 1.73
CIRBP-245ENST00000621399 ZNF692Q9BU19 519 aaPredicted RBP25.87■■□□□ 1.73
CIRBP-245ENST00000621399 POLR3GLQ9BT43 218 aa25.86■■□□□ 1.73
CIRBP-245ENST00000621399 TNS3Q68CZ2 1445 aa25.86■■□□□ 1.73
CIRBP-245ENST00000621399 SPATA31A6Q5VVP1 1343 aa25.86■■□□□ 1.73
CIRBP-245ENST00000621399 NINLQ9Y2I6 1382 aa25.84■■□□□ 1.73
CIRBP-245ENST00000621399 HDGFL2Q7Z4V5 671 aaPredicted RBP25.84■■□□□ 1.73
CIRBP-245ENST00000621399 TERF2IPQ9NYB0 399 aa25.84■■□□□ 1.73
CIRBP-245ENST00000621399 USP6P35125 1406 aa25.82■■□□□ 1.72
CIRBP-245ENST00000621399 NUTM2BA6NNL0 878 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-245ENST00000621399 NUTM2EB1AL46 878 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-245ENST00000621399 NUTM2AQ8IVF1 878 aaPredicted RBP25.82■■□□□ 1.72
CIRBP-245ENST00000621399 ARHGEF10O15013 1369 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms