RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 CADPS2Q86UW7 1296 aa45.58■■■■■ 4.89
FMR1-216ENST00000616614 SLAIN2Q9P270 581 aa45.57■■■■■ 4.89
FMR1-216ENST00000616614 TIMELESSQ9UNS1 1208 aa45.57■■■■■ 4.89
FMR1-216ENST00000616614 SAFB2Q14151 953 aaKnown RBP eCLIP45.56■■■■■ 4.88
FMR1-216ENST00000616614 DCCP43146 1447 aa45.56■■■■■ 4.88
FMR1-216ENST00000616614 POGKQ9P215 609 aa45.53■■■■■ 4.88
FMR1-216ENST00000616614 ROCK2O75116 1388 aaKnown RBP45.52■■■■■ 4.88
FMR1-216ENST00000616614 GPRASP1Q5JY77 1395 aa45.47■■■■■ 4.87
FMR1-216ENST00000616614 MST1RQ04912 1400 aa45.46■■■■■ 4.87
FMR1-216ENST00000616614 ARHGEF28Q8N1W1 1705 aaKnown RBP45.45■■■■■ 4.87
FMR1-216ENST00000616614 RALGAPBQ86X10 1494 aa45.45■■■■■ 4.87
FMR1-216ENST00000616614 CDC42BPGQ6DT37 1551 aa45.4■■■■■ 4.86
FMR1-216ENST00000616614 MINK1Q8N4C8 1332 aaPredicted RBP45.39■■■■■ 4.86
FMR1-216ENST00000616614 HIRIP3Q9BW71 556 aaPredicted RBP45.38■■■■■ 4.86
FMR1-216ENST00000616614 CARD11Q9BXL7 1154 aa45.36■■■■■ 4.85
FMR1-216ENST00000616614 ROBO1Q9Y6N7 1651 aa45.35■■■■■ 4.85
FMR1-216ENST00000616614 C1orf167Q5SNV9 1468 aa45.35■■■■■ 4.85
FMR1-216ENST00000616614 HSPA1LP34931 641 aa45.35■■■■■ 4.85
FMR1-216ENST00000616614 BRINP3Q76B58 766 aa45.33■■■■■ 4.85
FMR1-216ENST00000616614 NUTM2FA1L443 756 aa45.32■■■■■ 4.85
FMR1-216ENST00000616614 CENPJQ9HC77 1338 aaPredicted RBP45.3■■■■■ 4.84
FMR1-216ENST00000616614 ADGRB2O60241 1585 aa45.28■■■■■ 4.84
FMR1-216ENST00000616614 ORAI2Q96SN7 254 aa45.27■■■■■ 4.84
FMR1-216ENST00000616614 WASLO00401 505 aaPredicted RBP45.23■■■■■ 4.83
FMR1-216ENST00000616614 FMN2Q9NZ56 1722 aa45.22■■■■■ 4.83
FMR1-216ENST00000616614 EIF3AQ14152 1382 aaKnown RBP45.17■■■■■ 4.82
FMR1-216ENST00000616614 ESCO1Q5FWF5 840 aa45.17■■■■■ 4.82
FMR1-216ENST00000616614 DDX17Q92841 729 aaKnown RBP45.16■■■■■ 4.82
FMR1-216ENST00000616614 PRR36Q9H6K5 1346 aa45.14■■■■■ 4.82
FMR1-216ENST00000616614 CDK19Q9BWU1 502 aa45.13■■■■■ 4.82
FMR1-216ENST00000616614 QRICH2Q9H0J4 1663 aa45.12■■■■■ 4.81
FMR1-216ENST00000616614 USP32Q8NFA0 1604 aa45.1■■■■■ 4.81
FMR1-216ENST00000616614 ANKARQ7Z5J8 1434 aa45.08■■■■■ 4.81
FMR1-216ENST00000616614 TULP4Q9NRJ4 1543 aa45.07■■■■■ 4.81
FMR1-216ENST00000616614 AHDC1Q5TGY3 1603 aaPredicted RBP45.07■■■■■ 4.81
FMR1-216ENST00000616614 ST20-MTHFSA0A0A6YYL1 179 aa45.02■■■■■ 4.8
FMR1-216ENST00000616614 NUDT16Q96DE0 195 aaKnown RBP45.01■■■■■ 4.8
FMR1-216ENST00000616614 PHLPP1O60346 1717 aa45.01■■■■■ 4.8
FMR1-216ENST00000616614 USP47Q96K76 1375 aa45.01■■■■■ 4.8
FMR1-216ENST00000616614 RGPD8O14715 1765 aaPredicted RBP45.01■■■■■ 4.8
FMR1-216ENST00000616614 FOXO3O43524 673 aa45.01■■■■■ 4.8
FMR1-216ENST00000616614 CABP2Q9NPB3 220 aa45.01■■■■■ 4.8
FMR1-216ENST00000616614 PHF8Q9UPP1 1060 aa45.01■■■■■ 4.8
FMR1-216ENST00000616614 NHSL1Q5SYE7 1610 aa45■■■■■ 4.79
FMR1-216ENST00000616614 ATP7BP35670 1465 aa45■■■■■ 4.79
FMR1-216ENST00000616614 COL16A1Q07092 1604 aaPredicted RBP44.99■■■■■ 4.79
FMR1-216ENST00000616614 SBNO2Q9Y2G9 1366 aa44.98■■■■■ 4.79
FMR1-216ENST00000616614 SRPK2P78362 688 aaKnown RBP44.97■■■■■ 4.79
FMR1-216ENST00000616614 PMFBP1Q8TBY8 1022 aa44.96■■■■■ 4.79
FMR1-216ENST00000616614 TESK2Q96S53 571 aa44.96■■■■■ 4.79
FMR1-216ENST00000616614 EVC2Q86UK5 1308 aa44.95■■■■■ 4.79
FMR1-216ENST00000616614 SOS2Q07890 1332 aaPredicted RBP44.93■■■■■ 4.78
FMR1-216ENST00000616614 XPCQ01831 940 aaPredicted RBP44.92■■■■■ 4.78
FMR1-216ENST00000616614 NPHP3Q7Z494 1330 aa44.91■■■■■ 4.78
FMR1-216ENST00000616614 CCDC61Q9Y6R9 512 aa44.9■■■■■ 4.78
FMR1-216ENST00000616614 KIF1AQ12756 1690 aa44.88■■■■■ 4.77
FMR1-216ENST00000616614 PXDNQ92626 1479 aa44.87■■■■■ 4.77
FMR1-216ENST00000616614 LRRC59Q96AG4 307 aaKnown RBP44.83■■■■■ 4.77
FMR1-216ENST00000616614 JCADQ9P266 1359 aa44.82■■■■■ 4.77
FMR1-216ENST00000616614 KRT28Q7Z3Y7 464 aa44.82■■■■■ 4.77
FMR1-216ENST00000616614 TOPAZ1Q8N9V7 1692 aa44.8■■■■■ 4.76
FMR1-216ENST00000616614 PLEKHG3A1L390 1219 aa44.8■■■■■ 4.76
FMR1-216ENST00000616614 PPIP5K1Q6PFW1 1433 aa44.78■■■■■ 4.76
FMR1-216ENST00000616614 NGDNQ8NEJ9 315 aaKnown RBP44.77■■■■■ 4.76
FMR1-216ENST00000616614 PSME1Q06323 249 aa44.76■■■■■ 4.76
FMR1-216ENST00000616614 CABP1Q9NZU7 370 aa44.76■■■■■ 4.76
FMR1-216ENST00000616614 ITSN1Q15811 1721 aa44.74■■■■■ 4.75
FMR1-216ENST00000616614 HSPA5P11021 654 aaKnown RBP44.74■■■■■ 4.75
FMR1-216ENST00000616614 ACEP12821 1306 aa44.74■■■■■ 4.75
FMR1-216ENST00000616614 EIF4G2P78344 907 aaKnown RBP eCLIP44.73■■■■■ 4.75
FMR1-216ENST00000616614 POLR3AO14802 1390 aaPredicted RBP44.72■■■■■ 4.75
FMR1-216ENST00000616614 DISP3Q9P2K9 1392 aa44.72■■■■■ 4.75
FMR1-216ENST00000616614 PNPLA6Q8IY17 1366 aa44.71■■■■■ 4.75
FMR1-216ENST00000616614 ATAD2Q6PL18 1390 aa44.69■■■■■ 4.75
FMR1-216ENST00000616614 SPATA31A3Q5VYP0 1347 aa44.68■■■■■ 4.74
FMR1-216ENST00000616614 SLC24A1O60721 1099 aa44.67■■■■■ 4.74
FMR1-216ENST00000616614 TMF1P82094 1093 aa44.66■■■■■ 4.74
FMR1-216ENST00000616614 PUS7Q96PZ0 661 aaKnown RBP44.66■■■■■ 4.74
FMR1-216ENST00000616614 SBNO1A3KN83 1393 aa44.64■■■■■ 4.74
FMR1-216ENST00000616614 SHPRHQ149N8 1683 aa44.64■■■■■ 4.74
FMR1-216ENST00000616614 SPATA31A6Q5VVP1 1343 aa44.61■■■■■ 4.73
FMR1-216ENST00000616614 TNS3Q68CZ2 1445 aa44.59■■■■■ 4.73
FMR1-216ENST00000616614 SLC12A5Q9H2X9 1139 aa44.58■■■■■ 4.73
FMR1-216ENST00000616614 TRPM3Q9HCF6 1732 aaPredicted RBP44.57■■■■■ 4.73
FMR1-216ENST00000616614 LRP6O75581 1613 aa44.56■■■■■ 4.72
FMR1-216ENST00000616614 MED1Q15648 1581 aaPredicted RBP44.55■■■■■ 4.72
FMR1-216ENST00000616614 TMC1Q8TDI8 760 aa44.55■■■■■ 4.72
FMR1-216ENST00000616614 NUTM2BA6NNL0 878 aaPredicted RBP44.54■■■■■ 4.72
FMR1-216ENST00000616614 NUTM2EB1AL46 878 aaPredicted RBP44.54■■■■■ 4.72
FMR1-216ENST00000616614 NUTM2AQ8IVF1 878 aaPredicted RBP44.54■■■■■ 4.72
FMR1-216ENST00000616614 PAK3O75914 559 aaPredicted RBP44.53■■■■■ 4.72
FMR1-216ENST00000616614 LMOD2Q6P5Q4 547 aa44.52■■■■■ 4.72
FMR1-216ENST00000616614 CPSF1Q10570 1443 aaKnown RBP44.51■■■■■ 4.72
FMR1-216ENST00000616614 CD163L1Q9NR16 1453 aa44.5■■■■■ 4.71
FMR1-216ENST00000616614 USP6P35125 1406 aa44.49■■■■■ 4.71
FMR1-216ENST00000616614 COL22A1Q8NFW1 1626 aaPredicted RBP44.49■■■■■ 4.71
FMR1-216ENST00000616614 ARHGEF10O15013 1369 aa44.46■■■■■ 4.71
FMR1-216ENST00000616614 CDCA8Q53HL2 280 aa44.46■■■■■ 4.71
FMR1-216ENST00000616614 SSH2Q76I76 1423 aa44.45■■■■■ 4.71
FMR1-216ENST00000616614 ZNF692Q9BU19 519 aaPredicted RBP44.45■■■■■ 4.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms