RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 HFM1A2PYH4 1435 aa23.64■■□□□ 1.37
SNHG28-203ENST00000621242 PPLO60437 1756 aa23.63■■□□□ 1.37
SNHG28-203ENST00000621242 ZRANB1Q9UGI0 708 aa23.63■■□□□ 1.37
SNHG28-203ENST00000621242 MYOM2P54296 1465 aa23.62■■□□□ 1.37
SNHG28-203ENST00000621242 ESCO1Q5FWF5 840 aa23.62■■□□□ 1.37
SNHG28-203ENST00000621242 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
SNHG28-203ENST00000621242 FOXD1Q16676 465 aa23.61■■□□□ 1.37
SNHG28-203ENST00000621242 RPGRIP1LQ68CZ1 1315 aa23.6■■□□□ 1.37
SNHG28-203ENST00000621242 NPHP3Q7Z494 1330 aa23.6■■□□□ 1.37
SNHG28-203ENST00000621242 PXDNQ92626 1479 aa23.6■■□□□ 1.37
SNHG28-203ENST00000621242 NAIPQ13075 1403 aa23.59■■□□□ 1.37
SNHG28-203ENST00000621242 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
SNHG28-203ENST00000621242 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
SNHG28-203ENST00000621242 FOXO3O43524 673 aa23.57■■□□□ 1.36
SNHG28-203ENST00000621242 CCDC125Q86Z20 511 aa23.57■■□□□ 1.36
SNHG28-203ENST00000621242 GJD4Q96KN9 370 aaPredicted RBP23.56■■□□□ 1.36
SNHG28-203ENST00000621242 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.53■■□□□ 1.36
SNHG28-203ENST00000621242 NUTM2FA1L443 756 aa23.53■■□□□ 1.36
SNHG28-203ENST00000621242 WAPLQ7Z5K2 1190 aa23.51■■□□□ 1.35
SNHG28-203ENST00000621242 SLC4A1APQ9BWU0 796 aaKnown RBP23.51■■□□□ 1.35
SNHG28-203ENST00000621242 LRPPRCP42704 1394 aaKnown RBP23.51■■□□□ 1.35
SNHG28-203ENST00000621242 BRWD3Q6RI45 1802 aa23.5■■□□□ 1.35
SNHG28-203ENST00000621242 STK26Q9P289 416 aa23.5■■□□□ 1.35
SNHG28-203ENST00000621242 RRBP1Q9P2E9 1410 aaKnown RBP23.5■■□□□ 1.35
SNHG28-203ENST00000621242 GLI3P10071 1580 aa23.49■■□□□ 1.35
SNHG28-203ENST00000621242 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
SNHG28-203ENST00000621242 UNC5CLQ8IV45 518 aa23.48■■□□□ 1.35
SNHG28-203ENST00000621242 RALGAPBQ86X10 1494 aa23.47■■□□□ 1.35
SNHG28-203ENST00000621242 SLIT2O94813 1529 aa23.47■■□□□ 1.35
SNHG28-203ENST00000621242 FMN2Q9NZ56 1722 aa23.46■■□□□ 1.35
SNHG28-203ENST00000621242 TECPR2O15040 1411 aa23.45■■□□□ 1.34
SNHG28-203ENST00000621242 SPATA31A3Q5VYP0 1347 aa23.45■■□□□ 1.34
SNHG28-203ENST00000621242 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
SNHG28-203ENST00000621242 PLEKHH1Q9ULM0 1364 aa23.44■■□□□ 1.34
SNHG28-203ENST00000621242 KNDC1Q76NI1 1749 aa23.44■■□□□ 1.34
SNHG28-203ENST00000621242 RGPD8O14715 1765 aaPredicted RBP23.43■■□□□ 1.34
SNHG28-203ENST00000621242 IFT172Q9UG01 1749 aa23.43■■□□□ 1.34
SNHG28-203ENST00000621242 RGL3Q3MIN7 710 aa23.43■■□□□ 1.34
SNHG28-203ENST00000621242 TMEM132EQ6IEE7 984 aa23.43■■□□□ 1.34
SNHG28-203ENST00000621242 KIF1AQ12756 1690 aa23.43■■□□□ 1.34
SNHG28-203ENST00000621242 USP32Q8NFA0 1604 aa23.43■■□□□ 1.34
SNHG28-203ENST00000621242 DEFB132Q7Z7B7 95 aa23.42■■□□□ 1.34
SNHG28-203ENST00000621242 ABCC11Q96J66 1382 aa23.41■■□□□ 1.34
SNHG28-203ENST00000621242 KRT28Q7Z3Y7 464 aa23.41■■□□□ 1.34
SNHG28-203ENST00000621242 CCDC144AA2RUR9 1427 aa23.4■■□□□ 1.34
SNHG28-203ENST00000621242 SEPT12Q8IYM1 358 aa23.38■■□□□ 1.33
SNHG28-203ENST00000621242 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
SNHG28-203ENST00000621242 HAP1P54257 671 aaPredicted RBP23.37■■□□□ 1.33
SNHG28-203ENST00000621242 PLCH1Q4KWH8 1693 aa23.37■■□□□ 1.33
SNHG28-203ENST00000621242 ANKRD30BQ9BXX2 1392 aa23.37■■□□□ 1.33
SNHG28-203ENST00000621242 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
SNHG28-203ENST00000621242 SF3B2Q13435 895 aaKnown RBP23.36■■□□□ 1.33
SNHG28-203ENST00000621242 CABLES1Q8TDN4 633 aa23.36■■□□□ 1.33
SNHG28-203ENST00000621242 YTHDC2Q9H6S0 1430 aaKnown RBP23.35■■□□□ 1.33
SNHG28-203ENST00000621242 VPS72Q15906 364 aa23.35■■□□□ 1.33
SNHG28-203ENST00000621242 NWD2Q9ULI1 1742 aa23.35■■□□□ 1.33
SNHG28-203ENST00000621242 TNS3Q68CZ2 1445 aa23.34■■□□□ 1.33
SNHG28-203ENST00000621242 PHF8Q9UPP1 1060 aa23.34■■□□□ 1.33
SNHG28-203ENST00000621242 PIK3C2GO75747 1445 aa23.33■■□□□ 1.33
SNHG28-203ENST00000621242 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
SNHG28-203ENST00000621242 ABCA3Q99758 1704 aa23.33■■□□□ 1.32
SNHG28-203ENST00000621242 PSME1Q06323 249 aa23.32■■□□□ 1.32
SNHG28-203ENST00000621242 ONECUT3O60422 494 aaPredicted RBP23.31■■□□□ 1.32
SNHG28-203ENST00000621242 LMOD2Q6P5Q4 547 aa23.3■■□□□ 1.32
SNHG28-203ENST00000621242 KRT27Q7Z3Y8 459 aa23.3■■□□□ 1.32
SNHG28-203ENST00000621242 SIRT1Q96EB6 747 aa23.3■■□□□ 1.32
SNHG28-203ENST00000621242 LRP5O75197 1615 aa23.29■■□□□ 1.32
SNHG28-203ENST00000621242 MPHOSPH9Q99550 1183 aa23.27■■□□□ 1.32
SNHG28-203ENST00000621242 NRXN1Q9ULB1 1477 aa23.27■■□□□ 1.32
SNHG28-203ENST00000621242 SBNO1A3KN83 1393 aa23.27■■□□□ 1.31
SNHG28-203ENST00000621242 FAM83GA6ND36 823 aa23.25■■□□□ 1.31
SNHG28-203ENST00000621242 C14orf93Q9H972 538 aaKnown RBP23.25■■□□□ 1.31
SNHG28-203ENST00000621242 ARHGEF10O15013 1369 aa23.25■■□□□ 1.31
SNHG28-203ENST00000621242 A0A0G2JS52 829 aa23.24■■□□□ 1.31
SNHG28-203ENST00000621242 PSDA5PKW4 1024 aaPredicted RBP23.24■■□□□ 1.31
SNHG28-203ENST00000621242 MYT1Q01538 1121 aa23.24■■□□□ 1.31
SNHG28-203ENST00000621242 SAFB2Q14151 953 aaKnown RBP eCLIP23.24■■□□□ 1.31
SNHG28-203ENST00000621242 NRAPQ86VF7 1730 aa23.23■■□□□ 1.31
SNHG28-203ENST00000621242 CFAP70Q5T0N1 1121 aa23.23■■□□□ 1.31
SNHG28-203ENST00000621242 PMFBP1Q8TBY8 1022 aa23.23■■□□□ 1.31
SNHG28-203ENST00000621242 DHX57Q6P158 1386 aaKnown RBP23.23■■□□□ 1.31
SNHG28-203ENST00000621242 BAG6P46379 1132 aa23.22■■□□□ 1.31
SNHG28-203ENST00000621242 PRAM1Q96QH2 718 aa23.22■■□□□ 1.31
SNHG28-203ENST00000621242 FAM98CQ17RN3 349 aaKnown RBP23.21■■□□□ 1.31
SNHG28-203ENST00000621242 BTG4Q9NY30 223 aa23.19■■□□□ 1.3
SNHG28-203ENST00000621242 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
SNHG28-203ENST00000621242 HRCP23327 699 aa23.18■■□□□ 1.3
SNHG28-203ENST00000621242 RGPD1P0DJD0 1748 aa23.17■■□□□ 1.3
SNHG28-203ENST00000621242 COL14A1Q05707 1796 aaKnown RBP23.17■■□□□ 1.3
SNHG28-203ENST00000621242 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
SNHG28-203ENST00000621242 POGKQ9P215 609 aa23.16■■□□□ 1.3
SNHG28-203ENST00000621242 ANKARQ7Z5J8 1434 aa23.16■■□□□ 1.3
SNHG28-203ENST00000621242 ALS2Q96Q42 1657 aa23.16■■□□□ 1.3
SNHG28-203ENST00000621242 FAM182BQ5T319 152 aa23.15■■□□□ 1.3
SNHG28-203ENST00000621242 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
SNHG28-203ENST00000621242 ADGRB2O60241 1585 aa23.13■■□□□ 1.29
SNHG28-203ENST00000621242 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
SNHG28-203ENST00000621242 SPATA31A5Q5VU36 1347 aa23.1■■□□□ 1.29
SNHG28-203ENST00000621242 SPATA31A7Q8IWB4 1347 aa23.1■■□□□ 1.29
SNHG28-203ENST00000621242 GPRASP1Q5JY77 1395 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms