RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 DLC1Q96QB1 1528 aa36.48■■■■□ 3.43
SURF1-205ENST00000615505 KIAA1210Q9ULL0 1709 aa36.44■■■■□ 3.42
SURF1-205ENST00000615505 CDC42BPGQ6DT37 1551 aa36.43■■■■□ 3.42
SURF1-205ENST00000615505 SAFB2Q14151 953 aaKnown RBP eCLIP36.42■■■■□ 3.42
SURF1-205ENST00000615505 C1orf167Q5SNV9 1468 aa36.42■■■■□ 3.42
SURF1-205ENST00000615505 PHLPP1O60346 1717 aa36.39■■■■□ 3.42
SURF1-205ENST00000615505 TONSLQ96HA7 1378 aa36.39■■■■□ 3.42
SURF1-205ENST00000615505 NBPF1Q3BBV0 1214 aa36.38■■■■□ 3.41
SURF1-205ENST00000615505 AHDC1Q5TGY3 1603 aaPredicted RBP36.35■■■■□ 3.41
SURF1-205ENST00000615505 ORAI2Q96SN7 254 aa36.33■■■■□ 3.41
SURF1-205ENST00000615505 ESCO1Q5FWF5 840 aa36.31■■■■□ 3.4
SURF1-205ENST00000615505 NUTM2FA1L443 756 aa36.3■■■■□ 3.4
SURF1-205ENST00000615505 COL16A1Q07092 1604 aaPredicted RBP36.28■■■■□ 3.4
SURF1-205ENST00000615505 MINK1Q8N4C8 1332 aaPredicted RBP36.27■■■■□ 3.4
SURF1-205ENST00000615505 JCADQ9P266 1359 aa36.27■■■■□ 3.4
SURF1-205ENST00000615505 DISP3Q9P2K9 1392 aa36.26■■■■□ 3.39
SURF1-205ENST00000615505 ARHGEF28Q8N1W1 1705 aaKnown RBP36.25■■■■□ 3.39
SURF1-205ENST00000615505 FMN2Q9NZ56 1722 aa36.25■■■■□ 3.39
SURF1-205ENST00000615505 HIRIP3Q9BW71 556 aaPredicted RBP36.25■■■■□ 3.39
SURF1-205ENST00000615505 CLSPNQ9HAW4 1339 aa36.25■■■■□ 3.39
SURF1-205ENST00000615505 NHSL1Q5SYE7 1610 aa36.24■■■■□ 3.39
SURF1-205ENST00000615505 DDX17Q92841 729 aaKnown RBP36.24■■■■□ 3.39
SURF1-205ENST00000615505 TRPM1Q7Z4N2 1603 aa36.23■■■■□ 3.39
SURF1-205ENST00000615505 NBPF8Q3BBV2 869 aa36.22■■■■□ 3.39
SURF1-205ENST00000615505 ROCK2O75116 1388 aaKnown RBP36.22■■■■□ 3.39
SURF1-205ENST00000615505 ADGRB2O60241 1585 aa36.22■■■■□ 3.39
SURF1-205ENST00000615505 LRRC59Q96AG4 307 aaKnown RBP36.21■■■■□ 3.39
SURF1-205ENST00000615505 MED1Q15648 1581 aaPredicted RBP36.2■■■■□ 3.39
SURF1-205ENST00000615505 WASLO00401 505 aaPredicted RBP36.18■■■■□ 3.38
SURF1-205ENST00000615505 EIF3AQ14152 1382 aaKnown RBP36.17■■■■□ 3.38
SURF1-205ENST00000615505 NPHP3Q7Z494 1330 aa36.17■■■■□ 3.38
SURF1-205ENST00000615505 FOXO3O43524 673 aa36.15■■■■□ 3.38
SURF1-205ENST00000615505 ANKARQ7Z5J8 1434 aa36.15■■■■□ 3.38
SURF1-205ENST00000615505 SOS2Q07890 1332 aaPredicted RBP36.14■■■■□ 3.38
SURF1-205ENST00000615505 CENPJQ9HC77 1338 aaPredicted RBP36.14■■■■□ 3.38
SURF1-205ENST00000615505 CCER1Q8TC90 406 aaPredicted RBP36.13■■■■□ 3.37
SURF1-205ENST00000615505 PHF8Q9UPP1 1060 aa36.12■■■■□ 3.37
SURF1-205ENST00000615505 SPATA31A6Q5VVP1 1343 aa36.11■■■■□ 3.37
SURF1-205ENST00000615505 PHF23Q9BUL5 403 aaPredicted RBP36.09■■■■□ 3.37
SURF1-205ENST00000615505 TIMELESSQ9UNS1 1208 aa36.09■■■■□ 3.37
SURF1-205ENST00000615505 GPRASP1Q5JY77 1395 aa36.09■■■■□ 3.37
SURF1-205ENST00000615505 KIF1AQ12756 1690 aa36.08■■■■□ 3.37
SURF1-205ENST00000615505 SHPRHQ149N8 1683 aa36.08■■■■□ 3.37
SURF1-205ENST00000615505 TULP4Q9NRJ4 1543 aa36.08■■■■□ 3.37
SURF1-205ENST00000615505 CARD11Q9BXL7 1154 aa36.07■■■■□ 3.36
SURF1-205ENST00000615505 RGPD8O14715 1765 aaPredicted RBP36.07■■■■□ 3.36
SURF1-205ENST00000615505 CDK19Q9BWU1 502 aa36.06■■■■□ 3.36
SURF1-205ENST00000615505 RALGAPBQ86X10 1494 aa36.05■■■■□ 3.36
SURF1-205ENST00000615505 XPCQ01831 940 aaPredicted RBP36.04■■■■□ 3.36
SURF1-205ENST00000615505 USP32Q8NFA0 1604 aa36.04■■■■□ 3.36
SURF1-205ENST00000615505 PRR36Q9H6K5 1346 aa36.03■■■■□ 3.36
SURF1-205ENST00000615505 PXDNQ92626 1479 aa36.02■■■■□ 3.36
SURF1-205ENST00000615505 PNPLA6Q8IY17 1366 aa36.02■■■■□ 3.36
SURF1-205ENST00000615505 PMFBP1Q8TBY8 1022 aa36.01■■■■□ 3.36
SURF1-205ENST00000615505 NUDT16Q96DE0 195 aaKnown RBP36.01■■■■□ 3.36
SURF1-205ENST00000615505 KRT28Q7Z3Y7 464 aa36■■■■□ 3.35
SURF1-205ENST00000615505 PSME1Q06323 249 aa35.99■■■■□ 3.35
SURF1-205ENST00000615505 QRICH2Q9H0J4 1663 aa35.98■■■■□ 3.35
SURF1-205ENST00000615505 NUTM2BA6NNL0 878 aaPredicted RBP35.98■■■■□ 3.35
SURF1-205ENST00000615505 NUTM2EB1AL46 878 aaPredicted RBP35.98■■■■□ 3.35
SURF1-205ENST00000615505 NUTM2AQ8IVF1 878 aaPredicted RBP35.98■■■■□ 3.35
SURF1-205ENST00000615505 MEX3CQ5U5Q3 659 aaKnown RBP35.96■■■■□ 3.35
SURF1-205ENST00000615505 SRPK2P78362 688 aaKnown RBP35.95■■■■□ 3.35
SURF1-205ENST00000615505 ATP7BP35670 1465 aa35.94■■■■□ 3.34
SURF1-205ENST00000615505 CCDC61Q9Y6R9 512 aa35.93■■■■□ 3.34
SURF1-205ENST00000615505 LRP6O75581 1613 aa35.93■■■■□ 3.34
SURF1-205ENST00000615505 EVC2Q86UK5 1308 aa35.92■■■■□ 3.34
SURF1-205ENST00000615505 NGDNQ8NEJ9 315 aaKnown RBP35.92■■■■□ 3.34
SURF1-205ENST00000615505 SPATA31A3Q5VYP0 1347 aa35.9■■■■□ 3.34
SURF1-205ENST00000615505 ITSN1Q15811 1721 aa35.89■■■■□ 3.34
SURF1-205ENST00000615505 CABP2Q9NPB3 220 aa35.89■■■■□ 3.34
SURF1-205ENST00000615505 SBNO1A3KN83 1393 aa35.87■■■■□ 3.33
SURF1-205ENST00000615505 TNS3Q68CZ2 1445 aa35.83■■■■□ 3.33
SURF1-205ENST00000615505 COL22A1Q8NFW1 1626 aaPredicted RBP35.83■■■■□ 3.33
SURF1-205ENST00000615505 PLEKHG3A1L390 1219 aa35.83■■■■□ 3.33
SURF1-205ENST00000615505 RGS17Q9UGC6 210 aaPredicted RBP35.83■■■■□ 3.33
SURF1-205ENST00000615505 SBNO2Q9Y2G9 1366 aa35.82■■■■□ 3.32
SURF1-205ENST00000615505 ILDR2Q71H61 639 aa35.82■■■■□ 3.32
SURF1-205ENST00000615505 LMOD2Q6P5Q4 547 aa35.81■■■■□ 3.32
SURF1-205ENST00000615505 TOPAZ1Q8N9V7 1692 aa35.8■■■■□ 3.32
SURF1-205ENST00000615505 ADAMTS2O95450 1211 aa35.79■■■■□ 3.32
SURF1-205ENST00000615505 ACEP12821 1306 aa35.79■■■■□ 3.32
SURF1-205ENST00000615505 POLR3AO14802 1390 aaPredicted RBP35.78■■■■□ 3.32
SURF1-205ENST00000615505 ARHGEF10O15013 1369 aa35.78■■■■□ 3.32
SURF1-205ENST00000615505 PPIP5K1Q6PFW1 1433 aa35.78■■■■□ 3.32
SURF1-205ENST00000615505 C8orf37Q96NL8 207 aa35.75■■■■□ 3.31
SURF1-205ENST00000615505 PAK3O75914 559 aaPredicted RBP35.74■■■■□ 3.31
SURF1-205ENST00000615505 ZNF772Q68DY9 489 aaPredicted RBP35.74■■■■□ 3.31
SURF1-205ENST00000615505 CABP1Q9NZU7 370 aa35.74■■■■□ 3.31
SURF1-205ENST00000615505 ST20-MTHFSA0A0A6YYL1 179 aa35.73■■■■□ 3.31
SURF1-205ENST00000615505 SLC24A1O60721 1099 aa35.72■■■■□ 3.31
SURF1-205ENST00000615505 TRPM3Q9HCF6 1732 aaPredicted RBP35.71■■■■□ 3.31
SURF1-205ENST00000615505 NGLY1Q96IV0 654 aa35.71■■■■□ 3.31
SURF1-205ENST00000615505 ATAD2Q6PL18 1390 aa35.71■■■■□ 3.31
SURF1-205ENST00000615505 HAP1P54257 671 aaPredicted RBP35.7■■■■□ 3.31
SURF1-205ENST00000615505 USP47Q96K76 1375 aa35.69■■■■□ 3.3
SURF1-205ENST00000615505 AFF2P51816 1311 aa35.69■■■■□ 3.3
SURF1-205ENST00000615505 POTEAQ6S8J7 498 aa35.69■■■■□ 3.3
SURF1-205ENST00000615505 PLEKHG5O94827 1062 aa35.66■■■■□ 3.3
SURF1-205ENST00000615505 CABLES1Q8TDN4 633 aa35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms