RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 PRAM1Q96QH2 718 aa24.5■■□□□ 1.51
SBDS-205ENST00000617799 PLEKHH1Q9ULM0 1364 aa24.5■■□□□ 1.51
SBDS-205ENST00000617799 SAFB2Q14151 953 aaKnown RBP eCLIP24.49■■□□□ 1.51
SBDS-205ENST00000617799 DCCP43146 1447 aa24.48■■□□□ 1.51
SBDS-205ENST00000617799 CADPS2Q86UW7 1296 aa24.48■■□□□ 1.51
SBDS-205ENST00000617799 ARHGEF28Q8N1W1 1705 aaKnown RBP24.48■■□□□ 1.51
SBDS-205ENST00000617799 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
SBDS-205ENST00000617799 RALGAPBQ86X10 1494 aa24.45■■□□□ 1.51
SBDS-205ENST00000617799 CDC42BPGQ6DT37 1551 aa24.42■■□□□ 1.5
SBDS-205ENST00000617799 SLAIN2Q9P270 581 aa24.42■■□□□ 1.5
SBDS-205ENST00000617799 CARD11Q9BXL7 1154 aa24.4■■□□□ 1.5
SBDS-205ENST00000617799 MINK1Q8N4C8 1332 aaPredicted RBP24.39■■□□□ 1.5
SBDS-205ENST00000617799 ROBO1Q9Y6N7 1651 aa24.39■■□□□ 1.49
SBDS-205ENST00000617799 MST1RQ04912 1400 aa24.38■■□□□ 1.49
SBDS-205ENST00000617799 GPRASP1Q5JY77 1395 aa24.38■■□□□ 1.49
SBDS-205ENST00000617799 HIRIP3Q9BW71 556 aaPredicted RBP24.37■■□□□ 1.49
SBDS-205ENST00000617799 EIF3AQ14152 1382 aaKnown RBP24.37■■□□□ 1.49
SBDS-205ENST00000617799 CENPJQ9HC77 1338 aaPredicted RBP24.35■■□□□ 1.49
SBDS-205ENST00000617799 QRICH2Q9H0J4 1663 aa24.35■■□□□ 1.49
SBDS-205ENST00000617799 ADGRB2O60241 1585 aa24.35■■□□□ 1.49
SBDS-205ENST00000617799 ZEB1P37275 1124 aaPredicted RBP24.35■■□□□ 1.49
SBDS-205ENST00000617799 FMN2Q9NZ56 1722 aa24.35■■□□□ 1.49
SBDS-205ENST00000617799 NUTM2FA1L443 756 aa24.33■■□□□ 1.49
SBDS-205ENST00000617799 C1orf167Q5SNV9 1468 aa24.32■■□□□ 1.48
SBDS-205ENST00000617799 HSPA1LP34931 641 aa24.28■■□□□ 1.48
SBDS-205ENST00000617799 BRINP3Q76B58 766 aa24.28■■□□□ 1.48
SBDS-205ENST00000617799 WASLO00401 505 aaPredicted RBP24.26■■□□□ 1.47
SBDS-205ENST00000617799 PHLPP1O60346 1717 aa24.25■■□□□ 1.47
SBDS-205ENST00000617799 ESCO1Q5FWF5 840 aa24.25■■□□□ 1.47
SBDS-205ENST00000617799 ORAI2Q96SN7 254 aa24.24■■□□□ 1.47
SBDS-205ENST00000617799 TULP4Q9NRJ4 1543 aa24.24■■□□□ 1.47
SBDS-205ENST00000617799 RGPD8O14715 1765 aaPredicted RBP24.23■■□□□ 1.47
SBDS-205ENST00000617799 ANKARQ7Z5J8 1434 aa24.22■■□□□ 1.47
SBDS-205ENST00000617799 USP47Q96K76 1375 aa24.22■■□□□ 1.47
SBDS-205ENST00000617799 CDK19Q9BWU1 502 aa24.22■■□□□ 1.47
SBDS-205ENST00000617799 AHDC1Q5TGY3 1603 aaPredicted RBP24.21■■□□□ 1.47
SBDS-205ENST00000617799 USP32Q8NFA0 1604 aa24.21■■□□□ 1.47
SBDS-205ENST00000617799 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
SBDS-205ENST00000617799 NHSL1Q5SYE7 1610 aa24.21■■□□□ 1.47
SBDS-205ENST00000617799 KIF1AQ12756 1690 aa24.2■■□□□ 1.46
SBDS-205ENST00000617799 EVC2Q86UK5 1308 aa24.19■■□□□ 1.46
SBDS-205ENST00000617799 ITSN1Q15811 1721 aa24.18■■□□□ 1.46
SBDS-205ENST00000617799 DDX17Q92841 729 aaKnown RBP24.17■■□□□ 1.46
SBDS-205ENST00000617799 PRR36Q9H6K5 1346 aa24.16■■□□□ 1.46
SBDS-205ENST00000617799 ATP7BP35670 1465 aa24.16■■□□□ 1.46
SBDS-205ENST00000617799 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
SBDS-205ENST00000617799 NUDT16Q96DE0 195 aaKnown RBP24.16■■□□□ 1.46
SBDS-205ENST00000617799 PHF8Q9UPP1 1060 aa24.16■■□□□ 1.46
SBDS-205ENST00000617799 COL16A1Q07092 1604 aaPredicted RBP24.16■■□□□ 1.46
SBDS-205ENST00000617799 SBNO2Q9Y2G9 1366 aa24.16■■□□□ 1.46
SBDS-205ENST00000617799 CABP2Q9NPB3 220 aa24.15■■□□□ 1.46
SBDS-205ENST00000617799 NPHP3Q7Z494 1330 aa24.13■■□□□ 1.45
SBDS-205ENST00000617799 FOXO3O43524 673 aa24.13■■□□□ 1.45
SBDS-205ENST00000617799 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
SBDS-205ENST00000617799 TOPAZ1Q8N9V7 1692 aa24.11■■□□□ 1.45
SBDS-205ENST00000617799 XPCQ01831 940 aaPredicted RBP24.11■■□□□ 1.45
SBDS-205ENST00000617799 NGDNQ8NEJ9 315 aaKnown RBP24.09■■□□□ 1.45
SBDS-205ENST00000617799 CCDC61Q9Y6R9 512 aa24.09■■□□□ 1.45
SBDS-205ENST00000617799 EIF4G2P78344 907 aaKnown RBP eCLIP24.08■■□□□ 1.45
SBDS-205ENST00000617799 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.44
SBDS-205ENST00000617799 SLC24A1O60721 1099 aa24.07■■□□□ 1.44
SBDS-205ENST00000617799 PSME1Q06323 249 aa24.07■■□□□ 1.44
SBDS-205ENST00000617799 TESK2Q96S53 571 aa24.07■■□□□ 1.44
SBDS-205ENST00000617799 PXDNQ92626 1479 aa24.07■■□□□ 1.44
SBDS-205ENST00000617799 JCADQ9P266 1359 aa24.06■■□□□ 1.44
SBDS-205ENST00000617799 LRRC59Q96AG4 307 aaKnown RBP24.06■■□□□ 1.44
SBDS-205ENST00000617799 SOS2Q07890 1332 aaPredicted RBP24.06■■□□□ 1.44
SBDS-205ENST00000617799 ATAD2Q6PL18 1390 aa24.05■■□□□ 1.44
SBDS-205ENST00000617799 KRT28Q7Z3Y7 464 aa24.05■■□□□ 1.44
SBDS-205ENST00000617799 TMF1P82094 1093 aa24.04■■□□□ 1.44
SBDS-205ENST00000617799 HSPA5P11021 654 aaKnown RBP24.03■■□□□ 1.44
SBDS-205ENST00000617799 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
SBDS-205ENST00000617799 ACEP12821 1306 aa24.01■■□□□ 1.43
SBDS-205ENST00000617799 DISP3Q9P2K9 1392 aa24.01■■□□□ 1.43
SBDS-205ENST00000617799 PLEKHG3A1L390 1219 aa24■■□□□ 1.43
SBDS-205ENST00000617799 CABP1Q9NZU7 370 aa24■■□□□ 1.43
SBDS-205ENST00000617799 TMC1Q8TDI8 760 aa23.99■■□□□ 1.43
SBDS-205ENST00000617799 LMOD2Q6P5Q4 547 aa23.98■■□□□ 1.43
SBDS-205ENST00000617799 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
SBDS-205ENST00000617799 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
SBDS-205ENST00000617799 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
SBDS-205ENST00000617799 CDCA8Q53HL2 280 aa23.97■■□□□ 1.43
SBDS-205ENST00000617799 TNS3Q68CZ2 1445 aa23.97■■□□□ 1.43
SBDS-205ENST00000617799 SBNO1A3KN83 1393 aa23.96■■□□□ 1.43
SBDS-205ENST00000617799 TRPM3Q9HCF6 1732 aaPredicted RBP23.96■■□□□ 1.43
SBDS-205ENST00000617799 SPATA31A3Q5VYP0 1347 aa23.95■■□□□ 1.42
SBDS-205ENST00000617799 PUS7Q96PZ0 661 aaKnown RBP23.95■■□□□ 1.42
SBDS-205ENST00000617799 SPATA31A6Q5VVP1 1343 aa23.94■■□□□ 1.42
SBDS-205ENST00000617799 NUTM2BA6NNL0 878 aaPredicted RBP23.94■■□□□ 1.42
SBDS-205ENST00000617799 NUTM2EB1AL46 878 aaPredicted RBP23.94■■□□□ 1.42
SBDS-205ENST00000617799 NUTM2AQ8IVF1 878 aaPredicted RBP23.94■■□□□ 1.42
SBDS-205ENST00000617799 MED1Q15648 1581 aaPredicted RBP23.94■■□□□ 1.42
SBDS-205ENST00000617799 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
SBDS-205ENST00000617799 PLEKHG5O94827 1062 aa23.92■■□□□ 1.42
SBDS-205ENST00000617799 COL22A1Q8NFW1 1626 aaPredicted RBP23.92■■□□□ 1.42
SBDS-205ENST00000617799 ARHGEF10O15013 1369 aa23.91■■□□□ 1.42
SBDS-205ENST00000617799 AKAP12Q02952 1782 aa23.91■■□□□ 1.42
SBDS-205ENST00000617799 USP6P35125 1406 aa23.9■■□□□ 1.42
SBDS-205ENST00000617799 NINLQ9Y2I6 1382 aa23.9■■□□□ 1.42
SBDS-205ENST00000617799 ALS2Q96Q42 1657 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms