RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 STK26Q9P289 416 aa32.09■■■□□ 2.73
TRAF4-217ENST00000618771 DDX17Q92841 729 aaKnown RBP32.08■■■□□ 2.73
TRAF4-217ENST00000618771 UPF1Q92900 1129 aaKnown RBP eCLIP32.08■■■□□ 2.73
TRAF4-217ENST00000618771 LRRC59Q96AG4 307 aaKnown RBP32.08■■■□□ 2.73
TRAF4-217ENST00000618771 C1orf167Q5SNV9 1468 aa32.07■■■□□ 2.72
TRAF4-217ENST00000618771 ABCC11Q96J66 1382 aa32.07■■■□□ 2.72
TRAF4-217ENST00000618771 AFF2P51816 1311 aa32.06■■■□□ 2.72
TRAF4-217ENST00000618771 C14orf93Q9H972 538 aaKnown RBP32.06■■■□□ 2.72
TRAF4-217ENST00000618771 YTHDC2Q9H6S0 1430 aaKnown RBP32.06■■■□□ 2.72
TRAF4-217ENST00000618771 CDC42BPGQ6DT37 1551 aa32.06■■■□□ 2.72
TRAF4-217ENST00000618771 CFAP70Q5T0N1 1121 aa32.01■■■□□ 2.71
TRAF4-217ENST00000618771 WAPLQ7Z5K2 1190 aa32■■■□□ 2.71
TRAF4-217ENST00000618771 PNPLA6Q8IY17 1366 aa31.99■■■□□ 2.71
TRAF4-217ENST00000618771 C8orf37Q96NL8 207 aa31.99■■■□□ 2.71
TRAF4-217ENST00000618771 PLEKHH1Q9ULM0 1364 aa31.98■■■□□ 2.71
TRAF4-217ENST00000618771 CDK12Q9NYV4 1490 aaPredicted RBP31.97■■■□□ 2.71
TRAF4-217ENST00000618771 DHX57Q6P158 1386 aaKnown RBP31.97■■■□□ 2.71
TRAF4-217ENST00000618771 DCAF11Q8TEB1 546 aa31.95■■■□□ 2.71
TRAF4-217ENST00000618771 KDM2AQ9Y2K7 1162 aa31.95■■■□□ 2.71
TRAF4-217ENST00000618771 ORAI2Q96SN7 254 aa31.94■■■□□ 2.7
TRAF4-217ENST00000618771 QTRT2Q9H974 415 aaKnown RBP31.93■■■□□ 2.7
TRAF4-217ENST00000618771 FMN2Q9NZ56 1722 aa31.92■■■□□ 2.7
TRAF4-217ENST00000618771 SIRT1Q96EB6 747 aa31.92■■■□□ 2.7
TRAF4-217ENST00000618771 ADGRB1O14514 1584 aa31.92■■■□□ 2.7
TRAF4-217ENST00000618771 STAC3Q96MF2 364 aa31.91■■■□□ 2.7
TRAF4-217ENST00000618771 ADAMTS2O95450 1211 aa31.89■■■□□ 2.7
TRAF4-217ENST00000618771 DLC1Q96QB1 1528 aa31.89■■■□□ 2.7
TRAF4-217ENST00000618771 RBM6P78332 1123 aaKnown RBP31.88■■■□□ 2.69
TRAF4-217ENST00000618771 NGLY1Q96IV0 654 aa31.88■■■□□ 2.69
TRAF4-217ENST00000618771 RGS12O14924 1447 aa31.85■■■□□ 2.69
TRAF4-217ENST00000618771 ESCO1Q5FWF5 840 aa31.85■■■□□ 2.69
TRAF4-217ENST00000618771 SOS2Q07890 1332 aaPredicted RBP31.84■■■□□ 2.69
TRAF4-217ENST00000618771 RGPD8O14715 1765 aaPredicted RBP31.84■■■□□ 2.69
TRAF4-217ENST00000618771 PRAM1Q96QH2 718 aa31.83■■■□□ 2.69
TRAF4-217ENST00000618771 NUTM2FA1L443 756 aa31.82■■■□□ 2.68
TRAF4-217ENST00000618771 KIF1AQ12756 1690 aa31.8■■■□□ 2.68
TRAF4-217ENST00000618771 NPHP3Q7Z494 1330 aa31.79■■■□□ 2.68
TRAF4-217ENST00000618771 SAFB2Q14151 953 aaKnown RBP eCLIP31.79■■■□□ 2.68
TRAF4-217ENST00000618771 POGKQ9P215 609 aa31.79■■■□□ 2.68
TRAF4-217ENST00000618771 TRAK1Q9UPV9 953 aa31.77■■■□□ 2.68
TRAF4-217ENST00000618771 ADGRB2O60241 1585 aa31.77■■■□□ 2.68
TRAF4-217ENST00000618771 KIAA1210Q9ULL0 1709 aa31.76■■■□□ 2.67
TRAF4-217ENST00000618771 USP21Q9UK80 565 aa31.76■■■□□ 2.67
TRAF4-217ENST00000618771 PXDNQ92626 1479 aa31.76■■■□□ 2.67
TRAF4-217ENST00000618771 ARHGEF28Q8N1W1 1705 aaKnown RBP31.75■■■□□ 2.67
TRAF4-217ENST00000618771 FOXO3O43524 673 aa31.74■■■□□ 2.67
TRAF4-217ENST00000618771 COL22A1Q8NFW1 1626 aaPredicted RBP31.73■■■□□ 2.67
TRAF4-217ENST00000618771 XPCQ01831 940 aaPredicted RBP31.7■■■□□ 2.67
TRAF4-217ENST00000618771 TRPC5Q9UL62 973 aaPredicted RBP31.7■■■□□ 2.67
TRAF4-217ENST00000618771 USP32Q8NFA0 1604 aa31.69■■■□□ 2.66
TRAF4-217ENST00000618771 FNBP4Q8N3X1 1017 aaPredicted RBP31.69■■■□□ 2.66
TRAF4-217ENST00000618771 ANKARQ7Z5J8 1434 aa31.66■■■□□ 2.66
TRAF4-217ENST00000618771 MINK1Q8N4C8 1332 aaPredicted RBP31.65■■■□□ 2.66
TRAF4-217ENST00000618771 HIRIP3Q9BW71 556 aaPredicted RBP31.64■■■□□ 2.66
TRAF4-217ENST00000618771 PHF8Q9UPP1 1060 aa31.64■■■□□ 2.66
TRAF4-217ENST00000618771 ATAD2Q6PL18 1390 aa31.64■■■□□ 2.66
TRAF4-217ENST00000618771 ATRNO75882 1429 aa31.63■■■□□ 2.65
TRAF4-217ENST00000618771 MARF1Q9Y4F3 1742 aaKnown RBP31.61■■■□□ 2.65
TRAF4-217ENST00000618771 EIF3AQ14152 1382 aaKnown RBP31.6■■■□□ 2.65
TRAF4-217ENST00000618771 SIN3AQ96ST3 1273 aa31.6■■■□□ 2.65
TRAF4-217ENST00000618771 TULP4Q9NRJ4 1543 aa31.59■■■□□ 2.65
TRAF4-217ENST00000618771 KRT28Q7Z3Y7 464 aa31.58■■■□□ 2.65
TRAF4-217ENST00000618771 L3MBTL2Q969R5 705 aa31.57■■■□□ 2.64
TRAF4-217ENST00000618771 SPATA31A3Q5VYP0 1347 aa31.56■■■□□ 2.64
TRAF4-217ENST00000618771 WASLO00401 505 aaPredicted RBP31.56■■■□□ 2.64
TRAF4-217ENST00000618771 NBPF1Q3BBV0 1214 aa31.56■■■□□ 2.64
TRAF4-217ENST00000618771 BCL9LQ86UU0 1499 aa31.55■■■□□ 2.64
TRAF4-217ENST00000618771 ITSN1Q15811 1721 aa31.55■■■□□ 2.64
TRAF4-217ENST00000618771 TRIM26Q12899 539 aaPredicted RBP31.54■■■□□ 2.64
TRAF4-217ENST00000618771 NEUROD1Q13562 356 aa31.54■■■□□ 2.64
TRAF4-217ENST00000618771 PRR36Q9H6K5 1346 aa31.53■■■□□ 2.64
TRAF4-217ENST00000618771 PSME1Q06323 249 aa31.53■■■□□ 2.64
TRAF4-217ENST00000618771 TNS3Q68CZ2 1445 aa31.52■■■□□ 2.64
TRAF4-217ENST00000618771 PMFBP1Q8TBY8 1022 aa31.52■■■□□ 2.64
TRAF4-217ENST00000618771 SRCAPQ6ZRS2 3230 aa31.51■■■□□ 2.64
TRAF4-217ENST00000618771 EP400Q96L91 3159 aa31.51■■■□□ 2.64
TRAF4-217ENST00000618771 TRPM1Q7Z4N2 1603 aa31.5■■■□□ 2.63
TRAF4-217ENST00000618771 SBNO1A3KN83 1393 aa31.49■■■□□ 2.63
TRAF4-217ENST00000618771 GJD4Q96KN9 370 aaPredicted RBP31.49■■■□□ 2.63
TRAF4-217ENST00000618771 TRPM3Q9HCF6 1732 aaPredicted RBP31.49■■■□□ 2.63
TRAF4-217ENST00000618771 ATP7BP35670 1465 aa31.47■■■□□ 2.63
TRAF4-217ENST00000618771 ABCA3Q99758 1704 aa31.45■■■□□ 2.63
TRAF4-217ENST00000618771 QRICH2Q9H0J4 1663 aa31.44■■■□□ 2.62
TRAF4-217ENST00000618771 UNC5CLQ8IV45 518 aa31.43■■■□□ 2.62
TRAF4-217ENST00000618771 TOPAZ1Q8N9V7 1692 aa31.43■■■□□ 2.62
TRAF4-217ENST00000618771 ARHGEF10O15013 1369 aa31.43■■■□□ 2.62
TRAF4-217ENST00000618771 GPRASP1Q5JY77 1395 aa31.43■■■□□ 2.62
TRAF4-217ENST00000618771 ALS2Q96Q42 1657 aa31.41■■■□□ 2.62
TRAF4-217ENST00000618771 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.41■■■□□ 2.62
TRAF4-217ENST00000618771 LMOD2Q6P5Q4 547 aa31.41■■■□□ 2.62
TRAF4-217ENST00000618771 NUDT16Q96DE0 195 aaKnown RBP31.41■■■□□ 2.62
TRAF4-217ENST00000618771 CDK19Q9BWU1 502 aa31.41■■■□□ 2.62
TRAF4-217ENST00000618771 CCDC125Q86Z20 511 aa31.4■■■□□ 2.62
TRAF4-217ENST00000618771 ZRANB1Q9UGI0 708 aa31.4■■■□□ 2.62
TRAF4-217ENST00000618771 CENPJQ9HC77 1338 aaPredicted RBP31.4■■■□□ 2.62
TRAF4-217ENST00000618771 NGDNQ8NEJ9 315 aaKnown RBP31.39■■■□□ 2.62
TRAF4-217ENST00000618771 SLIT2O94813 1529 aa31.39■■■□□ 2.61
TRAF4-217ENST00000618771 RALGAPBQ86X10 1494 aa31.38■■■□□ 2.61
TRAF4-217ENST00000618771 HAP1P54257 671 aaPredicted RBP31.37■■■□□ 2.61
TRAF4-217ENST00000618771 GLI3P10071 1580 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms