RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 SAFB2Q14151 953 aaKnown RBP eCLIP21.44■■□□□ 1.02
UPK1A-204ENST00000617999 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
UPK1A-204ENST00000617999 ZNF335Q9H4Z2 1342 aaPredicted RBP21.43■■□□□ 1.02
UPK1A-204ENST00000617999 TOPAZ1Q8N9V7 1692 aa21.42■■□□□ 1.02
UPK1A-204ENST00000617999 LTBP4Q8N2S1 1624 aa21.41■■□□□ 1.02
UPK1A-204ENST00000617999 USP32Q8NFA0 1604 aa21.41■■□□□ 1.02
UPK1A-204ENST00000617999 ADGRL3Q9HAR2 1447 aa21.41■■□□□ 1.02
UPK1A-204ENST00000617999 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
UPK1A-204ENST00000617999 SIRT1Q96EB6 747 aa21.41■■□□□ 1.02
UPK1A-204ENST00000617999 POGKQ9P215 609 aa21.41■■□□□ 1.02
UPK1A-204ENST00000617999 CCDC7Q96M83 1385 aa21.4■■□□□ 1.02
UPK1A-204ENST00000617999 MINK1Q8N4C8 1332 aaPredicted RBP21.4■■□□□ 1.02
UPK1A-204ENST00000617999 C11orf95C9JLR9 678 aaPredicted RBP21.4■■□□□ 1.02
UPK1A-204ENST00000617999 LRRC7Q96NW7 1537 aa21.39■■□□□ 1.02
UPK1A-204ENST00000617999 KIF7Q2M1P5 1343 aa21.38■■□□□ 1.01
UPK1A-204ENST00000617999 DMRT2Q9Y5R5 561 aa21.38■■□□□ 1.01
UPK1A-204ENST00000617999 ITSN1Q15811 1721 aa21.38■■□□□ 1.01
UPK1A-204ENST00000617999 WASHC2AQ641Q2 1341 aa21.37■■□□□ 1.01
UPK1A-204ENST00000617999 RGPD8O14715 1765 aaPredicted RBP21.37■■□□□ 1.01
UPK1A-204ENST00000617999 ATP7BP35670 1465 aa21.36■■□□□ 1.01
UPK1A-204ENST00000617999 TMEM94Q12767 1356 aa21.36■■□□□ 1.01
UPK1A-204ENST00000617999 TMF1P82094 1093 aa21.34■■□□□ 1.01
UPK1A-204ENST00000617999 RBM33Q96EV2 1170 aaKnown RBP21.34■■□□□ 1.01
UPK1A-204ENST00000617999 EVC2Q86UK5 1308 aa21.3■■□□□ 1
UPK1A-204ENST00000617999 PROSER2Q86WR7 435 aaPredicted RBP21.29■■□□□ 1
UPK1A-204ENST00000617999 DCCP43146 1447 aa21.29■■□□□ 1
UPK1A-204ENST00000617999 NCOA3Q9Y6Q9 1424 aa21.29■■□□□ 1
UPK1A-204ENST00000617999 AKAP12Q02952 1782 aa21.28■■□□□ 1
UPK1A-204ENST00000617999 POLR3GLQ9BT43 218 aa21.27■■□□□ 1
UPK1A-204ENST00000617999 WASLO00401 505 aaPredicted RBP21.26■□□□□ 0.99
UPK1A-204ENST00000617999 CABP2Q9NPB3 220 aa21.26■□□□□ 0.99
UPK1A-204ENST00000617999 MON2Q7Z3U7 1717 aa21.26■□□□□ 0.99
UPK1A-204ENST00000617999 PRR36Q9H6K5 1346 aa21.26■□□□□ 0.99
UPK1A-204ENST00000617999 ATAD2Q6PL18 1390 aa21.25■□□□□ 0.99
UPK1A-204ENST00000617999 ANKARQ7Z5J8 1434 aa21.25■□□□□ 0.99
UPK1A-204ENST00000617999 CDK19Q9BWU1 502 aa21.25■□□□□ 0.99
UPK1A-204ENST00000617999 NRKQ7Z2Y5 1582 aa21.23■□□□□ 0.99
UPK1A-204ENST00000617999 SLC24A1O60721 1099 aa21.23■□□□□ 0.99
UPK1A-204ENST00000617999 SRPK2P78362 688 aaKnown RBP21.23■□□□□ 0.99
UPK1A-204ENST00000617999 MST1RQ04912 1400 aa21.22■□□□□ 0.99
UPK1A-204ENST00000617999 CD163L1Q9NR16 1453 aa21.22■□□□□ 0.99
UPK1A-204ENST00000617999 CDCA8Q53HL2 280 aa21.22■□□□□ 0.99
UPK1A-204ENST00000617999 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
UPK1A-204ENST00000617999 MSH6P52701 1360 aa21.22■□□□□ 0.99
UPK1A-204ENST00000617999 KIF1AQ12756 1690 aa21.21■□□□□ 0.99
UPK1A-204ENST00000617999 PPIP5K1Q6PFW1 1433 aa21.21■□□□□ 0.99
UPK1A-204ENST00000617999 PUS7Q96PZ0 661 aaKnown RBP21.19■□□□□ 0.98
UPK1A-204ENST00000617999 NINLQ9Y2I6 1382 aa21.19■□□□□ 0.98
UPK1A-204ENST00000617999 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
UPK1A-204ENST00000617999 C1orf167Q5SNV9 1468 aa21.17■□□□□ 0.98
UPK1A-204ENST00000617999 KIF20BQ96Q89 1820 aa21.17■□□□□ 0.98
UPK1A-204ENST00000617999 DDX10Q13206 875 aaKnown RBP21.16■□□□□ 0.98
UPK1A-204ENST00000617999 C19orf44Q9H6X5 657 aa21.16■□□□□ 0.98
UPK1A-204ENST00000617999 A0A1W2PP64 1363 aa21.15■□□□□ 0.98
UPK1A-204ENST00000617999 NUDT16Q96DE0 195 aaKnown RBP21.15■□□□□ 0.98
UPK1A-204ENST00000617999 ANKRD36BQ8N2N9 1353 aa21.14■□□□□ 0.98
UPK1A-204ENST00000617999 ANKRD26Q9UPS8 1709 aa21.12■□□□□ 0.97
UPK1A-204ENST00000617999 SLC12A5Q9H2X9 1139 aa21.12■□□□□ 0.97
UPK1A-204ENST00000617999 IQSEC2Q5JU85 1478 aa21.12■□□□□ 0.97
UPK1A-204ENST00000617999 TMC1Q8TDI8 760 aa21.11■□□□□ 0.97
UPK1A-204ENST00000617999 TRPM3Q9HCF6 1732 aaPredicted RBP21.11■□□□□ 0.97
UPK1A-204ENST00000617999 CPSF1Q10570 1443 aaKnown RBP21.11■□□□□ 0.97
UPK1A-204ENST00000617999 NHSL1Q5SYE7 1610 aa21.11■□□□□ 0.97
UPK1A-204ENST00000617999 CCDC61Q9Y6R9 512 aa21.1■□□□□ 0.97
UPK1A-204ENST00000617999 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
UPK1A-204ENST00000617999 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
UPK1A-204ENST00000617999 ATF3P18847 181 aa21.09■□□□□ 0.97
UPK1A-204ENST00000617999 CADPS2Q86UW7 1296 aa21.09■□□□□ 0.97
UPK1A-204ENST00000617999 POLR3AO14802 1390 aaPredicted RBP21.09■□□□□ 0.97
UPK1A-204ENST00000617999 CABP1Q9NZU7 370 aa21.08■□□□□ 0.97
UPK1A-204ENST00000617999 PANK3Q9H999 370 aa21.07■□□□□ 0.96
UPK1A-204ENST00000617999 MARF1Q9Y4F3 1742 aaKnown RBP21.07■□□□□ 0.96
UPK1A-204ENST00000617999 PIK3C2AO00443 1686 aa21.06■□□□□ 0.96
UPK1A-204ENST00000617999 USP6P35125 1406 aa21.06■□□□□ 0.96
UPK1A-204ENST00000617999 USP54Q70EL1 1684 aa21.05■□□□□ 0.96
UPK1A-204ENST00000617999 PLEKHG3A1L390 1219 aa21.04■□□□□ 0.96
UPK1A-204ENST00000617999 EDC4Q6P2E9 1401 aaKnown RBP21.04■□□□□ 0.96
UPK1A-204ENST00000617999 PMFBP1Q8TBY8 1022 aa21.03■□□□□ 0.96
UPK1A-204ENST00000617999 ORAI2Q96SN7 254 aa21.03■□□□□ 0.96
UPK1A-204ENST00000617999 ACEP12821 1306 aa21.03■□□□□ 0.96
UPK1A-204ENST00000617999 ALS2Q96Q42 1657 aa21.02■□□□□ 0.96
UPK1A-204ENST00000617999 KTN1Q86UP2 1357 aaKnown RBP21.02■□□□□ 0.96
UPK1A-204ENST00000617999 CARD14Q9BXL6 1004 aa21.02■□□□□ 0.96
UPK1A-204ENST00000617999 PHF8Q9UPP1 1060 aa21.02■□□□□ 0.96
UPK1A-204ENST00000617999 SSH2Q76I76 1423 aa21.02■□□□□ 0.96
UPK1A-204ENST00000617999 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
UPK1A-204ENST00000617999 TERF2IPQ9NYB0 399 aa21.01■□□□□ 0.95
UPK1A-204ENST00000617999 PXDNQ92626 1479 aa21.01■□□□□ 0.95
UPK1A-204ENST00000617999 PER1O15534 1290 aaPredicted RBP21■□□□□ 0.95
UPK1A-204ENST00000617999 DIEXFQ68CQ4 756 aaKnown RBP21■□□□□ 0.95
UPK1A-204ENST00000617999 HDGFL2Q7Z4V5 671 aaPredicted RBP21■□□□□ 0.95
UPK1A-204ENST00000617999 AHDC1Q5TGY3 1603 aaPredicted RBP21■□□□□ 0.95
UPK1A-204ENST00000617999 BRINP3Q76B58 766 aa20.98■□□□□ 0.95
UPK1A-204ENST00000617999 CRYBG1Q9Y4K1 1723 aa20.96■□□□□ 0.95
UPK1A-204ENST00000617999 NGDNQ8NEJ9 315 aaKnown RBP20.96■□□□□ 0.95
UPK1A-204ENST00000617999 SLAIN2Q9P270 581 aa20.96■□□□□ 0.95
UPK1A-204ENST00000617999 AMER1Q5JTC6 1135 aaPredicted RBP20.95■□□□□ 0.94
UPK1A-204ENST00000617999 CERKQ8TCT0 537 aa20.95■□□□□ 0.94
UPK1A-204ENST00000617999 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
UPK1A-204ENST00000617999 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms