RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 CDC42BPGQ6DT37 1551 aa32.11■■■□□ 2.73
CBWD3-212ENST00000616550 ILDR2Q71H61 639 aa32.1■■■□□ 2.73
CBWD3-212ENST00000616550 ORAI2Q96SN7 254 aa32.09■■■□□ 2.73
CBWD3-212ENST00000616550 ADGRB1O14514 1584 aa32.08■■■□□ 2.73
CBWD3-212ENST00000616550 PRAM1Q96QH2 718 aa32.08■■■□□ 2.73
CBWD3-212ENST00000616550 POGKQ9P215 609 aa32.08■■■□□ 2.73
CBWD3-212ENST00000616550 NHSL1Q5SYE7 1610 aa32.08■■■□□ 2.73
CBWD3-212ENST00000616550 TRAK1Q9UPV9 953 aa32.07■■■□□ 2.72
CBWD3-212ENST00000616550 SIN3AQ96ST3 1273 aa32.06■■■□□ 2.72
CBWD3-212ENST00000616550 DLC1Q96QB1 1528 aa32.05■■■□□ 2.72
CBWD3-212ENST00000616550 SAFB2Q14151 953 aaKnown RBP eCLIP32.05■■■□□ 2.72
CBWD3-212ENST00000616550 DDX17Q92841 729 aaKnown RBP32.05■■■□□ 2.72
CBWD3-212ENST00000616550 ESCO1Q5FWF5 840 aa32.04■■■□□ 2.72
CBWD3-212ENST00000616550 NEUROD1Q13562 356 aa32.03■■■□□ 2.72
CBWD3-212ENST00000616550 LRRC59Q96AG4 307 aaKnown RBP32.03■■■□□ 2.72
CBWD3-212ENST00000616550 NUTM2FA1L443 756 aa32.02■■■□□ 2.72
CBWD3-212ENST00000616550 SPATA31A6Q5VVP1 1343 aa32.01■■■□□ 2.72
CBWD3-212ENST00000616550 SHPRHQ149N8 1683 aa31.99■■■□□ 2.71
CBWD3-212ENST00000616550 L3MBTL2Q969R5 705 aa31.99■■■□□ 2.71
CBWD3-212ENST00000616550 FMN2Q9NZ56 1722 aa31.97■■■□□ 2.71
CBWD3-212ENST00000616550 KIAA1210Q9ULL0 1709 aa31.96■■■□□ 2.71
CBWD3-212ENST00000616550 SOS2Q07890 1332 aaPredicted RBP31.94■■■□□ 2.7
CBWD3-212ENST00000616550 NPHP3Q7Z494 1330 aa31.94■■■□□ 2.7
CBWD3-212ENST00000616550 FOXO3O43524 673 aa31.91■■■□□ 2.7
CBWD3-212ENST00000616550 MEX3CQ5U5Q3 659 aaKnown RBP31.91■■■□□ 2.7
CBWD3-212ENST00000616550 MINK1Q8N4C8 1332 aaPredicted RBP31.91■■■□□ 2.7
CBWD3-212ENST00000616550 NUTM2BA6NNL0 878 aaPredicted RBP31.9■■■□□ 2.7
CBWD3-212ENST00000616550 NUTM2EB1AL46 878 aaPredicted RBP31.9■■■□□ 2.7
CBWD3-212ENST00000616550 NBPF1Q3BBV0 1214 aa31.9■■■□□ 2.7
CBWD3-212ENST00000616550 NUTM2AQ8IVF1 878 aaPredicted RBP31.9■■■□□ 2.7
CBWD3-212ENST00000616550 HIRIP3Q9BW71 556 aaPredicted RBP31.9■■■□□ 2.7
CBWD3-212ENST00000616550 RGS17Q9UGC6 210 aaPredicted RBP31.9■■■□□ 2.7
CBWD3-212ENST00000616550 RGPD8O14715 1765 aaPredicted RBP31.87■■■□□ 2.69
CBWD3-212ENST00000616550 ARHGEF28Q8N1W1 1705 aaKnown RBP31.87■■■□□ 2.69
CBWD3-212ENST00000616550 LRP6O75581 1613 aa31.87■■■□□ 2.69
CBWD3-212ENST00000616550 PNPLA6Q8IY17 1366 aa31.87■■■□□ 2.69
CBWD3-212ENST00000616550 ADGRB2O60241 1585 aa31.86■■■□□ 2.69
CBWD3-212ENST00000616550 KIF1AQ12756 1690 aa31.84■■■□□ 2.69
CBWD3-212ENST00000616550 XPCQ01831 940 aaPredicted RBP31.83■■■□□ 2.69
CBWD3-212ENST00000616550 PHF8Q9UPP1 1060 aa31.83■■■□□ 2.69
CBWD3-212ENST00000616550 WASLO00401 505 aaPredicted RBP31.82■■■□□ 2.68
CBWD3-212ENST00000616550 EIF3AQ14152 1382 aaKnown RBP31.81■■■□□ 2.68
CBWD3-212ENST00000616550 PXDNQ92626 1479 aa31.81■■■□□ 2.68
CBWD3-212ENST00000616550 SOCS7O14512 581 aa31.81■■■□□ 2.68
CBWD3-212ENST00000616550 ANKARQ7Z5J8 1434 aa31.81■■■□□ 2.68
CBWD3-212ENST00000616550 KRT28Q7Z3Y7 464 aa31.77■■■□□ 2.68
CBWD3-212ENST00000616550 POTEAQ6S8J7 498 aa31.76■■■□□ 2.67
CBWD3-212ENST00000616550 USP32Q8NFA0 1604 aa31.75■■■□□ 2.67
CBWD3-212ENST00000616550 PSME1Q06323 249 aa31.75■■■□□ 2.67
CBWD3-212ENST00000616550 TONSLQ96HA7 1378 aa31.75■■■□□ 2.67
CBWD3-212ENST00000616550 PMFBP1Q8TBY8 1022 aa31.74■■■□□ 2.67
CBWD3-212ENST00000616550 TULP4Q9NRJ4 1543 aa31.74■■■□□ 2.67
CBWD3-212ENST00000616550 ZNF772Q68DY9 489 aaPredicted RBP31.73■■■□□ 2.67
CBWD3-212ENST00000616550 TRPM1Q7Z4N2 1603 aa31.73■■■□□ 2.67
CBWD3-212ENST00000616550 ROCK2O75116 1388 aaKnown RBP31.71■■■□□ 2.67
CBWD3-212ENST00000616550 CDK19Q9BWU1 502 aa31.71■■■□□ 2.67
CBWD3-212ENST00000616550 PRR36Q9H6K5 1346 aa31.71■■■□□ 2.67
CBWD3-212ENST00000616550 CENPJQ9HC77 1338 aaPredicted RBP31.71■■■□□ 2.67
CBWD3-212ENST00000616550 ADAMTS2O95450 1211 aa31.7■■■□□ 2.67
CBWD3-212ENST00000616550 COL22A1Q8NFW1 1626 aaPredicted RBP31.7■■■□□ 2.66
CBWD3-212ENST00000616550 SPATA31A3Q5VYP0 1347 aa31.7■■■□□ 2.66
CBWD3-212ENST00000616550 C8orf37Q96NL8 207 aa31.69■■■□□ 2.66
CBWD3-212ENST00000616550 NBPF8Q3BBV2 869 aa31.68■■■□□ 2.66
CBWD3-212ENST00000616550 NUDT16Q96DE0 195 aaKnown RBP31.68■■■□□ 2.66
CBWD3-212ENST00000616550 PCGF6Q9BYE7 350 aa31.67■■■□□ 2.66
CBWD3-212ENST00000616550 AFF2P51816 1311 aa31.66■■■□□ 2.66
CBWD3-212ENST00000616550 NGDNQ8NEJ9 315 aaKnown RBP31.64■■■□□ 2.66
CBWD3-212ENST00000616550 NGLY1Q96IV0 654 aa31.64■■■□□ 2.66
CBWD3-212ENST00000616550 SBNO1A3KN83 1393 aa31.63■■■□□ 2.65
CBWD3-212ENST00000616550 GPRASP1Q5JY77 1395 aa31.63■■■□□ 2.65
CBWD3-212ENST00000616550 ITSN1Q15811 1721 aa31.62■■■□□ 2.65
CBWD3-212ENST00000616550 ATP7BP35670 1465 aa31.61■■■□□ 2.65
CBWD3-212ENST00000616550 TNS3Q68CZ2 1445 aa31.61■■■□□ 2.65
CBWD3-212ENST00000616550 LMOD2Q6P5Q4 547 aa31.61■■■□□ 2.65
CBWD3-212ENST00000616550 QRICH2Q9H0J4 1663 aa31.6■■■□□ 2.65
CBWD3-212ENST00000616550 SRPK2P78362 688 aaKnown RBP31.59■■■□□ 2.65
CBWD3-212ENST00000616550 CCDC61Q9Y6R9 512 aa31.59■■■□□ 2.65
CBWD3-212ENST00000616550 ARHGEF10O15013 1369 aa31.57■■■□□ 2.64
CBWD3-212ENST00000616550 HAP1P54257 671 aaPredicted RBP31.55■■■□□ 2.64
CBWD3-212ENST00000616550 CARD11Q9BXL7 1154 aa31.55■■■□□ 2.64
CBWD3-212ENST00000616550 RXRBP28702 533 aa31.54■■■□□ 2.64
CBWD3-212ENST00000616550 QTRT2Q9H974 415 aaKnown RBP31.53■■■□□ 2.64
CBWD3-212ENST00000616550 CABP2Q9NPB3 220 aa31.53■■■□□ 2.64
CBWD3-212ENST00000616550 MARF1Q9Y4F3 1742 aaKnown RBP31.52■■■□□ 2.64
CBWD3-212ENST00000616550 EVC2Q86UK5 1308 aa31.52■■■□□ 2.64
CBWD3-212ENST00000616550 PLEKHG5O94827 1062 aa31.52■■■□□ 2.64
CBWD3-212ENST00000616550 TRPM3Q9HCF6 1732 aaPredicted RBP31.52■■■□□ 2.64
CBWD3-212ENST00000616550 PLEKHG3A1L390 1219 aa31.51■■■□□ 2.63
CBWD3-212ENST00000616550 PAK3O75914 559 aaPredicted RBP31.51■■■□□ 2.63
CBWD3-212ENST00000616550 USP21Q9UK80 565 aa31.51■■■□□ 2.63
CBWD3-212ENST00000616550 FNBP4Q8N3X1 1017 aaPredicted RBP31.5■■■□□ 2.63
CBWD3-212ENST00000616550 CABLES1Q8TDN4 633 aa31.5■■■□□ 2.63
CBWD3-212ENST00000616550 RALGAPBQ86X10 1494 aa31.5■■■□□ 2.63
CBWD3-212ENST00000616550 TOPAZ1Q8N9V7 1692 aa31.5■■■□□ 2.63
CBWD3-212ENST00000616550 ACEP12821 1306 aa31.49■■■□□ 2.63
CBWD3-212ENST00000616550 CLSPNQ9HAW4 1339 aa31.48■■■□□ 2.63
CBWD3-212ENST00000616550 POLR3AO14802 1390 aaPredicted RBP31.47■■■□□ 2.63
CBWD3-212ENST00000616550 ALS2Q96Q42 1657 aa31.45■■■□□ 2.63
CBWD3-212ENST00000616550 PPIP5K1Q6PFW1 1433 aa31.45■■■□□ 2.63
CBWD3-212ENST00000616550 TRPC5Q9UL62 973 aaPredicted RBP31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms