RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 IPO8O15397 1037 aaKnown RBP14.65□□□□□ -0.06
CDH5-208ENST00000614547 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
CDH5-208ENST00000614547 SCAPERQ9BY12 1400 aa14.65□□□□□ -0.06
CDH5-208ENST00000614547 CEP170Q5SW79 1584 aa14.65□□□□□ -0.06
CDH5-208ENST00000614547 A0A0U1RQG5 324 aaPredicted RBP14.65□□□□□ -0.06
CDH5-208ENST00000614547 ARHGAP5Q13017 1502 aa14.64□□□□□ -0.07
CDH5-208ENST00000614547 SSFA2P28290 1259 aa14.64□□□□□ -0.07
CDH5-208ENST00000614547 GGNBP2Q9H3C7 697 aa14.64□□□□□ -0.07
CDH5-208ENST00000614547 DDX19BQ9UMR2 479 aa14.64□□□□□ -0.07
CDH5-208ENST00000614547 NUTM2FA1L443 756 aa14.64□□□□□ -0.07
CDH5-208ENST00000614547 USP19O94966 1318 aa14.63□□□□□ -0.07
CDH5-208ENST00000614547 SOX12O15370 315 aa14.63□□□□□ -0.07
CDH5-208ENST00000614547 BCL11BQ9C0K0 894 aaPredicted RBP14.63□□□□□ -0.07
CDH5-208ENST00000614547 CTTNBP2Q8WZ74 1663 aa14.63□□□□□ -0.07
CDH5-208ENST00000614547 PBRM1Q86U86 1689 aa14.63□□□□□ -0.07
CDH5-208ENST00000614547 RIPK4P57078 832 aa14.63□□□□□ -0.07
CDH5-208ENST00000614547 ERCC6L2Q5T890 1561 aa14.63□□□□□ -0.07
CDH5-208ENST00000614547 TMEM57Q8N5G2 664 aa14.62□□□□□ -0.07
CDH5-208ENST00000614547 PRDM10Q9NQV6 1147 aa14.62□□□□□ -0.07
CDH5-208ENST00000614547 GPATCH8Q9UKJ3 1502 aaKnown RBP14.62□□□□□ -0.07
CDH5-208ENST00000614547 XPCQ01831 940 aaPredicted RBP14.61□□□□□ -0.07
CDH5-208ENST00000614547 PRPF40AO75400 957 aaKnown RBP14.61□□□□□ -0.07
CDH5-208ENST00000614547 SKOR2Q2VWA4 1001 aaPredicted RBP14.61□□□□□ -0.07
CDH5-208ENST00000614547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDH5-208ENST00000614547 SSH1Q8WYL5 1049 aa14.6□□□□□ -0.07
CDH5-208ENST00000614547 PRAG1Q86YV5 1406 aa14.6□□□□□ -0.07
CDH5-208ENST00000614547 CABP2Q9NPB3 220 aa14.59□□□□□ -0.07
CDH5-208ENST00000614547 CASC1Q6TDU7 716 aa14.58□□□□□ -0.07
CDH5-208ENST00000614547 HMOX1P09601 288 aa14.58□□□□□ -0.08
CDH5-208ENST00000614547 TRIM27P14373 513 aa14.58□□□□□ -0.08
CDH5-208ENST00000614547 KIAA0556O60303 1618 aa14.58□□□□□ -0.08
CDH5-208ENST00000614547 GAS2L3Q86XJ1 694 aa14.58□□□□□ -0.08
CDH5-208ENST00000614547 THUMPD2Q9BTF0 503 aaKnown RBP14.58□□□□□ -0.08
CDH5-208ENST00000614547 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.08
CDH5-208ENST00000614547 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
CDH5-208ENST00000614547 PLEKHH2Q8IVE3 1493 aa14.57□□□□□ -0.08
CDH5-208ENST00000614547 KDM5CP41229 1560 aa14.57□□□□□ -0.08
CDH5-208ENST00000614547 CARD14Q9BXL6 1004 aa14.57□□□□□ -0.08
CDH5-208ENST00000614547 ANTXR1Q9H6X2 564 aa14.57□□□□□ -0.08
CDH5-208ENST00000614547 BLMP54132 1417 aaPredicted RBP14.57□□□□□ -0.08
CDH5-208ENST00000614547 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
CDH5-208ENST00000614547 ZMYM4Q5VZL5 1548 aa14.55□□□□□ -0.08
CDH5-208ENST00000614547 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.55□□□□□ -0.08
CDH5-208ENST00000614547 RBM27Q9P2N5 1060 aaKnown RBP14.55□□□□□ -0.08
CDH5-208ENST00000614547 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
CDH5-208ENST00000614547 TPM2P07951 284 aa14.55□□□□□ -0.08
CDH5-208ENST00000614547 SLC4A10Q6U841 1118 aa14.55□□□□□ -0.08
CDH5-208ENST00000614547 CHD1LQ86WJ1 897 aa14.55□□□□□ -0.08
CDH5-208ENST00000614547 CCDC173Q0VFZ6 552 aa14.54□□□□□ -0.08
CDH5-208ENST00000614547 ZSCAN30Q86W11 494 aa14.54□□□□□ -0.08
CDH5-208ENST00000614547 NUP160Q12769 1436 aa14.54□□□□□ -0.08
CDH5-208ENST00000614547 UQCRHLA0A096LP55 91 aa14.54□□□□□ -0.08
CDH5-208ENST00000614547 UQCRHP07919 91 aa14.54□□□□□ -0.08
CDH5-208ENST00000614547 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
CDH5-208ENST00000614547 ERBB4Q15303 1308 aa14.53□□□□□ -0.08
CDH5-208ENST00000614547 KIF14Q15058 1648 aa14.53□□□□□ -0.08
CDH5-208ENST00000614547 MINK1Q8N4C8 1332 aaPredicted RBP14.53□□□□□ -0.08
CDH5-208ENST00000614547 RAPGEF6Q8TEU7 1601 aa14.52□□□□□ -0.08
CDH5-208ENST00000614547 FBLN1P23142 703 aa14.52□□□□□ -0.09
CDH5-208ENST00000614547 PTMSP20962 102 aa14.52□□□□□ -0.09
CDH5-208ENST00000614547 NGEFQ8N5V2 710 aa14.52□□□□□ -0.09
CDH5-208ENST00000614547 CHAMP1Q96JM3 812 aa14.52□□□□□ -0.09
CDH5-208ENST00000614547 KANK1Q14678 1352 aa14.52□□□□□ -0.09
CDH5-208ENST00000614547 TRIM6-TRIM34B2RNG4 842 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 GAS2L2Q8NHY3 880 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 ZNF521Q96K83 1311 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 KIAA2012Q0VF49 1180 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 NSD3Q9BZ95 1437 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 ADGRF5Q8IZF2 1346 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 SYCE3A1L190 88 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 ST18O60284 1047 aa14.51□□□□□ -0.09
CDH5-208ENST00000614547 DNMT1P26358 1616 aaKnown RBP14.51□□□□□ -0.09
CDH5-208ENST00000614547 SAMD9Q5K651 1589 aa14.5□□□□□ -0.09
CDH5-208ENST00000614547 ZHX1Q9UKY1 873 aaPredicted RBP14.5□□□□□ -0.09
CDH5-208ENST00000614547 CHMP3Q9Y3E7 222 aa14.5□□□□□ -0.09
CDH5-208ENST00000614547 COL17A1Q9UMD9 1497 aaPredicted RBP14.5□□□□□ -0.09
CDH5-208ENST00000614547 RILPL2Q969X0 211 aa14.49□□□□□ -0.09
CDH5-208ENST00000614547 FSD2A1L4K1 749 aa14.49□□□□□ -0.09
CDH5-208ENST00000614547 BAG4O95429 457 aaKnown RBP14.49□□□□□ -0.09
CDH5-208ENST00000614547 FBXO31Q5XUX0 539 aaPredicted RBP14.49□□□□□ -0.09
CDH5-208ENST00000614547 TRAPPC8Q9Y2L5 1435 aa14.48□□□□□ -0.09
CDH5-208ENST00000614547 MAGI2Q86UL8 1455 aa14.48□□□□□ -0.09
CDH5-208ENST00000614547 CDC45O75419 566 aa14.48□□□□□ -0.09
CDH5-208ENST00000614547 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
CDH5-208ENST00000614547 GPRASP1Q5JY77 1395 aa14.48□□□□□ -0.09
CDH5-208ENST00000614547 MBD5Q9P267 1494 aa14.48□□□□□ -0.09
CDH5-208ENST00000614547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.48□□□□□ -0.09
CDH5-208ENST00000614547 TMPOP42166 694 aaKnown RBP14.48□□□□□ -0.09
CDH5-208ENST00000614547 TAOK2Q9UL54 1235 aa14.48□□□□□ -0.09
CDH5-208ENST00000614547 DIAPH1O60610 1272 aaKnown RBP14.47□□□□□ -0.09
CDH5-208ENST00000614547 A2MP01023 1474 aa14.47□□□□□ -0.09
CDH5-208ENST00000614547 PDCL3Q9H2J4 239 aa14.47□□□□□ -0.09
CDH5-208ENST00000614547 KIF16BQ96L93 1317 aa14.47□□□□□ -0.09
CDH5-208ENST00000614547 FAM177BA6PVY3 158 aa14.47□□□□□ -0.09
CDH5-208ENST00000614547 SMARCA5O60264 1052 aaPredicted RBP14.47□□□□□ -0.09
CDH5-208ENST00000614547 CD2BP2O95400 341 aaKnown RBP14.47□□□□□ -0.09
CDH5-208ENST00000614547 GDPD2Q9HCC8 539 aa14.47□□□□□ -0.09
CDH5-208ENST00000614547 PRKAR2BP31323 418 aa14.46□□□□□ -0.09
CDH5-208ENST00000614547 NEK4P51957 841 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms