RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 REREQ9P2R6 1566 aa15.77■□□□□ 0.11
TUBD1-216ENST00000613721 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.11
TUBD1-216ENST00000613721 STK26Q9P289 416 aa15.76■□□□□ 0.11
TUBD1-216ENST00000613721 ZNF521Q96K83 1311 aa15.75■□□□□ 0.11
TUBD1-216ENST00000613721 CARD14Q9BXL6 1004 aa15.75■□□□□ 0.11
TUBD1-216ENST00000613721 SLC52A1Q9NWF4 448 aa15.75■□□□□ 0.11
TUBD1-216ENST00000613721 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
TUBD1-216ENST00000613721 PLIN1O60240 522 aa15.74■□□□□ 0.11
TUBD1-216ENST00000613721 GOLGA2Q08379 1002 aa15.73■□□□□ 0.11
TUBD1-216ENST00000613721 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
TUBD1-216ENST00000613721 DUSP27Q5VZP5 1158 aa15.73■□□□□ 0.11
TUBD1-216ENST00000613721 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
TUBD1-216ENST00000613721 NSD3Q9BZ95 1437 aa15.71■□□□□ 0.11
TUBD1-216ENST00000613721 USP32Q8NFA0 1604 aa15.71■□□□□ 0.11
TUBD1-216ENST00000613721 CCDC146Q8IYE0 955 aa15.7■□□□□ 0.1
TUBD1-216ENST00000613721 CRBNQ96SW2 442 aa15.7■□□□□ 0.1
TUBD1-216ENST00000613721 ZMYM3Q14202 1370 aa15.7■□□□□ 0.1
TUBD1-216ENST00000613721 CEBPAP49715 358 aaPredicted RBP15.7■□□□□ 0.1
TUBD1-216ENST00000613721 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
TUBD1-216ENST00000613721 ESF1Q9H501 851 aaKnown RBP15.69■□□□□ 0.1
TUBD1-216ENST00000613721 TCERG1O14776 1098 aaKnown RBP15.69■□□□□ 0.1
TUBD1-216ENST00000613721 SLFN5Q08AF3 891 aa15.68■□□□□ 0.1
TUBD1-216ENST00000613721 SPATA31D1Q6ZQQ2 1576 aa15.68■□□□□ 0.1
TUBD1-216ENST00000613721 SHPRHQ149N8 1683 aa15.68■□□□□ 0.1
TUBD1-216ENST00000613721 APAF1O14727 1248 aa15.68■□□□□ 0.1
TUBD1-216ENST00000613721 ANP32AP39687 249 aaKnown RBP15.67■□□□□ 0.1
TUBD1-216ENST00000613721 A2ML1A8K2U0 1454 aa15.67■□□□□ 0.1
TUBD1-216ENST00000613721 NGEFQ8N5V2 710 aa15.66■□□□□ 0.1
TUBD1-216ENST00000613721 SLC12A5Q9H2X9 1139 aa15.66■□□□□ 0.1
TUBD1-216ENST00000613721 TULP4Q9NRJ4 1543 aa15.66■□□□□ 0.1
TUBD1-216ENST00000613721 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.66■□□□□ 0.1
TUBD1-216ENST00000613721 NKTRP30414 1462 aaKnown RBP15.65■□□□□ 0.1
TUBD1-216ENST00000613721 C20orf194Q5TEA3 1177 aa15.65■□□□□ 0.1
TUBD1-216ENST00000613721 MORC1Q86VD1 984 aa15.65■□□□□ 0.1
TUBD1-216ENST00000613721 TRMT2AQ8IZ69 625 aaKnown RBP15.65■□□□□ 0.1
TUBD1-216ENST00000613721 CABP2Q9NPB3 220 aa15.65■□□□□ 0.1
TUBD1-216ENST00000613721 NOP58Q9Y2X3 529 aaKnown RBP15.65■□□□□ 0.1
TUBD1-216ENST00000613721 EVC2Q86UK5 1308 aa15.64■□□□□ 0.09
TUBD1-216ENST00000613721 ZFYVE9O95405 1425 aa15.64■□□□□ 0.09
TUBD1-216ENST00000613721 RIMS2Q9UQ26 1411 aa15.64■□□□□ 0.09
TUBD1-216ENST00000613721 MS4A1P11836 297 aa15.63■□□□□ 0.09
TUBD1-216ENST00000613721 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
TUBD1-216ENST00000613721 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
TUBD1-216ENST00000613721 E9PSI1 815 aa15.63■□□□□ 0.09
TUBD1-216ENST00000613721 ALKQ9UM73 1620 aa15.62■□□□□ 0.09
TUBD1-216ENST00000613721 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
TUBD1-216ENST00000613721 CGNL1Q0VF96 1302 aa15.62■□□□□ 0.09
TUBD1-216ENST00000613721 PTPRMP28827 1452 aa15.62■□□□□ 0.09
TUBD1-216ENST00000613721 ANKRD36BQ8N2N9 1353 aa15.61■□□□□ 0.09
TUBD1-216ENST00000613721 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
TUBD1-216ENST00000613721 IPO9Q96P70 1041 aaKnown RBP15.6■□□□□ 0.09
TUBD1-216ENST00000613721 TNNT2P45379 298 aaPredicted RBP15.6■□□□□ 0.09
TUBD1-216ENST00000613721 WAPLQ7Z5K2 1190 aa15.6■□□□□ 0.09
TUBD1-216ENST00000613721 YTHDC2Q9H6S0 1430 aaKnown RBP15.6■□□□□ 0.09
TUBD1-216ENST00000613721 NSD2O96028 1365 aa15.6■□□□□ 0.09
TUBD1-216ENST00000613721 TNRQ92752 1358 aa15.6■□□□□ 0.09
TUBD1-216ENST00000613721 PDE4AP27815 886 aa15.59■□□□□ 0.09
TUBD1-216ENST00000613721 KDM2BQ8NHM5 1336 aa15.58■□□□□ 0.08
TUBD1-216ENST00000613721 IQSEC2Q5JU85 1478 aa15.58■□□□□ 0.08
TUBD1-216ENST00000613721 BACH2Q9BYV9 841 aa15.58■□□□□ 0.08
TUBD1-216ENST00000613721 POGKQ9P215 609 aa15.58■□□□□ 0.08
TUBD1-216ENST00000613721 CENPQQ7L2Z9 268 aaPredicted RBP15.57■□□□□ 0.08
TUBD1-216ENST00000613721 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
TUBD1-216ENST00000613721 CFAP53Q96M91 514 aa15.56■□□□□ 0.08
TUBD1-216ENST00000613721 NINLQ9Y2I6 1382 aa15.56■□□□□ 0.08
TUBD1-216ENST00000613721 PAK3O75914 559 aaPredicted RBP15.56■□□□□ 0.08
TUBD1-216ENST00000613721 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
TUBD1-216ENST00000613721 RUNDC1Q96C34 613 aa15.56■□□□□ 0.08
TUBD1-216ENST00000613721 METP08581 1390 aa15.56■□□□□ 0.08
TUBD1-216ENST00000613721 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
TUBD1-216ENST00000613721 MTHFSP49914 203 aa15.55■□□□□ 0.08
TUBD1-216ENST00000613721 SETD1AO15047 1707 aaKnown RBP15.55■□□□□ 0.08
TUBD1-216ENST00000613721 ZBTB47Q9UFB7 747 aaPredicted RBP15.54■□□□□ 0.08
TUBD1-216ENST00000613721 BCAR3O75815 825 aa15.53■□□□□ 0.08
TUBD1-216ENST00000613721 A0A1W2PP64 1363 aa15.53■□□□□ 0.08
TUBD1-216ENST00000613721 UBR1Q8IWV7 1749 aa15.53■□□□□ 0.08
TUBD1-216ENST00000613721 ANKRD26Q9UPS8 1709 aa15.53■□□□□ 0.08
TUBD1-216ENST00000613721 NPM2Q86SE8 214 aaKnown RBP15.53■□□□□ 0.08
TUBD1-216ENST00000613721 ABCC11Q96J66 1382 aa15.52■□□□□ 0.08
TUBD1-216ENST00000613721 LTKP29376 864 aa15.52■□□□□ 0.08
TUBD1-216ENST00000613721 TXNDC2Q86VQ3 553 aa15.52■□□□□ 0.08
TUBD1-216ENST00000613721 SKAP1Q86WV1 359 aa15.52■□□□□ 0.08
TUBD1-216ENST00000613721 TCP11L2Q8N4U5 519 aa15.52■□□□□ 0.08
TUBD1-216ENST00000613721 C3P01024 1663 aa15.52■□□□□ 0.07
TUBD1-216ENST00000613721 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
TUBD1-216ENST00000613721 FER1L4A9Z1Z3 1794 aa15.51■□□□□ 0.07
TUBD1-216ENST00000613721 NEUROD2Q15784 382 aa15.51■□□□□ 0.07
TUBD1-216ENST00000613721 CDK19Q9BWU1 502 aa15.51■□□□□ 0.07
TUBD1-216ENST00000613721 RRP7AQ9Y3A4 280 aaKnown RBP15.51■□□□□ 0.07
TUBD1-216ENST00000613721 ADGRB2O60241 1585 aa15.5■□□□□ 0.07
TUBD1-216ENST00000613721 TMEM2Q9UHN6 1383 aa15.5■□□□□ 0.07
TUBD1-216ENST00000613721 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
TUBD1-216ENST00000613721 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
TUBD1-216ENST00000613721 PDE3AQ14432 1141 aa15.48■□□□□ 0.07
TUBD1-216ENST00000613721 CCDC27Q2M243 656 aa15.48■□□□□ 0.07
TUBD1-216ENST00000613721 SLC26A8Q96RN1 970 aa15.48■□□□□ 0.07
TUBD1-216ENST00000613721 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
TUBD1-216ENST00000613721 CACNB1Q02641 598 aaPredicted RBP15.48■□□□□ 0.07
TUBD1-216ENST00000613721 MED14O60244 1454 aa15.47■□□□□ 0.07
TUBD1-216ENST00000613721 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms