RNA–Protein interactions for RNA: ENST00000619172.4

LINC01660-204, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 5 BASIC

Gene LINC01660, Length 3,572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-204ENST00000619172 SSH1Q8WYL5 1049 aa11.86□□□□□ -0.51
LINC01660-204ENST00000619172 KDM2BQ8NHM5 1336 aa11.86□□□□□ -0.51
LINC01660-204ENST00000619172 A2MP01023 1474 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 TRAK2O60296 914 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
LINC01660-204ENST00000619172 RAPGEF3O95398 923 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 PDE4CQ08493 712 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 HDGFL2Q7Z4V5 671 aaPredicted RBP11.85□□□□□ -0.51
LINC01660-204ENST00000619172 TMEM57Q8N5G2 664 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 SYCP2Q9BX26 1530 aa11.85□□□□□ -0.51
LINC01660-204ENST00000619172 MVPQ14764 893 aaKnown RBP11.84□□□□□ -0.51
LINC01660-204ENST00000619172 PRKAR2BP31323 418 aa11.84□□□□□ -0.51
LINC01660-204ENST00000619172 DDX19BQ9UMR2 479 aa11.84□□□□□ -0.51
LINC01660-204ENST00000619172 KDM5CP41229 1560 aa11.83□□□□□ -0.51
LINC01660-204ENST00000619172 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
LINC01660-204ENST00000619172 ZNF428Q96B54 188 aa11.83□□□□□ -0.52
LINC01660-204ENST00000619172 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
LINC01660-204ENST00000619172 TRIM27P14373 513 aa11.82□□□□□ -0.52
LINC01660-204ENST00000619172 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
LINC01660-204ENST00000619172 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
LINC01660-204ENST00000619172 DDX49Q9Y6V7 483 aaKnown RBP11.82□□□□□ -0.52
LINC01660-204ENST00000619172 UHRF1BP1Q6BDS2 1440 aa11.82□□□□□ -0.52
LINC01660-204ENST00000619172 PRAM1Q96QH2 718 aa11.82□□□□□ -0.52
LINC01660-204ENST00000619172 MPNDQ8N594 471 aa11.82□□□□□ -0.52
LINC01660-204ENST00000619172 CABP1Q9NZU7 370 aa11.81□□□□□ -0.52
LINC01660-204ENST00000619172 ATF7IPQ6VMQ6 1270 aa11.81□□□□□ -0.52
LINC01660-204ENST00000619172 GBP4Q96PP9 640 aa11.81□□□□□ -0.52
LINC01660-204ENST00000619172 CFAP65Q6ZU64 1925 aaKnown RBP11.81□□□□□ -0.52
LINC01660-204ENST00000619172 PTMAP06454 111 aaKnown RBP11.8□□□□□ -0.52
LINC01660-204ENST00000619172 MCM4P33991 863 aa11.8□□□□□ -0.52
LINC01660-204ENST00000619172 MAGI2Q86UL8 1455 aa11.8□□□□□ -0.52
LINC01660-204ENST00000619172 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
LINC01660-204ENST00000619172 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
LINC01660-204ENST00000619172 TMPOP42166 694 aaKnown RBP11.79□□□□□ -0.52
LINC01660-204ENST00000619172 DHX37Q8IY37 1157 aaKnown RBP11.79□□□□□ -0.52
LINC01660-204ENST00000619172 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
LINC01660-204ENST00000619172 TRAPPC8Q9Y2L5 1435 aa11.79□□□□□ -0.52
LINC01660-204ENST00000619172 DNTTIP2Q5QJE6 756 aaKnown RBP11.79□□□□□ -0.52
LINC01660-204ENST00000619172 LTV1Q96GA3 475 aaPredicted RBP11.79□□□□□ -0.52
LINC01660-204ENST00000619172 TARBP1Q13395 1621 aaKnown RBP11.79□□□□□ -0.52
LINC01660-204ENST00000619172 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
LINC01660-204ENST00000619172 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
LINC01660-204ENST00000619172 GPRASP1Q5JY77 1395 aa11.78□□□□□ -0.52
LINC01660-204ENST00000619172 TRIM6-TRIM34B2RNG4 842 aa11.78□□□□□ -0.52
LINC01660-204ENST00000619172 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.53
LINC01660-204ENST00000619172 MCTP1Q6DN14 999 aa11.77□□□□□ -0.53
LINC01660-204ENST00000619172 WAPLQ7Z5K2 1190 aa11.77□□□□□ -0.53
LINC01660-204ENST00000619172 TBC1D32Q96NH3 1257 aa11.77□□□□□ -0.53
LINC01660-204ENST00000619172 MBD5Q9P267 1494 aa11.77□□□□□ -0.53
LINC01660-204ENST00000619172 MIS18AQ9NYP9 233 aa11.77□□□□□ -0.53
LINC01660-204ENST00000619172 SCAF11Q99590 1463 aaKnown RBP11.76□□□□□ -0.53
LINC01660-204ENST00000619172 FAM83GA6ND36 823 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 MSNP26038 577 aaKnown RBP11.76□□□□□ -0.53
LINC01660-204ENST00000619172 CASC1Q6TDU7 716 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 WDR63Q8IWG1 891 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 RNF214Q8ND24 703 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 RILPL2Q969X0 211 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 RSPH6AQ9H0K4 717 aa11.76□□□□□ -0.53
LINC01660-204ENST00000619172 NOS1P29475 1434 aa11.75□□□□□ -0.53
LINC01660-204ENST00000619172 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
LINC01660-204ENST00000619172 XRCC6P12956 609 aaKnown RBP eCLIP11.75□□□□□ -0.53
LINC01660-204ENST00000619172 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
LINC01660-204ENST00000619172 ITSN2Q9NZM3 1697 aa11.74□□□□□ -0.53
LINC01660-204ENST00000619172 ADGRL2O95490 1459 aa11.74□□□□□ -0.53
LINC01660-204ENST00000619172 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
LINC01660-204ENST00000619172 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
LINC01660-204ENST00000619172 BLMP54132 1417 aaPredicted RBP11.74□□□□□ -0.53
LINC01660-204ENST00000619172 SMARCA5O60264 1052 aaPredicted RBP11.74□□□□□ -0.53
LINC01660-204ENST00000619172 CHD1LQ86WJ1 897 aa11.74□□□□□ -0.53
LINC01660-204ENST00000619172 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
LINC01660-204ENST00000619172 EMILIN1Q9Y6C2 1016 aa11.73□□□□□ -0.53
LINC01660-204ENST00000619172 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
LINC01660-204ENST00000619172 ASXL1Q8IXJ9 1541 aa11.73□□□□□ -0.53
LINC01660-204ENST00000619172 CAVIN1Q6NZI2 390 aaKnown RBP11.73□□□□□ -0.53
LINC01660-204ENST00000619172 HSP90AA2PQ14568 343 aaPredicted RBP11.73□□□□□ -0.53
LINC01660-204ENST00000619172 FAM43AQ8N2R8 423 aa11.73□□□□□ -0.53
LINC01660-204ENST00000619172 CDK19Q9BWU1 502 aa11.73□□□□□ -0.53
LINC01660-204ENST00000619172 RRAGDQ9NQL2 400 aaPredicted RBP11.73□□□□□ -0.53
LINC01660-204ENST00000619172 ZMYM4Q5VZL5 1548 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 KIF16BQ96L93 1317 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
LINC01660-204ENST00000619172 TSHZ3Q63HK5 1081 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 FBXO31Q5XUX0 539 aaPredicted RBP11.72□□□□□ -0.53
LINC01660-204ENST00000619172 ZNF521Q96K83 1311 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 TXNDC2Q86VQ3 553 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 NGEFQ8N5V2 710 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 TSPYL6Q8N831 410 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 GRPEL1Q9HAV7 217 aa11.72□□□□□ -0.53
LINC01660-204ENST00000619172 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
LINC01660-204ENST00000619172 IDI1Q13907 227 aa11.71□□□□□ -0.53
LINC01660-204ENST00000619172 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
LINC01660-204ENST00000619172 RTF1Q92541 710 aaKnown RBP11.71□□□□□ -0.53
LINC01660-204ENST00000619172 ZRANB1Q9UGI0 708 aa11.71□□□□□ -0.53
LINC01660-204ENST00000619172 CEP170Q5SW79 1584 aa11.71□□□□□ -0.53
LINC01660-204ENST00000619172 TNPO1Q92973 898 aaKnown RBP11.71□□□□□ -0.54
LINC01660-204ENST00000619172 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 403.9 ms